Miyakogusa Predicted Gene

Lj3g3v0427320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0427320.1 Non Chatacterized Hit- tr|I1LSU1|I1LSU1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,70.37,0.00000000000009,HAD-like,HAD-like domain; Glucocorticoid
receptor-like (DNA-binding domain),NULL;
PARP_ZN_FINGER_2,Z,CUFF.40693.1
         (380 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g33080.1                                                       422   e-118
Glyma12g18250.1                                                       236   3e-62

>Glyma06g33080.1 
          Length = 257

 Score =  422 bits (1086), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/249 (82%), Positives = 223/249 (89%), Gaps = 1/249 (0%)

Query: 131 HDCSEEKVSKATEDIQNEQKETEESDSKKRKLSTSDVKAVVDISFSVSDVMSKYKDATLL 190
           +D SEEKV  A ED+QNE +ETEE DSK+ KL T D+KAVV+I FSVSDV S Y+DATLL
Sbjct: 8   NDKSEEKVLNAIEDVQNEPQETEEHDSKRFKLCTPDIKAVVNIKFSVSDVKSNYRDATLL 67

Query: 191 PKWKAFQTVIFLERDDGLHDSSKIAAFDFDGCLANTAVNRVGPKAWSLMYQSIPDKLQSL 250
           PKWKAFQTVIFLERDDGL+DSSKIAAFDFDGCLANT V RVG  AWSLM+ SIPDKLQSL
Sbjct: 68  PKWKAFQTVIFLERDDGLYDSSKIAAFDFDGCLANTDVKRVGENAWSLMHSSIPDKLQSL 127

Query: 251 YNNGYKLVIFTNESNIERWKKSRQKAVDSKIGRLNNFIEKVKVPIQVFIACGL-SNSGKA 309
           YN+GYKLVIFTNESNIERWK  RQ AVDSKIGRLNNFIEKVKVP+QV+IACG+ S SGKA
Sbjct: 128 YNDGYKLVIFTNESNIERWKNKRQVAVDSKIGRLNNFIEKVKVPVQVYIACGVGSKSGKA 187

Query: 310 AGKEDDPYRKPKPGMWQLMEQHFNSGITIDMDQSFYVGDAAGRKSDHSDADIKFAEAIGL 369
             KEDDP+RKPKPGMW LMEQHFNSGI IDMDQSFYVGDAAGR+SDHSDADIKFAEAIGL
Sbjct: 188 DKKEDDPFRKPKPGMWHLMEQHFNSGIAIDMDQSFYVGDAAGRESDHSDADIKFAEAIGL 247

Query: 370 KFHLPEEYF 378
           KF++PEEYF
Sbjct: 248 KFYVPEEYF 256


>Glyma12g18250.1 
          Length = 946

 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/223 (59%), Positives = 148/223 (66%), Gaps = 43/223 (19%)

Query: 118 SSDQEAVKELFESHDCSEEK---------------VSKATEDIQN--------------- 147
           SSDQEA+K+LF  ++ SEEK               ++ +    QN               
Sbjct: 175 SSDQEALKKLFAENNKSEEKPLGKIPLAWNSWINLITSSLISCQNFLINLKFSPSGPGLL 234

Query: 148 -------EQKETEESDSKKRK------LSTSDVKAVVDISFSVSDVMSKYKDATLLPKWK 194
                    K +  S   K++      L T DVKAVV+I FSVSDV S YKDATLLPKWK
Sbjct: 235 SLPHLIFSMKASFSSPPAKKQNQIISYLCTPDVKAVVNIKFSVSDVKSNYKDATLLPKWK 294

Query: 195 AFQTVIFLERDDGLHDSSKIAAFDFDGCLANTAVNRVGPKAWSLMYQSIPDKLQSLYNNG 254
           AFQTVIFLERDDGLHDSSKIAAFDFDGCL  T V RVG  AWSLM+ SIPDKLQSLYN+G
Sbjct: 295 AFQTVIFLERDDGLHDSSKIAAFDFDGCLVKTDVKRVGADAWSLMHSSIPDKLQSLYNDG 354

Query: 255 YKLVIFTNESNIERWKKSRQKAVDSKIGRLNNFIEKVKVPIQV 297
           YKLVIFTNESNIERWK  RQ AVDSKIGRLNNFI KVKVP+Q+
Sbjct: 355 YKLVIFTNESNIERWKNKRQVAVDSKIGRLNNFIVKVKVPVQL 397



 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 67/121 (55%), Gaps = 28/121 (23%)

Query: 45  MATPESIKAEYAKSNRSSCKGCSKTIENKSLRLGIVSKDKTRGFETVKWHHLTCFP--PP 102
           MA  ES+ A+YAKS +SSC+ CS+ IE K+LRL  VSK     ++ VKWHHL CFP    
Sbjct: 1   MAARESMMADYAKSGKSSCRACSQKIEAKALRLASVSKGNG-PYDIVKWHHLRCFPLSSH 59

Query: 103 YPDSPHIITGFSSL-------------------------ESSDQEAVKELFESHDCSEEK 137
              SP  I GFSSL                         +SSDQEA+K+LF  ++ SEEK
Sbjct: 60  SHSSPESIRGFSSLKKTEDPNYKCKFQTQVVYARFELRRQSSDQEALKKLFAENNKSEEK 119

Query: 138 V 138
           V
Sbjct: 120 V 120



 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 42/54 (77%), Gaps = 1/54 (1%)

Query: 289 EKVKVPIQVFIACGL-SNSGKAAGKEDDPYRKPKPGMWQLMEQHFNSGITIDMD 341
           E  ++   VFIACG+ S SGK   KEDDP+RKPKPGMW LMEQHFNSGI IDMD
Sbjct: 892 ESCQLGKHVFIACGVGSKSGKVNKKEDDPFRKPKPGMWHLMEQHFNSGIAIDMD 945