Miyakogusa Predicted Gene

Lj3g3v0428960.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428960.2 Non Chatacterized Hit- tr|I1KDP8|I1KDP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41899
PE,75.78,0,seg,NULL; no description,NULL; RNase_T,Exonuclease, RNase
T/DNA polymerase III; Ribonuclease H-like,,CUFF.40732.2
         (323 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g35090.1                                                       461   e-130
Glyma13g26150.3                                                        93   4e-19
Glyma13g26150.2                                                        93   4e-19
Glyma13g26150.1                                                        93   4e-19
Glyma15g36910.1                                                        90   3e-18

>Glyma06g35090.1 
          Length = 316

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/322 (71%), Positives = 258/322 (80%), Gaps = 7/322 (2%)

Query: 1   MALLRASSLSKLFSHRNXXXXXXXXXXXXXHHCTPSPSLPPMHSLTVSAXXXXXXXXXXX 60
           MAL RA  L+++ SHRN             ++ + S +    HSLT+SA           
Sbjct: 1   MALPRAC-LARILSHRNPMFLSLSPLTMHANYLSHSQT----HSLTLSASLSTSEAPSSH 55

Query: 61  XXXXXXXWKPMCLYHTQGKCTMMDDLIHLEKFNHDCSRELQVNSAELNKICPQNLDFFLV 120
                   KPMCLYH+QGKCT MDD IHLE FNHDC REL VN+AELNKI  Q+LDFFLV
Sbjct: 56  EPHFRR--KPMCLYHSQGKCTKMDDPIHLETFNHDCFRELLVNTAELNKIRSQDLDFFLV 113

Query: 121 LDLEGKVEILEFPVLKICAKTLQVEDIFHRFVRPTVMSEQRINEYIEGKYGKFGVDRVWH 180
           LDLEG+VEILEFPVL I AKTLQVEDIFHRFVRP+ MSE+RINEY+EGKYGKFGV RVWH
Sbjct: 114 LDLEGRVEILEFPVLMISAKTLQVEDIFHRFVRPSKMSERRINEYVEGKYGKFGVHRVWH 173

Query: 181 DTAIPFKEVIQEFEAWLMQHQLWMGGKLNRAAFVTCGNWDLKTKVPQQCEVSKIKLPPYF 240
           DTAIPF +VIQ+F  WLM+HQLWMG KL RAAFVTCGNWDLKTKVPQQCEVSKI+LPPYF
Sbjct: 174 DTAIPFTDVIQQFGTWLMRHQLWMGEKLIRAAFVTCGNWDLKTKVPQQCEVSKIELPPYF 233

Query: 241 VEWINLKDVYLNFYNRRATGMVTMVKELQIPLMGSHHLGIDDTKNIARVLQRMLIDGALI 300
           +EWINLKDVYLNFY+RRATGMVTM+KELQIP++GSHHLGIDDT+NIARVLQ ML+DGAL+
Sbjct: 234 MEWINLKDVYLNFYDRRATGMVTMMKELQIPMVGSHHLGIDDTRNIARVLQHMLLDGALV 293

Query: 301 QITARRNPSSPGNVNFLFKNRI 322
           QITARRNP S  +V FLFKNRI
Sbjct: 294 QITARRNPRSLRDVKFLFKNRI 315


>Glyma13g26150.3 
          Length = 414

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 18/200 (9%)

Query: 113 QNLDFFLVLDLEGKV---------EILEFPVLKICAKTLQVEDIFHRFVRPTVMSEQRIN 163
           Q   +F+V+D E            EI+EFP + + + T Q+E  F  +VRPT    Q ++
Sbjct: 135 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTC--NQLLS 192

Query: 164 EYIEGKYGKFGVDRVWHDTAIPFKEVIQEFEAWLMQHQLWMGGKLNRAAFVTCGNWDLKT 223
           ++ +   G   + ++  D  +   E +   + WL +     G K +  A VT  NWD + 
Sbjct: 193 DFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEKK----GIKNSNFAVVTWSNWDCRV 245

Query: 224 KVPQQCEVSKIKLPPYFVEWINLKDVYLNFYNRRATGMVTMVKELQIPLMGSHHLGIDDT 283
            +  +C   KI+ PPYF  WINL+  +   +      +   V+   +   G  H G+DD 
Sbjct: 246 MLESECRFKKIRKPPYFNRWINLRIPFREVFGAVKCNLKEAVEIAGLAWQGRAHCGLDDA 305

