Miyakogusa Predicted Gene
- Lj3g3v0527350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0527350.1 tr|D7KV18|D7KV18_ARALL F1N21.14 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_315746 PE=4
SV=1,49.45,1e-17,zf-RanBP,Zinc finger, RanBP2-type; Ran BP2/NZF zinc
finger-like,NULL; Zinc finger domain,Zinc finger,CUFF.40935.1
(244 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g37750.1 355 2e-98
Glyma18g48760.1 328 3e-90
Glyma09g37750.2 268 3e-72
Glyma11g36990.1 152 2e-37
Glyma11g36990.2 150 1e-36
Glyma18g00920.1 150 1e-36
Glyma11g36990.3 105 3e-23
Glyma18g00920.2 100 2e-21
Glyma16g09080.1 76 4e-14
Glyma09g30770.1 49 7e-06
>Glyma09g37750.1
Length = 247
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/248 (73%), Positives = 202/248 (81%), Gaps = 6/248 (2%)
Query: 1 MASPMDGNRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP--PITP 58
MAS NRGS GSKR RND SRKDGDW+CPNCGNLNFSFRTVCN+GHCGAPRP ITP
Sbjct: 1 MASTKVNNRGSPGSKRFRNDASRKDGDWTCPNCGNLNFSFRTVCNQGHCGAPRPSLTITP 60
Query: 59 PAQVMSPYNNGHPQFYYGGVVAPPPLYGVSSRFGSPLPHSGVQYDYGLYPRPRVSYSPIP 118
PA ++SPY N HP FY+GG PPP YG+ S+FGSP+PH G+QYDYGLY R R YSP+P
Sbjct: 61 PAPIISPYRNSHP-FYHGGFGIPPPSYGIPSQFGSPIPHPGLQYDYGLYARARAPYSPLP 119
Query: 119 PFLPGSFGGIAYSPRPKINPYGYGFQS--PTWDMGLVTDNSASRKRRGGPDGLSEGDWIC 176
F P SFGGI Y PRP+I+ YGYGFQS P W GLV DN ASRKRRGGPDGLSEGDWIC
Sbjct: 120 MFPPASFGGINYGPRPRIDGYGYGFQSPPPPWAEGLVADNFASRKRRGGPDGLSEGDWIC 179
Query: 177 PKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS-IPEGSWTCKKCGNLNYPFRSVCNRKDC 235
P+CDNVNFAFRT CN+KHCGA K ++ NT+ IPEGSWTC+KCGNLNYPFR+VCNRKDC
Sbjct: 180 PRCDNVNFAFRTTCNIKHCGAVKPSSNKPNTAVIPEGSWTCEKCGNLNYPFRNVCNRKDC 239
Query: 236 GSEKTASA 243
+EKT SA
Sbjct: 240 RNEKTVSA 247
>Glyma18g48760.1
Length = 247
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/248 (71%), Positives = 199/248 (80%), Gaps = 6/248 (2%)
Query: 1 MASPMDGNRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRPPITPPA 60
MAS NRGS GSKR RND SRKDGDW+CPNCGNLNFSFRTVCN+G CGAPRPP+TPPA
Sbjct: 1 MASTKVNNRGSPGSKRFRNDASRKDGDWTCPNCGNLNFSFRTVCNQGRCGAPRPPLTPPA 60
Query: 61 QVMSPYNNGHPQFYYGGVVAPPPLYGVSSRFGSPLPHSGVQYDYGLYPRPRVSYSPIPPF 120
++SPY N HP FYYGGV PPP YG+ S+FGSP+PH G+QYDYGLY R R YSP+P F
Sbjct: 61 PIISPYRNSHP-FYYGGVGIPPPSYGMPSQFGSPIPHPGIQYDYGLYARARAPYSPLPMF 119
Query: 121 LPGSFGGIAYSPRPKIN--PYGYGFQS--PTWDMGLVTDNSASRKRRGGPDGLSEGDWIC 176
P SFGGI Y PRP+I+ YGYGFQS P W GL+ DN ASRKRRGGPDGL EGDWIC
Sbjct: 120 PPASFGGINYGPRPRIDGYGYGYGFQSPPPPWVEGLIADNFASRKRRGGPDGLFEGDWIC 179
Query: 177 PKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS-IPEGSWTCKKCGNLNYPFRSVCNRKDC 235
PKCDNVNF+FRT CN+KHCG K ++ N + +PEGSWTC+KC NLNYPFR+VCNRKDC
