Miyakogusa Predicted Gene

Lj3g3v0461620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461620.1 Non Chatacterized Hit- tr|A2ZTJ0|A2ZTJ0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,69.74,1e-16,S4,RNA-binding S4 domain;
AA_TRNA_LIGASE_I,Aminoacyl-tRNA synthetase, class I, conserved site;
Nucle,CUFF.40876.1
         (500 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g40060.1                                                       751   0.0  
Glyma14g38260.1                                                       255   7e-68
Glyma14g38250.1                                                       198   1e-50
Glyma19g32020.1                                                       106   5e-23
Glyma15g19990.1                                                        83   6e-16
Glyma20g08740.1                                                        81   3e-15
Glyma18g10970.1                                                        76   8e-14

>Glyma02g40060.1 
          Length = 482

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/495 (79%), Positives = 415/495 (83%), Gaps = 23/495 (4%)

Query: 7   SRTILSSHPTKLFILPFKPPSSHFPLRFT-RATCTLHSXXXXXXXXXXXNGRSVIGILEE 65
           +RT+L +H TK F  PFKP SS FPL+ T + TC   S           N  +VIGILEE
Sbjct: 8   TRTLLFTHSTKRFFRPFKPSSSPFPLQCTTKTTC---STLQQQQQPRRNNNYNVIGILEE 64

Query: 66  RGLLESITSDALRSASST-APLRVYCGFDPTAESLHLGNLLGIIVLSWFRRCGHNVVALI 124
           RGL+ESITSDALRSA  T APL+VYCGFDPTAESLHLGNLLG+IVLSWFR CGH  VALI
Sbjct: 65  RGLVESITSDALRSACLTPAPLKVYCGFDPTAESLHLGNLLGLIVLSWFRCCGHRAVALI 124

Query: 125 GGATARVGDPSGKSIERPELDVETLERNTLGIGNTIRTILGRAQNLNLEELSVXXXXXXX 184
           GGATA VGDPSGKS+ERPELD ETLERN L        ++G   N +    S        
Sbjct: 125 GGATALVGDPSGKSLERPELDAETLERNQLD-----SNLVGPNSNSDSNSDSN------- 172

Query: 185 GNLFDSSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLESEQGMSYTEFT 244
                SSVV+LNNYDWWKEFSLLDFLKRVGK+ARVGSMMAKESVRKRLESEQGMSYTEFT
Sbjct: 173 -----SSVVILNNYDWWKEFSLLDFLKRVGKFARVGSMMAKESVRKRLESEQGMSYTEFT 227

Query: 245 YQLLQGYDFLHLFQNEGVSVQIGGSDQWGNITAGTELVRKILQVESAVYGLTFPLLLKSD 304
           YQLLQGYDFLHLFQNEGVSVQIGGSDQWGNITAGTEL+RKILQVE A YGLTFPLLLKSD
Sbjct: 228 YQLLQGYDFLHLFQNEGVSVQIGGSDQWGNITAGTELIRKILQVEGA-YGLTFPLLLKSD 286

Query: 305 GTKFGKSEDGAIWLSPVLLSPYKFYQYFFSVPDADVVRFLKILTFLDIEEIVKLEEEMVK 364
           GTKFGKSEDGAIWLSP  LSPYKFYQYFFSVPD DV+RFLKILTFLDIEEIV LE EM K
Sbjct: 287 GTKFGKSEDGAIWLSPTFLSPYKFYQYFFSVPDDDVIRFLKILTFLDIEEIVALEGEMGK 346

Query: 365 PGYAPNTAQRRLAEEVTRFVHGEDGLREALRATEALRPGSETKLDWKTIEGIAEDVPSCS 424
           PGY PNTAQRRLAEEVTRFVHGEDGL EAL+ATEALRPGSETKLDWKTIEGIAEDVP CS
Sbjct: 347 PGYVPNTAQRRLAEEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVPCCS 406

Query: 425 LAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGGLYLNNSRVNSENKKIEVADIVDGKV 484
           LAYD VLN SLVDL VSSGLF+SKSAARRLLKQGGLYLNN+RV++E K+IE ADIVDGKV
Sbjct: 407 LAYDAVLNLSLVDLLVSSGLFESKSAARRLLKQGGLYLNNNRVDNEGKRIEAADIVDGKV 466

Query: 485 LLLSAGKKNKVLVRI 499
           LLLSAGKKNKVLVRI
Sbjct: 467 LLLSAGKKNKVLVRI 481


>Glyma14g38260.1 
          Length = 139

 Score =  255 bits (652), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 127/139 (91%), Positives = 133/139 (95%)

