Miyakogusa Predicted Gene

Lj3g3v0515090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0515090.1 Non Chatacterized Hit- tr|B9RD22|B9RD22_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,53.62,0.0000000000005, ,CUFF.40921.1
         (76 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g14330.1                                                        65   1e-11
Glyma03g26720.1                                                        60   6e-10

>Glyma07g14330.1 
          Length = 560

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 8/79 (10%)

Query: 4  MLFIRHFCSSTTSNLSKK-----PSRYKKVVLVQAQQAITDYLHSTRSIPYAHADQIAKN 58
          M   RH C+ TTS LS       P +YKK  + Q Q+++TDYLH+TR IPYA+AD+IAKN
Sbjct: 1  MSLHRHVCT-TTSKLSAAAAAAIPWKYKKFAIAQGQKSLTDYLHATRCIPYAYADKIAKN 59

Query: 59 SLLTLTNLISKL--GSFTP 75
          SL +LT LI+    GSF+P
Sbjct: 60 SLTSLTTLITTTLGGSFSP 78


>Glyma03g26720.1 
          Length = 469

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/37 (64%), Positives = 32/37 (86%)

Query: 22 PSRYKKVVLVQAQQAITDYLHSTRSIPYAHADQIAKN 58
          P +YKK  + Q Q+++TDYLH+TRSIPYA+A+QIAKN
Sbjct: 4  PWKYKKFAISQGQKSLTDYLHATRSIPYAYANQIAKN 40