Miyakogusa Predicted Gene

Lj3g3v0424000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0424000.1 Non Chatacterized Hit- tr|I1J1V7|I1J1V7_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.83,0.00000000000001,seg,NULL,CUFF.40671.1
         (230 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g41170.1                                                       246   1e-65
Glyma04g21850.1                                                        77   1e-14
Glyma01g27860.1                                                        75   8e-14
Glyma10g25820.1                                                        54   1e-07

>Glyma15g41170.1 
          Length = 251

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/235 (58%), Positives = 171/235 (72%), Gaps = 9/235 (3%)

Query: 4   EQNQRMMKNESNGEKSKALMTRDLLGGSS-IESQELDLDMRVPSGWEKRLDLQSGKLYIQ 62
           E+  R + NES+GEKS AL+TRDLLGGSS IESQELDLD++VPSGWEKRLDLQSGK+Y+Q
Sbjct: 18  EEQHRTVGNESHGEKSTALITRDLLGGSSSIESQELDLDLQVPSGWEKRLDLQSGKVYLQ 77

Query: 63  RHNSL--ASPVSEH-KCQQNQAGPQLKDLKF-TPPSSKIPLNLFYDTSLDLKLVSYSLPL 118
           + N+   + P+ +H K     AGP+L+DL F +  +S + LNLF +TSLDLKLVS +LP 
Sbjct: 78  KCNTTIGSPPIYDHNKLNAKPAGPKLQDLNFPSSSTSNVLLNLFDETSLDLKLVSSTLPS 137

Query: 119 SNNYESVCTLDKVKSALERAEKEPAILRKRAXXXXXXXXXXXXXXXXXXXXI---ITQEE 175
           SNNY+SVCTLDKVKSALERAEKEP I+RKR                     I   I +EE
Sbjct: 138 SNNYQSVCTLDKVKSALERAEKEP-IVRKRTSFLKSPLSASSPSYSSSSSSIRETIQEEE 196

Query: 176 EECEVKILASPVATGCPGCLTYVLVTKNNPKCPRCNTNVPFRLMKKPRLDLNLSI 230
            E  + + +SP+A GCPGCL+YV++ KNNPKCPRCN+ VP   MKKPR+DLN+SI
Sbjct: 197 CEERLNVSSSPLAAGCPGCLSYVMIMKNNPKCPRCNSLVPIPSMKKPRIDLNISI 251


>Glyma04g21850.1 
          Length = 103

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 4/63 (6%)

Query: 87  DLKFTPPSSKIPLNLFYDTSLDLKLVSYSLPLSNNYESVCTLDKVKSALERAEKEPAILR 146
           +++  P S++   +LF +TSLDLKLVS +LP SNNY+SVCTLDKVKSALERAEKEP I+R
Sbjct: 10  NIRIDPHSTR---HLFDETSLDLKLVSSTLPSSNNYQSVCTLDKVKSALERAEKEP-IVR 65

Query: 147 KRA 149
           KR 
Sbjct: 66  KRT 68


>Glyma01g27860.1 
          Length = 53

 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 44/50 (88%)

Query: 100 NLFYDTSLDLKLVSYSLPLSNNYESVCTLDKVKSALERAEKEPAILRKRA 149
           +LF +TSLDLKLVS +LP SNNY+SVCTLDKVKSALERAEKEP + ++ +
Sbjct: 1   HLFDETSLDLKLVSSTLPSSNNYQSVCTLDKVKSALERAEKEPIVWKRTS 50


>Glyma10g25820.1 
          Length = 69

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 8/71 (11%)

Query: 58  KLYIQRHNSL--ASPVSEH-KCQQNQAGPQLKDLKFTPPSS---KIPLNLFYDTSLDLKL 111
           K+Y+Q+ N+   + P+S+H K     AGP+L+DL F  PSS    + LNLF +TS+DLKL
Sbjct: 1   KVYLQKCNTTIGSPPISDHNKLNAKPAGPKLQDLNF--PSSSTFNVLLNLFDETSMDLKL 58

Query: 112 VSYSLPLSNNY 122
           VS +LP  NNY
Sbjct: 59  VSSTLPSRNNY 69