Miyakogusa Predicted Gene
- Lj3g3v0429680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0429680.1 Non Chatacterized Hit- tr|K3XQS7|K3XQS7_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,46.35,2e-18,VQ,VQ; seg,NULL,CUFF.40772.1
(232 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g35380.1 216 1e-56
Glyma06g36640.1 208 5e-54
Glyma13g35130.1 197 7e-51
Glyma12g24250.1 179 2e-45
Glyma09g24010.1 137 8e-33
Glyma07g31780.1 132 4e-31
Glyma15g08160.1 124 8e-29
Glyma13g31180.1 121 5e-28
Glyma13g24700.1 112 4e-25
Glyma10g15620.1 65 9e-11
Glyma09g15170.1 57 2e-08
Glyma07g03240.1 49 4e-06
>Glyma12g35380.1
Length = 246
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 137/195 (70%), Gaps = 17/195 (8%)
Query: 45 RSDSNPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVPSSRNFNIPPMKT 104
RSDSNPYPTT+VQADTS+FKQVVQMLTGSSDTTK A QDP PSSRNFNIPP+KT
Sbjct: 62 RSDSNPYPTTFVQADTSTFKQVVQMLTGSSDTTKQA------SQDPPPSSRNFNIPPIKT 115
Query: 105 APKKQQQQGFKLYERRNYNNSLKNTLIINTFMKPNSAEICRFXXXXX------XXXXXXX 158
PKKQQ GFKLYERRN NSLKN+L++NT M +
Sbjct: 116 PPKKQQ--GFKLYERRN--NSLKNSLMLNTLMPNFAHNHNNNNSPSFSPRNMPEILSPSL 171
Query: 159 XDFPSLALSPVTPLNDDPFDKXXXXXXXXXXXXKAIADKGFYLHPSPMSTPRGFEPQLLP 218
DFPSLALSPVTPLNDDPFDK KAIA+KGFYLHPSPM+TPR EPQLLP
Sbjct: 172 LDFPSLALSPVTPLNDDPFDKSSPSLGNSSEEDKAIAEKGFYLHPSPMTTPRDSEPQLLP 231
Query: 219 LFPVTSPRV-TESPS 232
LFPVTSPRV +ESPS
Sbjct: 232 LFPVTSPRVSSESPS 246
>Glyma06g36640.1
Length = 244
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/202 (63%), Positives = 138/202 (68%), Gaps = 23/202 (11%)
Query: 45 RSDS--NPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPV----PSSRNFN 98
RSDS NPYPTT+VQADTS+FK VVQMLTGSS+TT P + LQDPV SS+NFN
Sbjct: 48 RSDSTTNPYPTTFVQADTSTFKHVVQMLTGSSETTNP----QQQLQDPVQPQSSSSKNFN 103
Query: 99 IPPMKTAPKKQQQQGFKLYERRNYNNSLKNTLIINTFMKPNSAEICRFXXXXX------X 152
IPPMKT PKK QQGFKLYERRN NN LKNTL+INT + PN A F
Sbjct: 104 IPPMKTTPKK--QQGFKLYERRNNNNHLKNTLMINTLV-PNFAHSSGFSSSSSSPCNKPE 160
Query: 153 XXXXXXXDFPSLAL-SPVTPLNDDPFDKXX---XXXXXXXXXXKAIADKGFYLHPSPMST 208
DFPSL L SPVTPLNDDPFDK +AIA+KGFYLHPSPMST
Sbjct: 161 ILSPSLLDFPSLTLSSPVTPLNDDPFDKSSSLPSLGSTSSEEERAIAEKGFYLHPSPMST 220
Query: 209 PRGFEPQLLPLFPVTSPRVTES 230
PR FEPQLLPLFPVTSPRV+ES
Sbjct: 221 PRDFEPQLLPLFPVTSPRVSES 242
>Glyma13g35130.1
Length = 249