Sbjct: 180 PKCDNVNFSFRTTCNIKHCGVVKPNTNKPNAAVVPEGSWTCEKCSNLNYPFRNVCNRKDC 239
Query: 236 GSEKTASA 243
+EKT SA
Sbjct: 240 RTEKTVSA 247
>Glyma09g37750.2
Length = 230
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 153/190 (80%), Gaps = 4/190 (2%)
Query: 57 TPPAQVMSPYNNGHPQFYYGGVVAPPPLYGVSSRFGSPLPHSGVQYDYGLYPRPRVSYSP 116
T PA ++SPY N HP FY+GG PPP YG+ S+FGSP+PH G+QYDYGLY R R YSP
Sbjct: 42 TTPAPIISPYRNSHP-FYHGGFGIPPPSYGIPSQFGSPIPHPGLQYDYGLYARARAPYSP 100
Query: 117 IPPFLPGSFGGIAYSPRPKINPYGYGFQS--PTWDMGLVTDNSASRKRRGGPDGLSEGDW 174
+P F P SFGGI Y PRP+I+ YGYGFQS P W GLV DN ASRKRRGGPDGLSEGDW
Sbjct: 101 LPMFPPASFGGINYGPRPRIDGYGYGFQSPPPPWAEGLVADNFASRKRRGGPDGLSEGDW 160
Query: 175 ICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS-IPEGSWTCKKCGNLNYPFRSVCNRK 233
ICP+CDNVNFAFRT CN+KHCGA K ++ NT+ IPEGSWTC+KCGNLNYPFR+VCNRK
Sbjct: 161 ICPRCDNVNFAFRTTCNIKHCGAVKPSSNKPNTAVIPEGSWTCEKCGNLNYPFRNVCNRK 220
Query: 234 DCGSEKTASA 243
DC +EKT SA
Sbjct: 221 DCRNEKTVSA 230
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 11 SFGSKRSRNDVS-RKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRPPITPPAQVMSP 65
+F S++ R +GDW CP C N+NF+FRT CN HCGA +P P + P
Sbjct: 142 NFASRKRRGGPDGLSEGDWICPRCDNVNFAFRTTCNIKHCGAVKPSSNKPNTAVIP 197
>Glyma11g36990.1
Length = 285
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 143/276 (51%), Gaps = 49/276 (17%)
Query: 8 NRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP----------PIT 57
NR S +KR+R D SR++ DW+CP+CGN+NFSFRT CN +C PRP P+
Sbjct: 6 NRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQ 65
Query: 58 PPAQVMS--PY-NNGHPQFYYGGVVAPPPLYGVSSRFGSPLP--------HSGVQYDYGL 106
P S PY + P Y GV P YG S GS +P S Y+YG
Sbjct: 66 APQGYSSSAPYLGSNTPSSIYLGV----PPYGSSLFNGSSVPPYDVPFSGGSAYHYNYGS 121
Query: 107 YPRPRVSYSPI-----PPFLPGSF---GGIAYSPRPKINPYGYGFQSPTWDM----GLVT 154
Y P+ P+ G GGI P+ ++ YG G M G
Sbjct: 122 RLSAGSPYRPLHLSGPTPYTGGPVIGNGGIYGMPQ-LLDRYGLGIPIGPGTMGARPGFFH 180
Query: 155 DNSASRKRRGGPDGLSEGDWICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS------ 208
D+ + +K G D + DW CPKC NVNF+FRT CNM+ C PK G SQA+ S
Sbjct: 181 DDKSQKK---GTDATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPG-SQASKSDKNSKQ 236
Query: 209 -IPEGSWTCKKCGNLNYPFRSVCNRKDCGSEKTASA 243
+PEGSW C+KC N+NYPFR+ CNR++CG++K A +
Sbjct: 237 KMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAES 272
>Glyma11g36990.2
Length = 283
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 142/276 (51%), Gaps = 51/276 (18%)
Query: 8 NRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP----------PIT 57
NR S +KR+R D SR++ DW+CP+CGN+NFSFRT CN +C PRP P+
Sbjct: 6 NRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQ 65
