Miyakogusa Predicted Gene

Lj3g3v0462270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0462270.1 tr|B9IKL1|B9IKL1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_809065 PE=4
SV=1,71.29,0,SUBFAMILY NOT NAMED,NULL; D-LACTATE DEHYDROGENASE,NULL;
FAD_binding_4,FAD linked oxidase,
N-terminal,NODE_60405_length_616_cov_127.275970.path2.1
         (200 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g02250.1                                                       198   3e-51
Glyma03g42160.1                                                       196   1e-50
Glyma07g05690.1                                                       196   2e-50
Glyma16g02280.1                                                       193   9e-50
Glyma19g44870.1                                                       192   1e-49
Glyma16g02270.1                                                       189   1e-48
Glyma19g44880.1                                                       189   2e-48
Glyma17g28450.1                                                       145   3e-35
Glyma02g27260.1                                                        48   6e-06
Glyma02g27260.2                                                        48   7e-06

>Glyma16g02250.1 
          Length = 585

 Score =  198 bits (503), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 103/201 (51%), Positives = 137/201 (68%), Gaps = 4/201 (1%)

Query: 3   PESPVQC---NQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKV 59
           PE P++C     + CT+ NSYG + DR  C A  V YPTTEQ+L S V+ A +N  K+KV
Sbjct: 31  PEDPIKCATSENTTCTITNSYGAFPDRSICKAAQVLYPTTEQELVSVVASATRNKTKMKV 90

Query: 60  VTKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGG 119
            T+FSH+IPKL CP  + N LLIST+  +  +++D     +TV SGV L++LI+E  + G
Sbjct: 91  ATRFSHSIPKLVCPEGE-NGLLISTKYLNKILKVDVETRTMTVESGVTLQQLINEAAKVG 149

Query: 120 FSLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLK 179
            +L  APYW G+++GGL+ TGAHGS+  GKG AVHD+V+GI IV PA   +GYAKV  L 
Sbjct: 150 LALPYAPYWWGLTIGGLMGTGAHGSTLRGKGSAVHDYVVGIRIVRPAGSEDGYAKVEILN 209

Query: 180 APDPLLNAAKLSLGVLGAISK 200
                L+AAK+SLGVLG IS+
Sbjct: 210 EQHQDLSAAKVSLGVLGVISQ 230


>Glyma03g42160.1 
          Length = 577

 Score =  196 bits (499), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 101/201 (50%), Positives = 135/201 (67%), Gaps = 4/201 (1%)

Query: 3   PESPVQCN--QSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVV 60
           PE P+QC+   + CT+ N+YG + DR  CHA  V YP TE++L SAV+ A +N  KVK  
Sbjct: 11  PEDPIQCSSKNTDCTITNTYGVFPDRSICHAAEVIYPNTEEELISAVASASKNKRKVKAA 70

Query: 61  TKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGF 120
           T+FSH+IPKL CP  +   LLIST+  +  ++ID     +TV SGV LR +I +    G 
Sbjct: 71  TRFSHSIPKLVCPDGEKG-LLISTKNLNKVLKIDKEARTMTVQSGVSLREIISKSAEAGL 129

Query: 121 SLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKL-K 179
           +L   PYW G+++GGL+ TGAHGS+ WGKG AVH++VL I IV PA   +GYAKV  L +
Sbjct: 130 ALPYTPYWWGLTIGGLMGTGAHGSTLWGKGSAVHEYVLQIRIVTPAGPEDGYAKVRNLDE 189

Query: 180 APDPLLNAAKLSLGVLGAISK 200
           +    LNAA++SLGVLG IS+
Sbjct: 190 SHQQHLNAARVSLGVLGVISQ 210


>Glyma07g05690.1 
          Length = 578

 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/201 (49%), Positives = 136/201 (67%), Gaps = 4/201 (1%)

Query: 3   PESPVQCNQS---GCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKV 59
           PE P++C  S    CT+ NSYG++ DR  C A  V YPTTEQ+L S V+ A +N  K+K+
Sbjct: 24  PEDPIKCTTSENTTCTITNSYGSFPDRSICKAAQVLYPTTEQELVSVVASATRNKTKMKI 83

Query: 60  VTKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGG 119
            T++SH+IPKL CP  + N +LIST+  +  +++D     +TV SGV L++ I+E  + G
Sbjct: 84  ATRYSHSIPKLVCPDGE-NGMLISTKYLNKIVKVDVEANTMTVESGVTLQQFINEAAKVG 142

