Miyakogusa Predicted Gene

Lj3g3v0427330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0427330.1 tr|F2CWA5|F2CWA5_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,30.14,1e-17,seg,NULL,CUFF.40695.1
         (400 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g33100.1                                                       191   2e-48
Glyma14g28000.1                                                       132   6e-31
Glyma06g24570.1                                                       132   9e-31
Glyma13g34490.1                                                       131   2e-30
Glyma12g35890.1                                                       124   2e-28
Glyma12g35900.1                                                       117   2e-26
Glyma08g26970.1                                                       113   4e-25
Glyma08g41730.1                                                       106   5e-23
Glyma06g24560.1                                                       103   5e-22

>Glyma06g33100.1 
          Length = 256

 Score =  191 bits (484), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/159 (57%), Positives = 110/159 (69%), Gaps = 5/159 (3%)

Query: 102 PDPGPEWPCPASPDPKPTTGWGSSKPH---SDPPPAVSPEEKERLAALQAQHKACKVFRE 158
           PDPGPEWPCP  P+P PTTGW   KP    + PPP V+PEEKERL A+QAQHKACK  +E
Sbjct: 98  PDPGPEWPCPVRPEPSPTTGWAQPKPKPGSASPPPEVAPEEKERLVAMQAQHKACKALKE 157

Query: 159 FLCASXXXXXXXXXXXXXXXXXXXX--FVGVFMEDDELRRYYQKYFENGDFSCLVCGAVG 216
           FL  +                      F+ +F+ED ELR YYQ+ +ENG F CLVCGA+G
Sbjct: 158 FLSNNYDDDDDDDDDDDESECEEIEEFFLVLFLEDHELRGYYQRCYENGLFCCLVCGAIG 217

Query: 217 KKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCK 255
           KKNSGK+FKDCVGL+QHSMS+LR +++R HR FG A+CK
Sbjct: 218 KKNSGKRFKDCVGLLQHSMSILRTMKKRVHRGFGMALCK 256



 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/23 (86%), Positives = 22/23 (95%)

Query: 1  MDPYDEERLRNEVIYLHSLWHQG 23
          MDPYDE+RLR+EVIYLH LWHQG
Sbjct: 1  MDPYDEKRLRDEVIYLHYLWHQG 23


>Glyma14g28000.1 
          Length = 188

 Score =  132 bits (332), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 96/181 (53%), Gaps = 15/181 (8%)

Query: 104 PGPEWPC--PASPDPKPTTGWGS--SKPHSDPPPAVSPEEKERLAALQAQHKACKVFREF 159
            G EW    P +       GW S      S    ++S EEK  +A LQ QH+A +  ++F
Sbjct: 1   SGAEWESESPKAGFSSTALGWPSFDDIKSSSLTYSLSAEEKATMAVLQLQHRALEACQKF 60

Query: 160 LCA----------SXXXXXXXXXXXXXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSC 209
           L                                 F  VF ED +LRRYY+   + GDF C
Sbjct: 61  LVGDAGSDSDEDDEEAEDDELLDNDSKESEEYKFFEKVFAEDGDLRRYYENNHKEGDFYC 120

Query: 210 LVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVM 269
           LVCG +GKK   K+FKDC+GL+QHS ++LR  R+RAHRA+ Q +CKV+GWDID++P IV+
Sbjct: 121 LVCGGIGKK-VWKRFKDCIGLIQHSTAILRTRRKRAHRAYAQVICKVVGWDIDQMPAIVL 179

Query: 270 K 270
           K
Sbjct: 180 K 180


>Glyma06g24570.1 
          Length = 282

 Score =  132 bits (331), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 103/201 (51%), Gaps = 17/201 (8%)

Query: 105 GPEWPC--PASPDPKPTTGWGS--SKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFL 160
           G EW    P +      +GW S      S    ++S EEK  +A LQ QH+A +  ++FL
Sbjct: 9   GAEWESESPKAGFSSTASGWPSFDDIKSSSLTYSLSAEEKATVAVLQLQHRALEACQKFL 68

