Miyakogusa Predicted Gene
- Lj3g3v0428880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0428880.1 Non Chatacterized Hit- tr|A5BT31|A5BT31_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,64.62,2e-17,HOMEOBOX_2,Homeodomain; Homeodomain,Homeodomain; no
description,Homeodomain-like; coiled-coil,NULL; ,CUFF.40745.1
(374 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g18490.1 535 e-152
Glyma06g35560.1 492 e-139
Glyma06g09200.1 164 1e-40
Glyma04g09100.1 164 2e-40
Glyma04g09100.2 157 2e-38
Glyma07g01880.2 155 8e-38
Glyma07g01880.1 155 8e-38
Glyma08g21560.3 153 4e-37
Glyma08g21560.2 153 4e-37
Glyma08g21560.1 153 4e-37
>Glyma12g18490.1
Length = 369
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 275/392 (70%), Positives = 302/392 (77%), Gaps = 43/392 (10%)
Query: 1 MGRPPSNGGPAFRFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQM 60
MGRPPSNGGPAFRFTQ EVAEMEAILQEHNNAMP+RDVL LAEKFSES DRKGKI VQM
Sbjct: 1 MGRPPSNGGPAFRFTQPEVAEMEAILQEHNNAMPSRDVLTTLAEKFSESQDRKGKIAVQM 60
Query: 61 KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTA 120
KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPR VPT
Sbjct: 61 KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPR----------------------GVPTAV 98
Query: 121 KVTPENSVMEFEAKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRN 180
K TPENSV+EFEAKS RDGAWYDVA+FLSHRYLE+SDPEVLVRFAGFGPEEDEW+N+R++
Sbjct: 99 KATPENSVLEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINIRKH 158
Query: 181 VRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRY 240
VRPRSLPCESSECV V+PGDLILCFQEGKEQALYFDAHVLD+Q FLVRY
Sbjct: 159 VRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRY 218
Query: 241 DHDQSEEIVPLRKVCRRPETDYRLQQLHAVSDSAHVDQQKSGMD-AANVYTIRVT----- 294
DHDQSEEIVPLRK+CRRPETDYRLQQLHAV+++A +DQQK+GMD AANV +R T
Sbjct: 219 DHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPMDQQKTGMDPAANVNAVRATTTETA 278
Query: 295 --------SSSETVPKQQV-TNIHQLPTPVLQPNVSLAPQSMN--VDPKKAET-TDVQPG 342
+++ETVPKQ + NIH PV+Q NV PQSM+ VD KKAET TDVQ G
Sbjct: 279 ANVNAVRATTTETVPKQLIAANIHMETVPVVQTNVPQPPQSMDMGVDQKKAETNTDVQAG 338
Query: 343 NSTIVPGSVPFPSIVTTTSAPEVP--TQNMAE 372
NS I PGSV +I+TT+ P+V TQNM E
Sbjct: 339 NSIITPGSV-LTNIITTSGVPKVSSQTQNMVE 369
>Glyma06g35560.1
Length = 295
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/292 (80%), Positives = 255/292 (87%), Gaps = 4/292 (1%)
Query: 1 MGRPPSNGGPAFRFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQM 60
MGRPPSNGGPAFRFTQ EV+EMEAILQEHNNAMP+RDVL LAEKFSES DRKGKI+VQM
Sbjct: 1 MGRPPSNGGPAFRFTQPEVSEMEAILQEHNNAMPSRDVLTALAEKFSESQDRKGKISVQM 60
Query: 61 KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDD--SAPVRNM-SQPIAAPILTGPGSVP 117
KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDD S P+R+M QP AA I +VP
Sbjct: 61 KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTAASIPAASATVP 120
