Miyakogusa Predicted Gene

Lj3g3v0421680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0421680.1 Non Chatacterized Hit- tr|I3SVJ6|I3SVJ6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.5,0,Mss4-like,Mss4-like; TIGR00357: methionine-R-sulfoxide
reductase,Peptide methionine sulphoxide reduc,CUFF.40662.1
         (201 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g25610.1                                                       289   1e-78
Glyma13g32680.1                                                       113   2e-25
Glyma15g06650.1                                                       113   2e-25
Glyma13g28320.1                                                       103   1e-22
Glyma15g10750.1                                                       103   1e-22
Glyma13g28320.2                                                        78   5e-15
Glyma15g06650.2                                                        75   4e-14

>Glyma08g25610.1 
          Length = 202

 Score =  289 bits (739), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 140/202 (69%), Positives = 159/202 (78%), Gaps = 1/202 (0%)

Query: 1   MASYSLSLPTMHVASIKLIPKLDSKVLLCPSPPAYT-KLTXXXXXXXXXXXXXXXXXNQA 59
           MAS SLSLP  H+   ++I KLDSK LL PS      +                     A
Sbjct: 1   MASQSLSLPPTHIPYNRIIGKLDSKFLLWPSCAHIKPRRISTSIRAMGSSASSHSQSQYA 60

Query: 60  DKIETQSGAGSVDYKSLSNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCIC 119
           D +E+++GA ++DYKSL+++EWKKRLTNEQFY+TRQKGTERAFTGEYWNTKTPG Y+CIC
Sbjct: 61  DSVESEAGADTIDYKSLTDEEWKKRLTNEQFYITRQKGTERAFTGEYWNTKTPGIYHCIC 120

Query: 120 CDTPLFESSSKFNSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVFDD 179
           CDTPLFESS+KFNSGTGWPSY Q IG NVKSKLDLS+IFMPRQEVLCAVCDAHLGHVFDD
Sbjct: 121 CDTPLFESSTKFNSGTGWPSYYQTIGKNVKSKLDLSIIFMPRQEVLCAVCDAHLGHVFDD 180

Query: 180 GPPPTGKRYCINSASLKLKTKQ 201
           GPPPTGKR+CINSA+LKLK KQ
Sbjct: 181 GPPPTGKRFCINSAALKLKPKQ 202


>Glyma13g32680.1 
          Length = 202

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 79/138 (57%), Gaps = 8/138 (5%)

Query: 62  IETQSGAGSVDYKSLSNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCD 121
           I   + AGS+     S +EW+  L+ EQF + RQKGTE   TGEY      G YNC  C 
Sbjct: 66  IVAMAAAGSLRK---SEEEWRAVLSPEQFRILRQKGTEFPGTGEYDKFFDEGVYNCAGCG 122

Query: 122 TPLFESSSKFNSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DD 179
           TPL+ S +KFNSG GWP++ + I   +    D   +   R E+ CA C  HLGHVF  + 
Sbjct: 123 TPLYRSLTKFNSGCGWPAFYEGIPGAINRNPDPDGM---RTEITCAACGGHLGHVFKGEG 179

Query: 180 GPPPTGKRYCINSASLKL 197
            P PT +R+C+NS SLK 
Sbjct: 180 FPTPTNERHCVNSISLKF 197


>Glyma15g06650.1 
          Length = 204

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 73/123 (59%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           S +EW+  L+ EQF + RQKGTE   TGEY      G YNC  C TPL+ S +KFNSG G
Sbjct: 78  SEEEWRAILSPEQFRILRQKGTEFPGTGEYDKFYEEGVYNCAGCGTPLYRSITKFNSGCG 137

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ + I   +    D   +   R E+ CA C  HLGHVF  +  P PT +R+C+NS S
Sbjct: 138 WPAFYEGIPGAINRNPDPDGM---RTEITCAACGGHLGHVFKGEGFPTPTNERHCVNSIS 194

Query: 195 LKL 197
           LK 
Sbjct: 195 LKF 197


>Glyma13g28320.1 
          Length = 138

 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           + +EWK  L+ EQF + RQKGTE   TGEY      G YNC  C TPL++SS+KF+SG G
Sbjct: 10  TEEEWKVILSPEQFRILRQKGTELKGTGEYNKFYEEGIYNCAGCGTPLYKSSTKFDSGCG 69

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ +     +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS S
Sbjct: 70  WPAFFEGFPGAIDRSPDPD---GRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSIS 126

Query: 195 LKL 197
           +K 
Sbjct: 127 VKF 129


>Glyma15g10750.1 
          Length = 138

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           + +EWK  L+ EQF + RQKGTE   TGEY      G YNC  C TPL++SS+KF+SG G
Sbjct: 10  TEEEWKVILSPEQFRILRQKGTELKGTGEYNKFFEEGIYNCAGCGTPLYKSSTKFDSGCG 69

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ +     +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS S
Sbjct: 70  WPAFFEGFPGAINRTPDPD---GRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSIS 126

Query: 195 LKL 197
           +K 
Sbjct: 127 VKF 129


>Glyma13g28320.2 
          Length = 109

 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 103 TGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQ 162
           TGEY      G YNC  C TPL++SS+KF+SG GWP++ +     +    D       R 
Sbjct: 7   TGEYNKFYEEGIYNCAGCGTPLYKSSTKFDSGCGWPAFFEGFPGAIDRSPDPD---GRRT 63

Query: 163 EVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASLKL 197
           E+ CA C  HLGHVF  +    PT +R+C+NS S+K 
Sbjct: 64  EITCAACGGHLGHVFKGEGFKTPTDERHCVNSISVKF 100


>Glyma15g06650.2 
          Length = 160

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 44/68 (64%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           S +EW+  L+ EQF + RQKGTE   TGEY      G YNC  C TPL+ S +KFNSG G
Sbjct: 78  SEEEWRAILSPEQFRILRQKGTEFPGTGEYDKFYEEGVYNCAGCGTPLYRSITKFNSGCG 137

Query: 137 WPSYDQPI 144
           WP++ + I
Sbjct: 138 WPAFYEGI 145