Miyakogusa Predicted Gene

Lj3g3v0428800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428800.1 tr|G7K4N4|G7K4N4_MEDTR Pre-mRNA-splicing factor
ISY1-like protein OS=Medicago truncatula GN=MTR_5g09,89.11,0,ISY1
domain-like,NULL; GB DEF: DBJ|BAA86474.1 (HYPOTHETICAL PROTEIN
AT3G18790/MVE11_17),NULL; FAMILY,CUFF.40722.1
         (303 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g18830.1                                                       197   1e-50
Glyma17g33660.1                                                       152   5e-37
Glyma07g35590.1                                                       125   4e-29
Glyma03g27280.1                                                        58   1e-08

>Glyma09g18830.1 
          Length = 193

 Score =  197 bits (501), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/197 (53%), Positives = 120/197 (60%), Gaps = 4/197 (2%)

Query: 107 MTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFDKPPELRKRRTRYDIYKRIDAAY 166
           MTDLDGNIVDVPNP GRGPGYRYFGAAKKLPGV+ELF+KPPELR+RRTRYDIYKRIDA+Y
Sbjct: 1   MTDLDGNIVDVPNPGGRGPGYRYFGAAKKLPGVKELFEKPPELRRRRTRYDIYKRIDASY 60

Query: 167 YGYRDDEDGILERLEPSXXXXXXXXXXXXWYRLDRIRQEARKGVKSGEVAEVSAAVXXXX 226
           YGYRD+EDG+L RLE              W RLD +R+EARK V SGEVAEV+A      
Sbjct: 61  YGYRDEEDGVLARLEGPAEEAMRREAAEEWRRLDEVRREARKWVVSGEVAEVTAVAREVL 120

Query: 227 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFVVHVPLPDXXXXXXXXXXXXXXXXXNKYVSE 286
                                          HVPLPD                 ++Y SE
Sbjct: 121 KEDEEEVVEEERAREREEERERREFVV----HVPLPDEKEIERRVLEKKKKDLLSRYASE 176

Query: 287 DLMDEQSEAKDMLNIHR 303
            L++EQ+EAKDMLNI R
Sbjct: 177 GLVEEQTEAKDMLNIQR 193


>Glyma17g33660.1 
          Length = 187

 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 1/103 (0%)

Query: 79  NKLIREKSHWERRIVELGGPNYTRHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPG 138
           N +++ K      +V   GPNY +HSAKMTDL+ NI+DVPNP G GPGYRYF AAKKLPG
Sbjct: 19  NSIVKTKGFCPFSLVT-NGPNYVKHSAKMTDLNENIIDVPNPRGCGPGYRYFEAAKKLPG 77

Query: 139 VRELFDKPPELRKRRTRYDIYKRIDAAYYGYRDDEDGILERLE 181
           V+ELF+KPP+L KRRT YDIYK IDA+YYGYRD+EDG+LERLE
Sbjct: 78  VKELFEKPPDLCKRRTLYDIYKWIDASYYGYRDEEDGVLERLE 120


>Glyma07g35590.1 
          Length = 153

 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 85/121 (70%), Gaps = 13/121 (10%)

Query: 40  LSEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPN 99
           LS A  WR  +MREI RKVAEIQN GL EH LR+LND+INK+I +KSHWE RIVEL  PN
Sbjct: 16  LSFATSWRSTVMREIDRKVAEIQNRGLDEHCLRNLNDKINKVISKKSHWECRIVELDRPN 75

Query: 100 YTRHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFDKPPELRKRRTRYDIY 159
           Y +HSAK+T+L+G IVDVPN    G   R   ++ K P       +PP+L+K  T+YDI+
Sbjct: 76  YLKHSAKITNLNGIIVDVPN---LGEPSR---SSLKTP-------QPPKLQKWHTQYDIF 122

Query: 160 K 160
           K
Sbjct: 123 K 123


>Glyma03g27280.1 
          Length = 45

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/45 (68%), Positives = 32/45 (71%)

Query: 1  MARNEEKAQSMLNRFITMKAXXXXXXXXXXXFLATECRDLSEADK 45
          MARNEEKAQSMLNRFITMKA           F  +ECRDLSEADK
Sbjct: 1  MARNEEKAQSMLNRFITMKAEEKKKPKERRPFPTSECRDLSEADK 45