Miyakogusa Predicted Gene

Lj3g3v0429420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0429420.1 Non Chatacterized Hit- tr|B9T4B3|B9T4B3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,40.84,4e-17,seg,NULL,CUFF.40758.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g27390.1                                                        71   1e-12
Glyma06g36170.1                                                        70   2e-12

>Glyma12g27390.1 
          Length = 192

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 130 FHNKVLNNRSTVSGHHFHQPYGCSRRWQYITPVPA-LNRDASKRKTMDMPRGMRRXXXXX 188
           FHNK+    S  +    H    CS+RWQYITPVPA L+RD S R+  D  +G ++     
Sbjct: 84  FHNKLKGGGSLRAKTQSHHQAYCSQRWQYITPVPAALSRDGSVRRRGDTNQGKKKKDKGT 143

Query: 189 XXXXXXXXXXRVSA---FRFGRRIFRWLFTACRKCHAMEPSKTKAHNKE 234
                       +      FGRRI RW   ACR+CHAMEPS +K  +KE
Sbjct: 144 KRNNNNNDNNNKNKGVRLGFGRRILRWFVMACRECHAMEPS-SKGRSKE 191



 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 29/39 (74%), Gaps = 3/39 (7%)

Query: 32 TPNQEDSDFEFGSLTPDSPSC---TTSPADHLFFNGRLQ 67
          TP  + +DFEFGSLTPDSPS      SPADHLF NGRLQ
Sbjct: 1  TPTLDSADFEFGSLTPDSPSTEPFAASPADHLFLNGRLQ 39


>Glyma06g36170.1 
          Length = 200

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 17/121 (14%)

Query: 130 FHNKVLNN-----RSTVSGHHFHQPYGCSRRWQYITPVPA-LNRDASKRKTMDMPRGMRR 183
           FHNK   +     R+    H+  Q Y CS+RWQYITPVPA L+RD S RK  D  +G ++
Sbjct: 84  FHNKHKGDGGGSLRAKTQSHN--QAY-CSQRWQYITPVPAALSRDGSVRKRRDTNQGKKK 140

Query: 184 XXXXXXXXXXXXXXXRVSA-------FRFGRRIFRWLFTACRKCHAMEPSKTKAHNKEKM 236
                            +         RFG+RI RW   ACR+CHAMEPS +K  NKE +
Sbjct: 141 KKKDKGSKSNNNKNKDNNNKNNKGVRLRFGKRILRWFLMACRECHAMEPS-SKGRNKEIV 199

Query: 237 L 237
           +
Sbjct: 200 I 200



 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 29/39 (74%), Gaps = 3/39 (7%)

Query: 32 TPNQEDSDFEFGSLTPDSPSC---TTSPADHLFFNGRLQ 67
          TP  + +DFEFGSLTPDS S      SPADHLFFNGRLQ
Sbjct: 1  TPTPDSADFEFGSLTPDSSSAEPFAGSPADHLFFNGRLQ 39