Score = 197 bits (501), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 136/196 (69%), Gaps = 12/196 (6%)
Query: 45 RSDSNPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVPSS-RNFNIPPMK 103
RSDSNPYPTT+VQADTS+FKQVVQMLTGSSDTTK A Q P SS RNFNIPP+K
Sbjct: 58 RSDSNPYPTTFVQADTSTFKQVVQMLTGSSDTTKQASQDPQPPQPPSSSSSRNFNIPPIK 117
Query: 104 TAPKKQQQQGFKLYERRNYNNSLKNTLIINTFM------KPNSAEICRFXXXXXXXXXXX 157
AP K+QQ GFKLYERRN SLKN+L++NT M N++
Sbjct: 118 -APPKKQQGGFKLYERRN---SLKNSLMLNTLMPNFAYNHNNNSPSFSPRNNMPEILSPS 173
Query: 158 XXDFPSLALSPVTPLNDDPFDKXXXXXXXXXXXXKAIADKGFYLHPSPMSTPRGFEPQLL 217
DFPSLALSPVTPLNDDPFDK KAIA+KGFYLHPSPM+TPR EPQLL
Sbjct: 174 LLDFPSLALSPVTPLNDDPFDKSSPSLGNSSEEDKAIAEKGFYLHPSPMTTPRDSEPQLL 233
Query: 218 PLFPVTSPRV-TESPS 232
PLFPVTSPRV ++SPS
Sbjct: 234 PLFPVTSPRVSSQSPS 249
>Glyma12g24250.1
Length = 248
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 137/203 (67%), Gaps = 18/203 (8%)
Query: 45 RSDS-NPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVP------SSRNF 97
RSDS NPYPTT+VQADTS+FKQVVQMLTGSS+TTKP + Q SS+NF
Sbjct: 49 RSDSTNPYPTTFVQADTSTFKQVVQMLTGSSETTKPQLQQQQQQQQQDLVQPQSSSSKNF 108
Query: 98 NIPPMKTAPKKQQQQGFKLYERRNYNNS--LKNTLIINTFMKPNSAEICRFXXXXX---X 152
NIPPMK PKKQQ GFKLYERRN NN+ LKNTL+INT + PN A F
Sbjct: 109 NIPPMKATPKKQQ--GFKLYERRNNNNNHHLKNTLMINTLV-PNFAHSSGFSSSHHNKPE 165
Query: 153 XXXXXXXDFPSLALS-PVTPLNDDPFDKXXXXXXXXX--XXXKAIADKGFYLHPSPMSTP 209
DFPSL LS PVTPLNDDPFDK +AIA+KGFYLHPSPMSTP
Sbjct: 166 ILSPSLLDFPSLTLSSPVTPLNDDPFDKSSSPSLGSTSSEEERAIAEKGFYLHPSPMSTP 225
Query: 210 RGFEPQLLPLFPVTSPRVTESPS 232
R EPQLLPLFPVTSPRV+ESPS
Sbjct: 226 RDSEPQLLPLFPVTSPRVSESPS 248
>Glyma09g24010.1
Length = 192
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 106/195 (54%), Gaps = 32/195 (16%)
Query: 45 RSDSNPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVPSSRNFNIPPMKT 104
R DSNPYPTT+VQADTS+FKQ ++ +T+ P+
Sbjct: 23 RFDSNPYPTTFVQADTSTFKQHHKIHHHHPETS---------------------TYPITN 61
Query: 105 APKKQQQQGFKLYERRNYNNSLKNTLIINTFMKPNSAEICRFXXXXXXXXXX------XX 158
+PKKQQ GFKLYERRN SLKN L++NT M S
Sbjct: 62 SPKKQQ--GFKLYERRN--KSLKNNLMLNTLMPNFSHNHNNNNSPSFSPRNMPKILSPSL 117
Query: 159 XDFPSLALSPVTPLNDDPFDKXXXXXXXXXXXXKAIADKGFYLHPSPMSTPRGFEPQLLP 218
DF SLALSPVTP NDDPFDK KAI KGFYLHPSPM+TPR EPQLL
Sbjct: 118 LDFLSLALSPVTPFNDDPFDKSSPSLGNSSKEDKAIVVKGFYLHPSPMTTPRDSEPQLLS 177
