Miyakogusa Predicted Gene

Lj3g3v0422710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0422710.1 Non Chatacterized Hit- tr|I1MI58|I1MI58_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53483
PE,84.75,0,RECA_2,DNA recombination/repair protein RecA/RadB,
ATP-binding domain; DNA REPAIR PROTEIN RECA,DNA r,CUFF.40664.1
         (253 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g27640.1                                                       384   e-107
Glyma15g18590.1                                                       164   1e-40
Glyma09g07400.1                                                       163   2e-40
Glyma17g06180.1                                                       143   2e-34
Glyma17g06180.2                                                       143   2e-34
Glyma19g31600.1                                                       128   6e-30
Glyma13g16490.1                                                        77   2e-14
Glyma03g28880.1                                                        69   3e-12

>Glyma15g27640.1 
          Length = 414

 Score =  384 bits (985), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/223 (85%), Positives = 204/223 (91%), Gaps = 6/223 (2%)

Query: 22  MDLVFPLKPHTLILNAP-SSSLFLPRRLPVKFRSLSPLCASKHVKIQCELEGKINGALSG 80
           MDL+FPLKPH +IL AP SSSL  P   P++FR+++   A KH  IQCELEG+ NGALSG
Sbjct: 1   MDLMFPLKPHCVILKAPLSSSLLFP--FPLRFRAVT---AFKHANIQCELEGRPNGALSG 55

Query: 81  DLDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 140
           D DPRFIDRQKALEAAMNDINN+FGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 56  DFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 115

Query: 141 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 200
           GRI+EI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ
Sbjct: 116 GRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 175

Query: 201 PDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEVNIGF 243
           PD+GEMALEIADRMCRSGA+DLICVDSVSALTPRAEIE  IG 
Sbjct: 176 PDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGM 218


>Glyma15g18590.1 
          Length = 371

 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 2/156 (1%)

Query: 89  RQKALEAAMNDINNSFGKGSVTRLG-SAGGALVETFPSGCLTLDCALG-GGLPKGRIVEI 146
           +  AL+ A++ I +++GKGS+  LG S     V    +G   LD ALG GGLPKGR+VEI
Sbjct: 4   KDMALQQAIDQITSAYGKGSIMWLGRSMAPKNVPVVSTGSFALDIALGVGGLPKGRVVEI 63

Query: 147 FGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEM 206
           FGPE+SGKTTLALH IAE QKLGG    VDAEHA D   ++++GVD +NL++ QPD GE 
Sbjct: 64  FGPEASGKTTLALHMIAEAQKLGGYCAFVDAEHALDKTLAESIGVDTKNLLLSQPDCGEQ 123

Query: 207 ALEIADRMCRSGAVDLICVDSVSALTPRAEIEVNIG 242
           AL + D + RSG+VD I VDSV+AL P+ E++  +G
Sbjct: 124 ALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGEMG 159


>Glyma09g07400.1 
          Length = 439

 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/183 (48%), Positives = 119/183 (65%), Gaps = 8/183 (4%)

Query: 62  KHVKIQCELEGKINGALSGDLDPRFIDRQKALEAAMNDINNSFGKGSVTRLG-SAGGALV 120
           KH K + + +G  +G      +     +  AL+ A++ I +++GKGS+  LG S     V
Sbjct: 49  KHSKRRSKSDGSDSG------EENLSKKDLALQQAIDQITSAYGKGSIMWLGRSVAPKNV 102

Query: 121 ETFPSGCLTLDCALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEH 179
               +G   LD ALG GGLPKGR+VEIFGPE+SGKTTLALH IAE QK GG    VDAEH
Sbjct: 103 PVVSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCAFVDAEH 162

Query: 180 AFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEV 239
           A D   ++++GVD +NL++ QPD GE AL + D + RSG+VD I VDSV+AL P+ E++ 
Sbjct: 163 ALDKTLAESIGVDTKNLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDG 222

Query: 240 NIG 242
            +G
Sbjct: 223 EMG 225


>Glyma17g06180.1 
          Length = 459

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 118/172 (68%), Gaps = 4/172 (2%)

