Miyakogusa Predicted Gene

Lj3g3v0463540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0463540.1 Non Chatacterized Hit- tr|D8SBK6|D8SBK6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.59,0.006,seg,NULL,CUFF.40849.1
         (237 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g23780.1                                                       303   1e-82
Glyma09g12180.1                                                       270   1e-72
Glyma15g23780.2                                                       211   6e-55

>Glyma15g23780.1 
          Length = 224

 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/206 (73%), Positives = 172/206 (83%), Gaps = 10/206 (4%)

Query: 32  FINHEIEAMERQIGAIRAVRDVKIENLLTELRLLRSCFSEEQLTKPVLEVFEETLPNLEI 91
           FI+ EI+AMERQIGAIRAVRDV+IE+LLTELR LRS FS E+L KPVL+VFEETLPNL +
Sbjct: 29  FIDLEIQAMERQIGAIRAVRDVEIEHLLTELRFLRSRFSSEELRKPVLQVFEETLPNLAV 88

Query: 92  VSDEGSKKFEVAWKEKESMNMSCADGRDLHVSLLQRLSMAYPQCSASVPHLGGFEYSSNA 151
           V+DE SKK EV W+E E     C DG DLH SLLQRLSMA      S+P   GFEYS+N 
Sbjct: 89  VNDERSKKLEVKWRETEG----CNDGVDLHASLLQRLSMA------SIPRFPGFEYSTNE 138

Query: 152 GGTSFLGADNVHLKDMVFEAPSETQTLAMQEGLQTPGVTSQRLSVGMTPKTLRLPKPGEM 211
           G  SF+GAD++H KD+  E PS+TQTLA+QEGLQTPGVTSQRLSVGMTPKTLRLPKPGEM
Sbjct: 139 GRMSFIGADDLHFKDIALEEPSDTQTLAVQEGLQTPGVTSQRLSVGMTPKTLRLPKPGEM 198

Query: 212 LLSVHGSPLGVFKENNMEAINESEEG 237
           LLSVHGSPLGV+K+NNMEAI+ESEEG
Sbjct: 199 LLSVHGSPLGVYKDNNMEAIHESEEG 224


>Glyma09g12180.1 
          Length = 260

 Score =  270 bits (689), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/248 (60%), Positives = 175/248 (70%), Gaps = 29/248 (11%)

Query: 1   MPRRXXXXXXVKPLPEPNDPQIQTQQQNHTHFINHEIEAMERQIGAIRAVRDVKIENLLT 60
           MP+R       K      +PQ QTQ      FI+ EI+AM+RQI AIRAVRDV+IE+LLT
Sbjct: 1   MPKRGRTKKTAKATESVTEPQSQTQA---PQFIDLEIQAMQRQIDAIRAVRDVEIEHLLT 57

Query: 61  ELRLLRSCFSEEQLTKPVLEVFEETLPNLEIVSD-EGSKKFEVAWKEKESMNMSCADGRD 119
           ELR LRS F  E+L KPVL VFEETLPNL +V + E +K  EV W+E E     C DG +
Sbjct: 58  ELRFLRSRFDGEELRKPVLHVFEETLPNLAVVVNGECNKNLEVKWRETEG----CNDGVN 113

Query: 120 LHVSLLQRLSMAYPQCSASVPHLGGFEYSSN------AGGTSFLGADNVHLKDMV----- 168
           LH SLLQRLS+A      S+P   GFEYS+N      AG  SF+GAD++H KD+V     
Sbjct: 114 LHASLLQRLSIA------SIPRFPGFEYSTNEGASLMAGRMSFIGADDLHFKDIVCLLSF 167

Query: 169 ----FEAPSETQTLAMQEGLQTPGVTSQRLSVGMTPKTLRLPKPGEMLLSVHGSPLGVFK 224
                E PS+TQTLA+QEGLQTPGVTSQRLSVGMTPKTLRLPKPGEMLLSVHGSPLGV+K
Sbjct: 168 QFSALEEPSDTQTLAVQEGLQTPGVTSQRLSVGMTPKTLRLPKPGEMLLSVHGSPLGVYK 227

Query: 225 ENNMEAIN 232
           +NNMEAI+
Sbjct: 228 DNNMEAIH 235


>Glyma15g23780.2 
          Length = 200

 Score =  211 bits (537), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 107/158 (67%), Positives = 124/158 (78%), Gaps = 10/158 (6%)

Query: 32  FINHEIEAMERQIGAIRAVRDVKIENLLTELRLLRSCFSEEQLTKPVLEVFEETLPNLEI 91
           FI+ EI+AMERQIGAIRAVRDV+IE+LLTELR LRS FS E+L KPVL+VFEETLPNL +
Sbjct: 29  FIDLEIQAMERQIGAIRAVRDVEIEHLLTELRFLRSRFSSEELRKPVLQVFEETLPNLAV 88

Query: 92  VSDEGSKKFEVAWKEKESMNMSCADGRDLHVSLLQRLSMAYPQCSASVPHLGGFEYSSNA 151
           V+DE SKK EV W+E E     C DG DLH SLLQRLSM      AS+P   GFEYS+N 
Sbjct: 89  VNDERSKKLEVKWRETE----GCNDGVDLHASLLQRLSM------ASIPRFPGFEYSTNE 138

Query: 152 GGTSFLGADNVHLKDMVFEAPSETQTLAMQEGLQTPGV 189
           G  SF+GAD++H KD+  E PS+TQTLA+QEGLQTPGV
Sbjct: 139 GRMSFIGADDLHFKDIALEEPSDTQTLAVQEGLQTPGV 176