Query: 58 PPAQVMS--PY-NNGHPQFYYGGVVAPPPLYGVSSRFGSPLP--------HSGVQYDYGL 106
P S PY + P Y GV P YG S GS +P S Y+YG
Sbjct: 66 APQGYSSSAPYLGSNTPSSIYLGV----PPYGSSLFNGSSVPPYDVPFSGGSAYHYNYGS 121
Query: 107 YPRPRVSYSPI-----PPFLPGSF---GGIAYSPRPKINPYGYGFQSPTWDM----GLVT 154
Y P+ P+ G GGI P+ ++ YG G M G
Sbjct: 122 RLSAGSPYRPLHLSGPTPYTGGPVIGNGGIYGMPQ-LLDRYGLGIPIGPGTMGARPGFFH 180
Query: 155 DNSASRKRRGGPDGLSEGDWICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS------ 208
D+ + +K D + DW CPKC NVNF+FRT CNM+ C PK G SQA+ S
Sbjct: 181 DDKSQKK-----DATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPG-SQASKSDKNSKQ 234
Query: 209 -IPEGSWTCKKCGNLNYPFRSVCNRKDCGSEKTASA 243
+PEGSW C+KC N+NYPFR+ CNR++CG++K A +
Sbjct: 235 KMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAES 270
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 5 MDGNRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP 54
M G F +S+ + +D DW+CP CGN+NFSFRTVCN C P+P
Sbjct: 172 MGARPGFFHDDKSQKKDATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKP 221
>Glyma18g00920.1
Length = 283
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 142/276 (51%), Gaps = 51/276 (18%)
Query: 8 NRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP----------PIT 57
NR S +KR+R D SR++ DW+CP+CGN+NFSFRT CN +C PRP P+
Sbjct: 6 NRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQ 65
Query: 58 PPAQVMS--PY-NNGHPQFYYGGVVAPPPLYGVSSRFGSPLP--------HSGVQYDYGL 106
P S PY + P Y GV P YG S GS +P S Y+YG
Sbjct: 66 APQGYSSSAPYLGSNTPSSIYLGV----PPYGSSLFNGSSVPPYDVPFSGGSAYHYNYGS 121
Query: 107 YPRPRVSYSPI-----PPFLPGSF---GGIAYSPRPKINPYGYGFQSPTWDM----GLVT 154
Y P+ P+ G GGI P+ ++ YG G M G
Sbjct: 122 RLSAGSPYRPLHLSGPTPYTGGPVMGNGGIYGMPQ-LLDRYGLGVPIGPGTMGARPGFFH 180
Query: 155 DNSASRKRRGGPDGLSEGDWICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS------ 208
D+ + +K D + DW CPKC NVNF+FRT CNM+ C PK G SQA+ S
Sbjct: 181 DDKSQKK-----DATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKPG-SQASKSDKNSKQ 234
Query: 209 -IPEGSWTCKKCGNLNYPFRSVCNRKDCGSEKTASA 243
+PEGSW C+KC N+NYPFR+ CNR++CG++K A +
Sbjct: 235 KMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAES 270
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 5 MDGNRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP 54
M G F +S+ + +D DW+CP CGN+NFSFRT+CN C P+P
Sbjct: 172 MGARPGFFHDDKSQKKDATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKP 221
>Glyma11g36990.3
Length = 234
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 112/234 (47%), Gaps = 44/234 (18%)
Query: 8 NRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP----------PIT 57