Query: 362 MVKPGYAPNTAQRRLAEEVTRFVHGEDGLREALRATEALRPGSETKLDWKTIEGIAEDVP 421
           M KPGY PNTAQRRLAEEVTRFVHGEDGL EAL+ATEALRPGSETKLDWKTIEGIAEDVP
Sbjct: 1   MGKPGYVPNTAQRRLAEEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVP 60

Query: 422 SCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGGLYLNNSRVNSENKKIEVADIVD 481
           SCSLAYD VLN SLVDLSVSSGLF+SKSAARRLLKQGGLYLNN+RV+SE+K+IE ADIVD
Sbjct: 61  SCSLAYDAVLNLSLVDLSVSSGLFESKSAARRLLKQGGLYLNNNRVDSESKRIEAADIVD 120

Query: 482 GKVLLLSAGKKNKVLVRIA 500
           GKVLLLSAGKKNKVLVRIA
Sbjct: 121 GKVLLLSAGKKNKVLVRIA 139


>Glyma14g38250.1 
          Length = 157

 Score =  198 bits (504), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/157 (66%), Positives = 119/157 (75%), Gaps = 4/157 (2%)

Query: 1   MTTTFA-SRTILSSHPTKLFILPFKPPSSHFPLRF-TRATCTLHSXXXXXXXXXXXNGRS 58
           M + +A +R++L +H TK F  PFKP SS FPL   T+ TC+              N  +
Sbjct: 1   MASIYAPTRSLLFTHTTKCFFRPFKPSSSPFPLHCATKTTCSTLQQQQQQPRRNNSNN-N 59

Query: 59  VIGILEERGLLESITSDALRSASSTAP-LRVYCGFDPTAESLHLGNLLGIIVLSWFRRCG 117
           VIGILEERGL+ESITSDALRSA  T P L+VYCGFDPTAESLHLGNLLG+IVLSWFRRCG
Sbjct: 60  VIGILEERGLVESITSDALRSACLTPPPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCG 119

Query: 118 HNVVALIGGATARVGDPSGKSIERPELDVETLERNTL 154
           H  VALIGGATARVGDPSGKS+ERPELD ETLERN +
Sbjct: 120 HRAVALIGGATARVGDPSGKSLERPELDAETLERNQM 156


>Glyma19g32020.1 
          Length = 102

 Score =  106 bits (265), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 66/132 (50%), Positives = 73/132 (55%), Gaps = 31/132 (23%)

Query: 71  SITSDALRSASSTAPLRVYCGFDPTAESLHLGNLLGIIVLSWFRRCGHNVVALIGGATAR 130
           SITSDALRS   T P   +C                        RCGH  + LI G TA 
Sbjct: 1   SITSDALRSVCLTPPPLKFC------------------------RCGHRALVLIYGTTAC 36

Query: 131 VGDPSGKSIERPELDVETLERNTLGIGNTIRTILGRAQNLNLEELSVXXXXXXXGNLFDS 190
           VGDPSGKS +RPELD+ETLERN LGI NTI  ILG AQN NL             +  +S
Sbjct: 37  VGDPSGKSCKRPELDIETLERNQLGISNTIHQILGYAQNSNL-------VGPISNSGSNS 89

Query: 191 SVVVLNNYDWWK 202
           SVV+LNNYDWWK
Sbjct: 90  SVVILNNYDWWK 101


>Glyma15g19990.1 
          Length = 43

 Score = 83.2 bits (204), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/43 (83%), Positives = 37/43 (86%)

Query: 88  VYCGFDPTAESLHLGNLLGIIVLSWFRRCGHNVVALIGGATAR 130
           VYCGFDPT ESLHLGNLL +IVLSWFRRCGH  VALI GAT R
Sbjct: 1   VYCGFDPTEESLHLGNLLDLIVLSWFRRCGHRAVALICGATVR 43


>Glyma20g08740.1 
          Length = 69

 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 4/64 (6%)

Query: 82  STAPLRVYCGFDPTAESLHLGNLLGIIVLSWFRRCGHNVVALIGGATARVGDPSGKSIER 141
           +  PL VY  F+PT ESLHL NLLG+I+LSWF    H  +ALI GAT  VGDP GKS+ER
Sbjct: 10  TLPPLIVYYSFNPTVESLHLRNLLGLIILSWF----HRAIALIRGATVCVGDPFGKSLER 65

Query: 142 PELD 145
           P+LD
Sbjct: 66  PKLD 69


>Glyma18g10970.1 
          Length = 67

 Score = 76.3 bits (186), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/56 (62%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 63  LEERGLLESITSDALRSAS-STAPLRVYCGFDPTAESLHLGNLLGIIVLSWFRRCG 117
           +EE GL+ESI  D L S      PL+ YCGFDPT ESLHLGNLLG+ VLSWF  C 
Sbjct: 6   IEEHGLVESIIGDTLHSEFLKPPPLKAYCGFDPTTESLHLGNLLGLFVLSWFCHCA 61