Query: 161 CA----------SXXXXXXXXXXXXXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSCL 210
                                            F  VF ED +LRRYY+   + GDF CL
Sbjct: 69  VGDAGSDSDEDDEEAEDDELLDNDSKESEEYKFFEKVFAEDGDLRRYYENNHKEGDFYCL 128

Query: 211 VCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVMK 270
           VCG +G K   K+FKDC+GL+QHS ++LR  R+RAHRA+ Q +CKV+GWDID++P IV+K
Sbjct: 129 VCGGIGNK-VWKRFKDCIGLIQHSTAILRTRRKRAHRAYAQVICKVVGWDIDQMPAIVLK 187

Query: 271 --GEPLGCSAQAESEPKENVA 289
                L  S +   EPK  V 
Sbjct: 188 DLDSSLAGSRKLFVEPKNLVV 208


>Glyma13g34490.1 
          Length = 485

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 109/217 (50%), Gaps = 21/217 (9%)

Query: 107 EWPC--PASPDPKPTTGWGS--SKPHSDPPPAVSPEEKERLAALQAQHKACKVFREFLCA 162
           EW    P +      +GW S      S    ++S EEK  +A LQ QH+A +  ++FL  
Sbjct: 270 EWESESPKAGFSSTASGWPSFDDIKSSSLTYSLSAEEKATVAVLQLQHRALEACQKFLVG 329

Query: 163 SXXXXXXXXXXX-----------XXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSCLV 211
                                           F  VF ED +LRRYY+   + GDF CLV
Sbjct: 330 DAGSDSDEDDEEAEDEDELVDNDSEESEEYKFFEKVFAEDGDLRRYYENNHKEGDFYCLV 389

Query: 212 CGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVMK- 270
           CG +GKK   K+FKDC+GL+QHS ++LR  R+RAHRA+ Q +CKV+GWDID++P IV+K 
Sbjct: 390 CGGIGKK-VWKRFKDCIGLIQHSTAILRTRRKRAHRAYAQVICKVVGWDIDQMPAIVLKD 448

Query: 271 -GEPLGCSAQAESEPKENVAA---DDDRQGGSDKSDD 303
               L  S +   EPK   A    D +  G +  S D
Sbjct: 449 LDSSLAGSRKLFVEPKNPAAGCTDDTNSNGEATNSTD 485



 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 111/222 (50%), Gaps = 19/222 (8%)

Query: 107 EWPC--PASPDPKPTTGWGSSKPHSDPPP--AVSPEEKERLAALQAQHKACKVFREFLCA 162
           +W C  P +      +GW S      PP   ++S EEK  +A LQ QHKA +  ++FL  
Sbjct: 44  KWVCESPKAGVSSTASGWPSFNDIKAPPLTYSLSAEEKATVAVLQLQHKALEACQKFLVG 103

Query: 163 SXXXXXXXXXXXXXXX------------XXXXXFVGVFMEDDELRRYYQKYFENGDFSCL 210
                                            F  VF ED +LRRYY+   + GDF CL
Sbjct: 104 DAGSDGDEDDKDDEDEDELVDDYDSKECEEYKFFEKVFAEDGDLRRYYESNHKEGDFHCL 163

Query: 211 VCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVMK 270
           VCG +GKK   K+FK+C  L+ HS ++LR  R+RAHRA+ Q +CKV+GWDID+LP IV+K
Sbjct: 164 VCGGIGKK-VWKRFKNCKTLIHHSTAILRTKRKRAHRAYAQVICKVVGWDIDQLPAIVLK 222

Query: 271 --GEPLGCSAQAESEPKENVAADDDRQGGSDKSDDEVVPLEH 310
                L  S +     KE+V+ D      S ++  E+V   H
Sbjct: 223 DLDSSLTGSRKLLGCEKESVSLDGKVLEPSSENGGEIVKESH 264


>Glyma12g35890.1 
          Length = 230

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 93/181 (51%), Gaps = 17/181 (9%)

Query: 106 PEWPC--PASPDPKPTTGWGSSKPHSDPPP--AVSPEEKERLAALQAQHKACKVFREFLC 161
            EW C  P +      +GW S       P   ++S EEK  +A LQ QHKA +  ++FL 
Sbjct: 43  AEWVCKSPKAGVSSTASGWPSFDDIKASPLTYSLSAEEKATVAVLQLQHKALEACQKFLV 102