Query: 118 TTAKVTPENSVMEFEAKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNV 177
T K T ENSVMEFEAKS RDGAWYDVA+FLSHRYLE+SDPEVLVRFAGFGPEEDEW+N+
Sbjct: 121 TAVKATTENSVMEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINI 180
Query: 178 RRNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFL 237
R++VRPRSLPCESSECV V+PGDLILCFQEGKEQALYFDAHVLD+Q FL
Sbjct: 181 RKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFL 240
Query: 238 VRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAVSDSAHVDQQKSGMD-AANV 288
VRYDHDQSEEIVPLRK+CRRPETDYRLQQLHAV+++A VDQQK+GMD AAN
Sbjct: 241 VRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPVDQQKTGMDPAANC 292
>Glyma06g09200.1
Length = 231
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 30/243 (12%)
Query: 5 PSNGGPAFRFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQMKQVW 64
P N FT E+ +ME +L+E R+ LA F+ S R GK ++ ++
Sbjct: 6 PRNRAVFSGFTNAEIEKMEKLLREPTGGSLGREFYQKLARSFNYSSGRAGKPIIKWTEIE 65
Query: 65 NWFQNKRYAIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTAKVTP 124
+WFQ + S + P + P ++ M P
Sbjct: 66 SWFQTRL----QDSPQVPSSELMVPKCKEGE----TMQDP-------------------- 97
Query: 125 ENSVMEFEAKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRNVRPR 184
S +EFEA+S++DGAWYDV +FL+HR+L + + EV VRF GFG EEDEW+N++ +VR R
Sbjct: 98 --SELEFEARSSKDGAWYDVEAFLAHRFLSTGEAEVQVRFVGFGAEEDEWINIKTSVRQR 155
Query: 185 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRYDHDQ 244
S+P ES+EC + GD +LCFQE ++QA+Y+DAH+++ Q L+ YDHD
Sbjct: 156 SIPLESTECSNLKIGDPVLCFQERRDQAIYYDAHIVEIQKRMHDIRGCRCLLLIHYDHDN 215
Query: 245 SEE 247
SEE
Sbjct: 216 SEE 218
>Glyma04g09100.1
Length = 231
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 130/243 (53%), Gaps = 30/243 (12%)
Query: 5 PSNGGPAFRFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQMKQVW 64
P N FT E+ +ME +L+E ++ LA F+ S R GK ++ ++
Sbjct: 6 PRNRAVFSGFTNAEIEKMEKLLREPTGGSLGKEFYQKLARSFNYSSGRAGKPIIKWTEIE 65
Query: 65 NWFQNKRYAIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTAKVTP 124
+WFQ + S + P + P ++ M P
Sbjct: 66 SWFQTRL----QDSPQVPSSELMVPKCKEGE----TMQHP-------------------- 97
Query: 125 ENSVMEFEAKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRNVRPR 184
S +EFEA+S++DGAWYDV +FL+HR+L + + EV VRF GFG +EDEW+N++ +VR R
Sbjct: 98 --SELEFEARSSKDGAWYDVEAFLAHRFLSTGEAEVHVRFVGFGADEDEWINIKTSVRQR 155
Query: 185 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRYDHDQ 244
S+P ES+EC + GD +LCFQE ++QA+Y+DAH+++ Q L+RYDHD
Sbjct: 156 SIPLESTECSNLKMGDPVLCFQERRDQAIYYDAHIVEIQRRMHDIRGCRCLILIRYDHDN 215
Query: 245 SEE 247
SEE
Sbjct: 216 SEE 218
>Glyma04g09100.2
Length = 209
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 123/226 (54%), Gaps = 30/226 (13%)
Query: 22 MEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQMKQVWNWFQNKRYAIRAKSSKT 81
ME +L+E ++ LA F+ S R GK ++ ++ +WFQ + S +
Sbjct: 1 MEKLLREPTGGSLGKEFYQKLARSFNYSSGRAGKPIIKWTEIESWFQTRL----QDSPQV 56