Query: 73  KINGALSGDLDPRFIDRQKALEAAMNDINNSFGKGSVTRLG-SAGGALVETFPSGCLTLD 131
           K +G+ SG+       ++ AL+ A++ I ++FGKGS+  LG S     V    +G   LD
Sbjct: 69  KSDGSDSGE--ENMSKKELALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFALD 126

Query: 132 CALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALG 190
            ALG GGLPKGR+VEI+GPE+SGKTTLALH IAE QK GG  + VDAEHA D   ++++G
Sbjct: 127 VALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIG 186

Query: 191 VDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEVNIG 242
           V+  NL++ QPD GE AL + D + RSG+VD++ VDSV+AL P+ E++  +G
Sbjct: 187 VNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMG 238


>Glyma17g06180.2 
          Length = 423

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 118/172 (68%), Gaps = 4/172 (2%)

Query: 73  KINGALSGDLDPRFIDRQKALEAAMNDINNSFGKGSVTRLG-SAGGALVETFPSGCLTLD 131
           K +G+ SG+       ++ AL+ A++ I ++FGKGS+  LG S     V    +G   LD
Sbjct: 33  KSDGSDSGE--ENMSKKELALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFALD 90

Query: 132 CALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALG 190
            ALG GGLPKGR+VEI+GPE+SGKTTLALH IAE QK GG  + VDAEHA D   ++++G
Sbjct: 91  VALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIG 150

Query: 191 VDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEVNIG 242
           V+  NL++ QPD GE AL + D + RSG+VD++ VDSV+AL P+ E++  +G
Sbjct: 151 VNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMG 202


>Glyma19g31600.1 
          Length = 386

 Score =  128 bits (322), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)

Query: 83  DPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGAL-VETFPSGCLTLDCALG-GGLPK 140
           D +  ++  AL  A++ + + F K S+  L    G        +G L LD ALG GGLPK
Sbjct: 54  DVKAAEKDNALCLAVSQLASEFSKESMLSLQKIFGVRRAHVISTGSLKLDLALGIGGLPK 113

Query: 141 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQ 200
           GRIVEI+G E++GKTTLA+  I E QKLGG    +D E+A D +  +++G+D ENL++  
Sbjct: 114 GRIVEIYGREAAGKTTLAIQIIKEAQKLGGYCAYLDVENALDFSLMESMGIDTENLLISH 173

Query: 201 PDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIE 238
           PD  E  L + D + +SGAVD+I +DSV+AL P+ E++
Sbjct: 174 PDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKCELD 211


>Glyma13g16490.1 
          Length = 369

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 3/157 (1%)

Query: 89  RQKALEAAMNDINNSFGKGSVTRLG-SAGGALVETFPSGCLTLDCALG-GGLPKG-RIVE 145
           ++ AL+ A++ I ++FG GS+  LG S     +    +G   LD AL  GGLP   +   
Sbjct: 38  KELALQQALDQITSAFGNGSIMWLGRSVSPKSLPVVSTGSFALDVALVIGGLPGFCKNNS 97

Query: 146 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGE 205
            F  +  G     L +   +  + G  + VDAEHA D   ++++GV+  NL++ QPD GE
Sbjct: 98  CFTCDCRGTEARRLSSYNALTMIFGYCVFVDAEHALDKKLAESIGVNTTNLLLSQPDCGE 157

Query: 206 MALEIADRMCRSGAVDLICVDSVSALTPRAEIEVNIG 242
            AL + D + RSG+VD+I VDSV+AL P+ E++  +G
Sbjct: 158 QALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMG 194


>Glyma03g28880.1 
          Length = 213

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 3/75 (4%)

Query: 126 GCLTLDCALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 184
           G L L  ALG  GLPKGRIVEI+G +++GKTT+AL  I E QKLGG    +D E+A D +
Sbjct: 65  GSLKLHLALGIRGLPKGRIVEIYGRDAAGKTTIALRIIKEAQKLGGYCAYLDVENALDFS 124

Query: 185 YSKALGVDVENLIVC 199
             +++G  VE +++C
Sbjct: 125 LMESMG--VEGVMIC 137