Query: 162 A------------SXXXXXXXXXXXXXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSC 209
                                             F  VF ED +LRRYY+   + GDF C
Sbjct: 103 GDAGSDSDEDDKDDEDEDELVDDYDSKECEEYKFFEKVFAEDGDLRRYYESNHKEGDFYC 162

Query: 210 LVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVM 269
           LVCG +GKK   K+FK+C  L+ HS ++LR  R+RAHRA+ Q +CKV GWDID+LP IV+
Sbjct: 163 LVCGGIGKK-VWKRFKNCKTLIHHSTAILRTKRKRAHRAYAQVICKVFGWDIDQLPAIVL 221

Query: 270 K 270
           K
Sbjct: 222 K 222


>Glyma12g35900.1 
          Length = 213

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 25/160 (15%)

Query: 135 VSPEEKERLAALQAQHKACKVFREFLCASXXX------------------------XXXX 170
           +S EEK  +A LQ QHKA +  R+FL                                  
Sbjct: 18  LSAEEKATVAVLQLQHKALEACRKFLVGDAGSDGDEDNNDYAGSDRDEDDDEEEEEEDEL 77

Query: 171 XXXXXXXXXXXXXFVGVFMEDDELRRYYQKYFENGDFSCLVCGAVGKKNSGKKFKDCVGL 230
                        F  +F ED +LRRYY+   + GDF CLVCG +GKK   K+FKDCVGL
Sbjct: 78  VDNDSKECEEYKFFEKLFAEDGDLRRYYESNHKEGDFYCLVCGGIGKK-VWKRFKDCVGL 136

Query: 231 VQHSMSVLRGVRRRAHRAFGQAVCKVLGWDIDRLPTIVMK 270
           + HS ++L+  R+RAHRA+ + +CK++GW ID+LPTIV+K
Sbjct: 137 IHHSTAILKTKRKRAHRAYARVICKIVGWGIDQLPTIVLK 176


>Glyma08g26970.1 
          Length = 190

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 1/87 (1%)

Query: 184 FVGVFMEDDELRRYYQKYFENGDFSCLVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRR 243
           F  VF ED +LRRYY+  ++ GDF CLVCG +GKK   K+FK+C  L+ HS ++LR  R+
Sbjct: 54  FEKVFAEDGDLRRYYESNYKEGDFHCLVCGGIGKK-VWKRFKNCKTLIHHSTAILRTKRK 112

Query: 244 RAHRAFGQAVCKVLGWDIDRLPTIVMK 270
           RAHRA+ Q +CKV+GWDID+LP IV+K
Sbjct: 113 RAHRAYAQVICKVVGWDIDQLPAIVLK 139


>Glyma08g41730.1 
          Length = 79

 Score =  106 bits (264), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 1/79 (1%)

Query: 184 FVGVFMEDDELRRYYQKYFENGDFSCLVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRR 243
           F  VF ED +LRRYY    + GDF CLVCG +G K   K+FKDC+GL+QHS ++LR  R+
Sbjct: 2   FEKVFAEDGDLRRYYDNNHKEGDFYCLVCGGIGNK-VWKRFKDCIGLIQHSTAILRTRRK 60

Query: 244 RAHRAFGQAVCKVLGWDID 262
           RAHRA+ Q + KV+GWDID
Sbjct: 61  RAHRAYAQVIYKVVGWDID 79


>Glyma06g24560.1 
          Length = 145

 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 1/84 (1%)

Query: 184 FVGVFMEDDELRRYYQKYFENGDFSCLVCGAVGKKNSGKKFKDCVGLVQHSMSVLRGVRR 243
           F  VF ED +LRRYY+   + GDF CLVCG +GKK    +FK+C  L+ HS ++LR  R+
Sbjct: 32  FEKVFAEDGDLRRYYESNQKEGDFHCLVCGGIGKK-VWIRFKNCKTLIHHSTAILRTKRK 90

Query: 244 RAHRAFGQAVCKVLGWDIDRLPTI 267
           RAHRA+ Q +CKV+GWDID+LP I
Sbjct: 91  RAHRAYAQVICKVVGWDIDQLPAI 114