Query: 219 LFPVTSPRVT-ESPS 232
LFPVTS RV+ ESPS
Sbjct: 178 LFPVTSARVSLESPS 192
>Glyma07g31780.1
Length = 262
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 108/191 (56%), Gaps = 28/191 (14%)
Query: 45 RSDS-NPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVPSSRNFNIPPMK 103
RS+S NPYPTT+VQADT+SFKQVVQMLTGS+ T K A S P+ + +IPP+K
Sbjct: 75 RSESANPYPTTFVQADTTSFKQVVQMLTGSTQTAKQASASASE-----PAKPHTHIPPIK 129
Query: 104 TAPKKQQQQGFKLYERRNYNNSLKNTLIINTFMKPNSAEICRFX-XXXXXXXXXXXXDFP 162
+Q GFKL+ERR NSL L IN N+ + F DFP
Sbjct: 130 ------KQTGFKLFERR---NSLSKNLSINPL---NNVVVSSFSPRKHHEVLSPSILDFP 177
Query: 163 SLALSPVTPLNDDPFDKXXXXX---------XXXXXXXKAIADKGFYLHPSPMSTPRGFE 213
+L LSPVTPL DPF++ KAI +KGF+LHPSP STPR +
Sbjct: 178 ALVLSPVTPLIPDPFNRSRSLNENGAGMVMDTAEATEEKAIKEKGFFLHPSPASTPRDEK 237
Query: 214 PQLLPLFPVTS 224
P+LLPLFP T+
Sbjct: 238 PRLLPLFPTTT 248
>Glyma15g08160.1
Length = 199
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 104/182 (57%), Gaps = 19/182 (10%)
Query: 48 SNPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVPSSRNFN-IPPMKTAP 106
+NPYPTT+VQADTSSFKQVVQMLTGSS+T K A SS+ N IPPMK+ P
Sbjct: 26 ANPYPTTFVQADTSSFKQVVQMLTGSSETAKQAAAGG--------SSKPSNSIPPMKSIP 77
Query: 107 KKQQQQGFKLYERRNYNNSLKNTLIINTFMKPNSAEICRFXXXXXXXXXXXXXDFPSLAL 166
K+ KLYERR + +LKN + +F ++ R DFP+L L
Sbjct: 78 NKKHFS--KLYERRANSLNLKNINPLTSFFSNHNTNSPR----KPDILSPSILDFPALVL 131
Query: 167 SPVTPLNDDPFDKXXXXXXXXXXXXKAIADKGFYLHPSPMSTPRGFEPQLLPLFPVTSPR 226
SPVTPL DPFD+ KAI +KGF+ HPSP +P+LLPLFP TSPR
Sbjct: 132 SPVTPLIPDPFDR-SNAAIDSEAEDKAIKEKGFFFHPSPRD---KSQPRLLPLFPTTSPR 187
Query: 227 VT 228
+
Sbjct: 188 AS 189
>Glyma13g31180.1
Length = 215
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 105/186 (56%), Gaps = 24/186 (12%)
Query: 48 SNPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVPSSRNFN-IPPMKTAP 106
+N YPTT+VQADT+SFKQVVQMLTGSS+T K A + SS+ N IPPMK+ P
Sbjct: 29 ANSYPTTFVQADTTSFKQVVQMLTGSSETAKQAAAAAAAASSSSSSSKPANPIPPMKSIP 88
Query: 107 KKQQQQGF-KLYERRNYNNSLKNTLIINTFM--------KPNSAEICRFXXXXXXXXXXX 157
K+QQ F KLYERR + +L+N+L IN P A+I
Sbjct: 89 NKKQQPHFSKLYERRTNSLNLRNSLHINPLTSFFSNHTNSPRKADIL----------SPS 138
Query: 158 XXDFPSLALSPVTPLNDDPFDKXXXXXXXXXXXXKAIADKGFYLHPSPMSTPRGFEPQLL 217
DFP+L LSPVTPL DPFD+ KAI +KGF+LHPSP +P LL
Sbjct: 139 ILDFPALVLSPVTPLIPDPFDR-SNAAIDSEAEVKAIKEKGFFLHPSPRD---KAQPLLL 194