Query: 82 PGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTAKVTPENSVMEFEAKSARDGAW 141
P + P ++ M P S +EFEA+S++DGAW
Sbjct: 57 PSSELMVPKCKEGE----TMQHP----------------------SELEFEARSSKDGAW 90
Query: 142 YDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRNVRPRSLPCESSECVAVLPGDL 201
YDV +FL+HR+L + + EV VRF GFG +EDEW+N++ +VR RS+P ES+EC + GD
Sbjct: 91 YDVEAFLAHRFLSTGEAEVHVRFVGFGADEDEWINIKTSVRQRSIPLESTECSNLKMGDP 150
Query: 202 ILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRYDHDQSEE 247
+LCFQE ++QA+Y+DAH+++ Q L+RYDHD SEE
Sbjct: 151 VLCFQERRDQAIYYDAHIVEIQRRMHDIRGCRCLILIRYDHDNSEE 196
>Glyma07g01880.2
Length = 273
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 130/246 (52%), Gaps = 18/246 (7%)
Query: 13 RFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQMKQVWNWFQNKRY 72
+ + +E+ E+E I ++ + R +A++FS S + GK ++ +QV WF+N +
Sbjct: 13 KLSSDEILELERIYEDMGGKVLNRKSCLEIAKRFSSSSNGAGKTSLSWQQVRLWFKNNQR 72
Query: 73 AIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTAKVTPENSVMEFE 132
+ K + L I S +A L G G A + + FE
Sbjct: 73 MLLGKDISSSDLLKI--------------SADLAESPLLGNGKGKQAAALDD----LGFE 114
Query: 133 AKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRNVRPRSLPCESSE 192
A+S +D AW+DV+ FL++R L + + EV VR+AGFG E+DEW+NV+ VR RS+P E SE
Sbjct: 115 ARSTKDIAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSIPLEPSE 174
Query: 193 CVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRYDHDQSEEIVPLR 252
C V GDL+LCF E ++ ALY DA ++ F+VR+ HD +EE V
Sbjct: 175 CHKVKDGDLVLCFLEREDYALYCDARIVKIHRKIHDPTECTCTFIVRFVHDNTEEGVSFD 234
Query: 253 KVCRRP 258
++C RP
Sbjct: 235 RICCRP 240
>Glyma07g01880.1
Length = 273
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 130/246 (52%), Gaps = 18/246 (7%)
Query: 13 RFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQMKQVWNWFQNKRY 72
+ + +E+ E+E I ++ + R +A++FS S + GK ++ +QV WF+N +
Sbjct: 13 KLSSDEILELERIYEDMGGKVLNRKSCLEIAKRFSSSSNGAGKTSLSWQQVRLWFKNNQR 72
Query: 73 AIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTAKVTPENSVMEFE 132
+ K + L I S +A L G G A + + FE
Sbjct: 73 MLLGKDISSSDLLKI--------------SADLAESPLLGNGKGKQAAALDD----LGFE 114
Query: 133 AKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRNVRPRSLPCESSE 192
A+S +D AW+DV+ FL++R L + + EV VR+AGFG E+DEW+NV+ VR RS+P E SE
Sbjct: 115 ARSTKDIAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSIPLEPSE 174
Query: 193 CVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRYDHDQSEEIVPLR 252
C V GDL+LCF E ++ ALY DA ++ F+VR+ HD +EE V
Sbjct: 175 CHKVKDGDLVLCFLEREDYALYCDARIVKIHRKIHDPTECTCTFIVRFVHDNTEEGVSFD 234
Query: 253 KVCRRP 258
++C RP
Sbjct: 235 RICCRP 240
>Glyma08g21560.3
Length = 273
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 136/258 (52%), Gaps = 18/258 (6%)
Query: 1 MGRPPSNGGPAFRFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQM 60