NR S +KR+R D SR++ DW+CP+CGN+NFSFRT CN +C PRP P+
Sbjct: 6 NRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQ 65
Query: 58 PPAQVMS--PY-NNGHPQFYYGGVVAPPPLYGVSSRFGSPLP--------HSGVQYDYGL 106
P S PY + P Y GV P YG S GS +P S Y+YG
Sbjct: 66 APQGYSSSAPYLGSNTPSSIYLGV----PPYGSSLFNGSSVPPYDVPFSGGSAYHYNYGS 121
Query: 107 YPRPRVSYSPI-----PPFLPGSF---GGIAYSPRPKINPYGYGFQSPTWDM----GLVT 154
Y P+ P+ G GGI P+ ++ YG G M G
Sbjct: 122 RLSAGSPYRPLHLSGPTPYTGGPVIGNGGIYGMPQ-LLDRYGLGIPIGPGTMGARPGFFH 180
Query: 155 DNSASRKRRGGPDGLSEGDWICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS 208
D+ + +K D + DW CPKC NVNF+FRT CNM+ C PK G SQA+ S
Sbjct: 181 DDKSQKK-----DATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPG-SQASKS 228
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 5 MDGNRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP 54
M G F +S+ + +D DW+CP CGN+NFSFRTVCN C P+P
Sbjct: 172 MGARPGFFHDDKSQKKDATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKP 221
>Glyma18g00920.2
Length = 240
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 13/101 (12%)
Query: 151 GLVTDNSASRKRRGGPDGLSEGDWICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS-- 208
G D+ + +K D + DW CPKC NVNF+FRT CNM+ C PK G SQA+ S
Sbjct: 134 GFFHDDKSQKK-----DATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKPG-SQASKSDK 187
Query: 209 -----IPEGSWTCKKCGNLNYPFRSVCNRKDCGSEKTASAN 244
+PEGSW C+KC N+NYPFR+ CNR++CG++K A +
Sbjct: 188 NSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESE 228
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 5 MDGNRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRP 54
M G F +S+ + +D DW+CP CGN+NFSFRT+CN C P+P
Sbjct: 129 MGARPGFFHDDKSQKKDATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKP 178
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 158 ASRKRRGGPDGLSEGDWICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTS 208
AS+ + + EG W C KC+N+N+ FRT CN ++CGA K +S+ + S
Sbjct: 182 ASKSDKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPS 232
>Glyma16g09080.1
Length = 72
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 8/70 (11%)
Query: 1 MASPMDGNRGSFGSKRSRNDVSRKDGDWSCPNCGNLNFSFRTVCNRGHCGAPRPPITPPA 60
M S MD + S SRKDGDW+CPNCGNL FSFRTVCN+GHCGAPRP +T
Sbjct: 6 MTSCMDLVKIVIFLLES---ASRKDGDWTCPNCGNLIFSFRTVCNQGHCGAPRPSLT--- 59
Query: 61 QVMSPYNNGH 70
++P NG
Sbjct: 60 --LTPVCNGQ 67
>Glyma09g30770.1
Length = 458
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 172 GDWICPKCDNVNFAFRTNCNMKHCGAPKSGKSQANTSIPEGSWTCKKCGNLNYPFRSVCN 231
GDW CP+C+ +NFA T C P + +G WTC +CG +NY + C
Sbjct: 311 GDWTCPECNFLNFARNTRCLKCKTAGPTKEANTNEVERKKGDWTCPQCGFMNYARNTKCL 370
Query: 232 R 232
R
Sbjct: 371 R 371