Query: 120 FSLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLK 179
            +L  APYW GV++GGL+ TGAHGS+  GKG AVHD+V+G+ IV PA   +GYAKV  L 
Sbjct: 143 LALPYAPYWWGVTIGGLMGTGAHGSTLRGKGSAVHDYVVGLRIVRPAGHEDGYAKVESLN 202

Query: 180 APDPLLNAAKLSLGVLGAISK 200
                LNA K+SLGVLG IS+
Sbjct: 203 ERHEDLNATKVSLGVLGVISQ 223


>Glyma16g02280.1 
          Length = 592

 Score =  193 bits (491), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 99/201 (49%), Positives = 135/201 (67%), Gaps = 4/201 (1%)

Query: 3   PESPVQCNQS---GCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKV 59
           PE P++C+ S    CT+ NSYG + DR  C A  V YPT+EQ+L S V+ A +N  K+KV
Sbjct: 36  PEDPIKCSNSKNTSCTITNSYGMFPDRSICKASQVLYPTSEQELVSVVASATRNKTKMKV 95

Query: 60  VTKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGG 119
            T++SH+IPKL CP  + N LLIST+  +   ++D     +TV SGV +++LI+E  + G
Sbjct: 96  ATRYSHSIPKLVCPEGE-NGLLISTKYLNKIAKVDVEARTMTVESGVTMKQLINEAAKVG 154

Query: 120 FSLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLK 179
            +L  APYW G+++GGL+ TGAHGS+ WGKG +VHD+V+ + IV  A   EGYAK   L 
Sbjct: 155 LALPYAPYWWGLTIGGLMGTGAHGSTLWGKGSSVHDYVVELRIVRAAGPEEGYAKAESLN 214

Query: 180 APDPLLNAAKLSLGVLGAISK 200
                LNAAK+SLGVLG IS+
Sbjct: 215 EQHEDLNAAKVSLGVLGVISQ 235


>Glyma19g44870.1 
          Length = 589

 Score =  192 bits (489), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 4/201 (1%)

Query: 3   PESPVQCN--QSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVV 60
           PE P++C+   + CT+ N+YG + DR  CHA  V YP TE++L SAV+ A +N  KVK  
Sbjct: 20  PEDPIRCSSKNTDCTITNTYGVFPDRSICHAGEVMYPNTEEELISAVASASKNKRKVKAA 79

Query: 61  TKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGF 120
           T+FSH+IPKL CP  + N LLIST+  +  ++ID     +TV SGV LR +I +    G 
Sbjct: 80  TRFSHSIPKLVCPDGE-NGLLISTKNLNKILKIDKEARTMTVQSGVSLREIISKGAEAGL 138

Query: 121 SLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKL-K 179
           +L   PYW G+++GGL+ TGAHGS+ WGKG AVH++V+ + IV PA   +GYAKV  L +
Sbjct: 139 ALPYTPYWWGLTIGGLMGTGAHGSTLWGKGSAVHEYVVELRIVTPAGPEDGYAKVRNLDE 198

Query: 180 APDPLLNAAKLSLGVLGAISK 200
           +    LNAA++SLGVLG IS+
Sbjct: 199 SHQQHLNAARVSLGVLGVISQ 219


>Glyma16g02270.1 
          Length = 553

 Score =  189 bits (481), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/199 (49%), Positives = 133/199 (66%), Gaps = 4/199 (2%)

Query: 5   SPVQC---NQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVVT 61
            P++C     + CT+ NSYG + DR  C A  V YPTTEQ+L S V+ A +N  K+KV T
Sbjct: 1   DPIKCATSENTTCTITNSYGAFPDRSICKAAQVLYPTTEQELVSVVASATRNKTKMKVAT 60

Query: 62  KFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGFS 121
           +FSH+IPKL CP  + N LLIST+  +  +++D     +TV SGV L++LI+E  + G +
Sbjct: 61  RFSHSIPKLVCPEGE-NGLLISTKYLNKILKVDVETRTMTVESGVTLQQLINEAAKVGLA 119