M + P P + + +E+ E+E I ++ + R + +A++FS S + GK ++
Sbjct: 1 MEKLPLTEYPFPKLSLDEILELERIYKDVVGKVFNRKLCQEIAKRFSSSSNGAGKNSLSW 60
Query: 61 KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTA 120
+QV WF+N + + + + L I S +A L G G
Sbjct: 61 QQVQLWFRNSQRMLLGEDISSSDLLKI--------------SADLADSPLLGNGK----G 102
Query: 121 KVTPENSVMEFEAKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRN 180
K + M FEA+S +D AW+DV+ FL++R L + + EV VR+AGFG E+DEW+NV+
Sbjct: 103 KQATDLDDMGFEARSTKDNAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLG 162
Query: 181 VRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRY 240
VR RS+P E SEC V GDL+LCF E ++ ALY DA ++ Q F+V++
Sbjct: 163 VRERSIPLEPSECHKVKDGDLVLCFLEKEDYALYCDARIVKIQRKIHDPTDCTCTFIVQF 222
Query: 241 DHDQSEEIVPLRKVCRRP 258
HD +EE V ++C RP
Sbjct: 223 VHDNTEEGVSFSRICCRP 240
>Glyma08g21560.2
Length = 273
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 136/258 (52%), Gaps = 18/258 (6%)
Query: 1 MGRPPSNGGPAFRFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQM 60
M + P P + + +E+ E+E I ++ + R + +A++FS S + GK ++
Sbjct: 1 MEKLPLTEYPFPKLSLDEILELERIYKDVVGKVFNRKLCQEIAKRFSSSSNGAGKNSLSW 60
Query: 61 KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTA 120
+QV WF+N + + + + L I S +A L G G
Sbjct: 61 QQVQLWFRNSQRMLLGEDISSSDLLKI--------------SADLADSPLLGNGK----G 102
Query: 121 KVTPENSVMEFEAKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRN 180
K + M FEA+S +D AW+DV+ FL++R L + + EV VR+AGFG E+DEW+NV+
Sbjct: 103 KQATDLDDMGFEARSTKDNAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLG 162
Query: 181 VRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRY 240
VR RS+P E SEC V GDL+LCF E ++ ALY DA ++ Q F+V++
Sbjct: 163 VRERSIPLEPSECHKVKDGDLVLCFLEKEDYALYCDARIVKIQRKIHDPTDCTCTFIVQF 222
Query: 241 DHDQSEEIVPLRKVCRRP 258
HD +EE V ++C RP
Sbjct: 223 VHDNTEEGVSFSRICCRP 240
>Glyma08g21560.1
Length = 273
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 136/258 (52%), Gaps = 18/258 (6%)
Query: 1 MGRPPSNGGPAFRFTQNEVAEMEAILQEHNNAMPARDVLAVLAEKFSESPDRKGKITVQM 60
M + P P + + +E+ E+E I ++ + R + +A++FS S + GK ++
Sbjct: 1 MEKLPLTEYPFPKLSLDEILELERIYKDVVGKVFNRKLCQEIAKRFSSSSNGAGKNSLSW 60
Query: 61 KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDSAPVRNMSQPIAAPILTGPGSVPTTA 120
+QV WF+N + + + + L I S +A L G G
Sbjct: 61 QQVQLWFRNSQRMLLGEDISSSDLLKI--------------SADLADSPLLGNGK----G 102
Query: 121 KVTPENSVMEFEAKSARDGAWYDVASFLSHRYLESSDPEVLVRFAGFGPEEDEWVNVRRN 180
K + M FEA+S +D AW+DV+ FL++R L + + EV VR+AGFG E+DEW+NV+
Sbjct: 103 KQATDLDDMGFEARSTKDNAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLG 162
Query: 181 VRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDSQXXXXXXXXXXXXFLVRY 240
VR RS+P E SEC V GDL+LCF E ++ ALY DA ++ Q F+V++
Sbjct: 163 VRERSIPLEPSECHKVKDGDLVLCFLEKEDYALYCDARIVKIQRKIHDPTDCTCTFIVQF 222
Query: 241 DHDQSEEIVPLRKVCRRP 258
HD +EE V ++C RP
Sbjct: 223 VHDNTEEGVSFSRICCRP 240