Miyakogusa Predicted Gene

Lj3g3v0478010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0478010.1 Non Chatacterized Hit- tr|I3SC15|I3SC15_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,96.51,2e-38,U6
SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7,NULL; SMALL NUCLEAR
RIBONUCLEOPROTEIN,NULL; Sm-like ribonuc,CUFF.40880.1
         (86 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g28190.1                                                       167   2e-42
Glyma08g11160.1                                                       166   6e-42
Glyma11g09150.1                                                        60   5e-10
Glyma19g38130.1                                                        59   2e-09
Glyma03g35490.1                                                        59   2e-09

>Glyma05g28190.1 
          Length = 141

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/86 (97%), Positives = 85/86 (98%)

Query: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
Sbjct: 43  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 102

Query: 61  TAQTRSLGLIVCRGTAVMLVSPTDGT 86
           T QTR+LGLIVCRGTAVMLVSPTDGT
Sbjct: 103 TDQTRNLGLIVCRGTAVMLVSPTDGT 128


>Glyma08g11160.1 
          Length = 99

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 84/86 (97%), Positives = 85/86 (98%)

Query: 1  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60
          MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
Sbjct: 1  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 61 TAQTRSLGLIVCRGTAVMLVSPTDGT 86
          T QTR+LGLIVCRGTAVMLVSPTDGT
Sbjct: 61 TDQTRNLGLIVCRGTAVMLVSPTDGT 86


>Glyma11g09150.1 
          Length = 79

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 9/72 (12%)

Query: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTAQTRSLGL 69
          DL K++DK +Q+KL G R + GTL+G+DQ +NLV+D  VE             +   +G+
Sbjct: 9  DLKKYMDKKLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59

Query: 70 IVCRGTAVMLVS 81
          +V RG +V+ V 
Sbjct: 60 VVIRGNSVVTVE 71


>Glyma19g38130.1 
          Length = 79

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 9/72 (12%)

Query: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTAQTRSLGL 69
          DL K++DK +Q+KL   R V GTL+G+DQ +NLV+D  VE             +   +G+
Sbjct: 9  DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59

Query: 70 IVCRGTAVMLVS 81
          +V RG +V+ V 
Sbjct: 60 VVIRGNSVVTVE 71


>Glyma03g35490.1 
          Length = 79

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 9/72 (12%)

Query: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTAQTRSLGL 69
          DL K++DK +Q+KL   R V GTL+G+DQ +NLV+D  VE             +   +G+
Sbjct: 9  DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59

Query: 70 IVCRGTAVMLVS 81
          +V RG +V+ V 
Sbjct: 60 VVIRGNSVVTVE 71