Miyakogusa Predicted Gene

Lj3g3v0449850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0449850.1 tr|G7L1D4|G7L1D4_MEDTR Neurobeachin-like protein
OS=Medicago truncatula GN=MTR_7g075660 PE=4 SV=1,80.36,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL,CUFF.40791.1
         (912 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g25050.1                                                       101   4e-21

>Glyma19g25050.1 
          Length = 143

 Score =  101 bits (251), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 49/67 (73%)

Query: 218 LDVLSSMADGSGQIPTSAVERIXXXXXXEPYESVSCAFVSYGSCVKDLADGWKYRSRLWY 277
             VLSSMAD +GQI TS  ER+       PYESVSCAFVSYG C KDLA GWKYRSRLWY
Sbjct: 62  FQVLSSMADENGQISTSVFERLVAVAVAGPYESVSCAFVSYGFCAKDLAIGWKYRSRLWY 121

Query: 278 GVGLPQN 284
            VGLP N
Sbjct: 122 DVGLPSN 128



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 27/28 (96%)

Query: 84  RREESLPVFKRRLLGGLLDFAARELQVQ 111
           RREESLP+FKRRL GGLL+FAARELQVQ
Sbjct: 1   RREESLPIFKRRLFGGLLEFAARELQVQ 28