Miyakogusa Predicted Gene

Lj3g3v0460930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0460930.1 Non Chatacterized Hit- tr|E0W1S0|E0W1S0_PEDHC
Transcription initiation factor TFIID subunit,
putativ,52.17,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,TAFII28-like protein; no description,Histone-fold;
Histon,NODE_22423_length_461_cov_104.694145.path2.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g00420.2                                                       211   2e-55
Glyma03g00420.1                                                       211   2e-55

>Glyma03g00420.2 
          Length = 155

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/109 (94%), Positives = 107/109 (98%)

Query: 1   MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKITIPITIVVSGIAKMF 60
           MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKI++P+TIVVSGIAKMF
Sbjct: 47  MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISVPMTIVVSGIAKMF 106

Query: 61  VGEVVETARIVIKERKESGPIRPCHLREAYRRLKLEGKVFKRSVPRLFR 109
           VGEVVETARIV+KERKESGPIRPCHLREAYRRLKLEGKVFKRS  RLFR
Sbjct: 107 VGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSSRLFR 155


>Glyma03g00420.1 
          Length = 156

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/109 (94%), Positives = 107/109 (98%)

Query: 1   MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKITIPITIVVSGIAKMF 60
           MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKI++P+TIVVSGIAKMF
Sbjct: 48  MAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISVPMTIVVSGIAKMF 107

Query: 61  VGEVVETARIVIKERKESGPIRPCHLREAYRRLKLEGKVFKRSVPRLFR 109
           VGEVVETARIV+KERKESGPIRPCHLREAYRRLKLEGKVFKRS  RLFR
Sbjct: 108 VGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSSRLFR 156