Query: 284 KNIARVLQRMLIDGALIQIT 303
           KN AR+L  ++  G    IT
Sbjct: 306 KNTARLLALLMHRGFKFSIT 325


>Glyma13g26150.2 
          Length = 414

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 18/200 (9%)

Query: 113 QNLDFFLVLDLEGKV---------EILEFPVLKICAKTLQVEDIFHRFVRPTVMSEQRIN 163
           Q   +F+V+D E            EI+EFP + + + T Q+E  F  +VRPT    Q ++
Sbjct: 135 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTC--NQLLS 192

Query: 164 EYIEGKYGKFGVDRVWHDTAIPFKEVIQEFEAWLMQHQLWMGGKLNRAAFVTCGNWDLKT 223
           ++ +   G   + ++  D  +   E +   + WL +     G K +  A VT  NWD + 
Sbjct: 193 DFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEKK----GIKNSNFAVVTWSNWDCRV 245

Query: 224 KVPQQCEVSKIKLPPYFVEWINLKDVYLNFYNRRATGMVTMVKELQIPLMGSHHLGIDDT 283
            +  +C   KI+ PPYF  WINL+  +   +      +   V+   +   G  H G+DD 
Sbjct: 246 MLESECRFKKIRKPPYFNRWINLRIPFREVFGAVKCNLKEAVEIAGLAWQGRAHCGLDDA 305

Query: 284 KNIARVLQRMLIDGALIQIT 303
           KN AR+L  ++  G    IT
Sbjct: 306 KNTARLLALLMHRGFKFSIT 325


>Glyma13g26150.1 
          Length = 414

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 18/200 (9%)

Query: 113 QNLDFFLVLDLEGKV---------EILEFPVLKICAKTLQVEDIFHRFVRPTVMSEQRIN 163
           Q   +F+V+D E            EI+EFP + + + T Q+E  F  +VRPT    Q ++
Sbjct: 135 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTC--NQLLS 192

Query: 164 EYIEGKYGKFGVDRVWHDTAIPFKEVIQEFEAWLMQHQLWMGGKLNRAAFVTCGNWDLKT 223
           ++ +   G   + ++  D  +   E +   + WL +     G K +  A VT  NWD + 
Sbjct: 193 DFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEKK----GIKNSNFAVVTWSNWDCRV 245

Query: 224 KVPQQCEVSKIKLPPYFVEWINLKDVYLNFYNRRATGMVTMVKELQIPLMGSHHLGIDDT 283
            +  +C   KI+ PPYF  WINL+  +   +      +   V+   +   G  H G+DD 
Sbjct: 246 MLESECRFKKIRKPPYFNRWINLRIPFREVFGAVKCNLKEAVEIAGLAWQGRAHCGLDDA 305

Query: 284 KNIARVLQRMLIDGALIQIT 303
           KN AR+L  ++  G    IT
Sbjct: 306 KNTARLLALLMHRGFKFSIT 325


>Glyma15g36910.1 
          Length = 414

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 18/200 (9%)

Query: 113 QNLDFFLVLDLEGKV---------EILEFPVLKICAKTLQVEDIFHRFVRPTVMSEQRIN 163
           Q   +F+V+D E            EI+EFP + + + T Q+E  F  +VRPT    Q + 
Sbjct: 135 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTC--NQLLT 192

Query: 164 EYIEGKYGKFGVDRVWHDTAIPFKEVIQEFEAWLMQHQLWMGGKLNRAAFVTCGNWDLKT 223
           ++ +   G   + ++  D  +   E +   + WL +     G K +  A VT  NWD + 
Sbjct: 193 DFCKDLTG---IQQIQVDRGVTLSEALLRHDKWLEKK----GIKNSNFAVVTWSNWDCRV 245

Query: 224 KVPQQCEVSKIKLPPYFVEWINLKDVYLNFYNRRATGMVTMVKELQIPLMGSHHLGIDDT 283
            +  +C   KI+ PPYF  WINL+  +   +      +   V+   +   G  H G+DD 
Sbjct: 246 MLESECRFKKIRKPPYFNRWINLRIPFREVFGAVRCNLKEAVEIAGLAWQGRAHCGLDDA 305

Query: 284 KNIARVLQRMLIDGALIQIT 303
           KN A +L  ++  G    IT
Sbjct: 306 KNTAHLLALLMHRGFKFSIT 325