Query: 218 PLFPVT 223
PLFP T
Sbjct: 195 PLFPTT 200
>Glyma13g24700.1
Length = 281
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 110/199 (55%), Gaps = 30/199 (15%)
Query: 45 RSDS-NPYPTTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPVPSSRNFNIPPMK 103
RS+S NPYPTT+VQADT+SFKQVVQMLTGS+ T K A S + PS + +IPP++
Sbjct: 77 RSESGNPYPTTFVQADTNSFKQVVQMLTGSTQTAKQASASASPKPNSEPSKPHSHIPPIR 136
Query: 104 TAPKKQQQQGFKLYERRNYNNSLKNTLI---INT--FMKPNSAEI-------CRFXXXXX 151
+Q GFKL ERRN NSLKN I I T F++ + I
Sbjct: 137 ------KQTGFKLLERRN--NSLKNLNINPLIGTSGFIRGSDNNIKNVVVSSFSPSSRKP 188
Query: 152 XXXXXXXXDFPSLALSPVTPLNDDPFDKXXXXXXXXXXXX---------KAIADKGFYLH 202
DFP+L LSPVTPL DPF++ KAI +KGF+LH
Sbjct: 189 EVLSPSILDFPALVLSPVTPLIPDPFNRSRFLNENGTVLMDAIEAAAEEKAIKEKGFFLH 248
Query: 203 PSPMSTPRGFEPQLLPLFP 221
PSP STPR +P+LLPLFP
Sbjct: 249 PSPASTPRDEKPRLLPLFP 267
>Glyma10g15620.1
Length = 119
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 109 QQQQGFKLYERRNYNNSLKNTLIINTFMKPNSAEICRFXXXXXXXXXX------XXXDFP 162
+QQQGFKLY+RRN N+LKN+L++NT M + DFP
Sbjct: 3 KQQQGFKLYDRRN--NTLKNSLMLNTLMPNFAHNHNNNNSPSFSSSNIPEILSPGLLDFP 60
Query: 163 SLALSPVTPLNDDPFDKXXXXXXXXXXXXKAIADKGFYLHPSP 205
SLALSPVT NDDPFDK K IA++ P P
Sbjct: 61 SLALSPVTQFNDDPFDKSSPSLGNSSEEDKPIAERASTCIPLP 103
>Glyma09g15170.1
Length = 118
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 120 RNYNNSLKNTLIINTFMKPNSAEICRFXXXXXXXXXXXXXDFPSLALSPVTPLNDDPFDK 179
+N N +L N +II +F+ ++ DFP+L LSP+TPL +PF++
Sbjct: 8 KNPNINLLNNVIILSFLPRKHHKVL----------SPSILDFPTLVLSPITPLIPNPFNR 57
Query: 180 X---------XXXXXXXXXXXKAIADKGFYLHPSPMSTPRGFEPQLLPLFPVTS 224
K++ +KGF+L PSP+STP +P+LLP FP T+
Sbjct: 58 SHFVNENGAIVVMETVEAAEKKSMKEKGFFLDPSPVSTPHDEKPRLLPFFPTTA 111
>Glyma07g03240.1
Length = 193
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 53 TTYVQADTSSFKQVVQMLTGSSDTTKPAPCSKLHLQDPV---------PSSRNFNIPPMK 103
TT+VQA+ S+F+ VVQ LTG+SD KL L P P+S I P K
Sbjct: 16 TTFVQANPSNFRAVVQKLTGASDDPS---AHKLPLTLPTRLAAAQSHRPASAGEVIGPKK 72
Query: 104 TAPKKQQQQGFKLYERRNYNNSLKNTLIINTFMKPNSAEICRFXXXXXXXXXXXXXDFPS 163
FKL+ERRN + + L I+T M + +
Sbjct: 73 --------PNFKLHERRNAA-AKRLELPIDTAMSMMMMSVSPTSSLVRSRTTTT-----T 118
Query: 164 LALSPVTPLNDDPFDKXXXXXXXXXXXXKAIADKGFYLHPSPMST 208
L SPV+PL + + +AIA+KGFYLHPSP ++
Sbjct: 119 LVASPVSPL-ELFLARASPRTPHEEEEERAIAEKGFYLHPSPRAS 162