Query: 122 LVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLKAP 181
           L  APYW G+++GGL+ TGAHGS+  GKG AVHD+V+ + IV PA   +GYA V  L   
Sbjct: 120 LPYAPYWWGLTIGGLMGTGAHGSTLRGKGSAVHDYVVELRIVRPAGPEDGYAMVENLNEQ 179

Query: 182 DPLLNAAKLSLGVLGAISK 200
              LNAAK+SLGVLG IS+
Sbjct: 180 HEDLNAAKVSLGVLGVISQ 198


>Glyma19g44880.1 
          Length = 581

 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/202 (49%), Positives = 133/202 (65%), Gaps = 5/202 (2%)

Query: 3   PESPVQC--NQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVV 60
           PE P++C    + CT+ NSYG + DR  C A  V YPT E++L   V+ A Q+  K+KV 
Sbjct: 25  PEDPIKCTSKNTNCTITNSYGIFPDRSICGAEQVFYPTEEEELVKVVASASQSKKKMKVA 84

Query: 61  TKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGF 120
           T+FSH+IPK  CP  Q    LIST+  +  +EI+A    +TV SGV L++LIDE  + G 
Sbjct: 85  TRFSHSIPKWVCPEGQKG-WLISTKYLNRVLEIEAEKRTITVQSGVTLKQLIDEAAKAGL 143

Query: 121 SLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKV--LKL 178
           +L  APYW G+++GG++ TGAHGSS WGKG +VH+ V+ + IV P    +GYAKV  L  
Sbjct: 144 ALPYAPYWWGLTIGGILGTGAHGSSLWGKGSSVHEQVVELRIVRPTGPQDGYAKVHTLSH 203

Query: 179 KAPDPLLNAAKLSLGVLGAISK 200
           +  D  LNAAKLSLG+LG IS+
Sbjct: 204 QEDDQHLNAAKLSLGLLGVISQ 225


>Glyma17g28450.1 
          Length = 464

 Score =  145 bits (366), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/103 (77%), Positives = 94/103 (91%)

Query: 98  LAVTVASGVGLRRLIDEVERGGFSLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHV 157
           +  TV +GVGLR+LI+ VE  GFSLVAAPYWEGV+V GLISTGAHGSSWWGKGG+VHDHV
Sbjct: 1   MTATVDAGVGLRQLINAVEEAGFSLVAAPYWEGVTVAGLISTGAHGSSWWGKGGSVHDHV 60

Query: 158 LGISIVVPASKSEGYAKVLKLKAPDPLLNAAKLSLGVLGAISK 200
           +G+S+VVPASKSEGYAK+L+L+  DP+LNAAK+SLGVLGAISK
Sbjct: 61  VGVSVVVPASKSEGYAKILRLEGQDPMLNAAKVSLGVLGAISK 103


>Glyma02g27260.1 
          Length = 584

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 6/124 (4%)

Query: 77  ANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGFSLVAAPYWEGVSVGGL 136
           + T +++    D  +E+D     V V +G+ +++L+D ++  G +L          +GG+
Sbjct: 138 SRTGMVNLALMDGILEVDKQRKTVRVQAGIRVQQLVDGLKDHGLTLQNFASIREQQIGGI 197

Query: 137 ISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLKAPDPLLNAAKLSLGVLG 196
           I  GAHG+    +   + + V+ + +V PA   +G  ++ K K P+ L   A+  LG LG
Sbjct: 198 IQVGAHGTG--ARLPPIDEQVIAMKLVTPA---KGTIEISKDKDPE-LFYLARCGLGGLG 251

Query: 197 AISK 200
            +++
Sbjct: 252 VVAE 255


>Glyma02g27260.2 
          Length = 492

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 6/124 (4%)

Query: 77  ANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGFSLVAAPYWEGVSVGGL 136
           + T +++    D  +E+D     V V +G+ +++L+D ++  G +L          +GG+
Sbjct: 138 SRTGMVNLALMDGILEVDKQRKTVRVQAGIRVQQLVDGLKDHGLTLQNFASIREQQIGGI 197

Query: 137 ISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLKAPDPLLNAAKLSLGVLG 196
           I  GAHG+    +   + + V+ + +V PA   +G  ++ K K P+ L   A+  LG LG
Sbjct: 198 IQVGAHGTG--ARLPPIDEQVIAMKLVTPA---KGTIEISKDKDPE-LFYLARCGLGGLG 251

Query: 197 AISK 200
            +++
Sbjct: 252 VVAE 255