Miyakogusa Predicted Gene

Lj3g3v0339010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0339010.1 Non Chatacterized Hit- tr|D5A923|D5A923_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,34.67,3e-18,seg,NULL,CUFF.40547.1
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g42200.1                                                       174   3e-44

>Glyma13g42200.1 
          Length = 161

 Score =  174 bits (442), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 88/161 (54%), Positives = 110/161 (68%), Gaps = 6/161 (3%)

Query: 1   MGLGASKRVNNSLRNSSQFNSACDSAFTHCLSLTQHAYDGVLPYQLKTASDHIHTLLLSD 60
           MGL ASKRV  SL NS  F+SACDSAF+HCL+LTQHA++GV PYQLKTASD+IH      
Sbjct: 1   MGLSASKRVEKSLSNSGDFDSACDSAFSHCLALTQHAFEGVFPYQLKTASDYIHA----- 55

Query: 61  TNPHPLIHKWVATPPDRSQVDSALRRV-NHRGETLGSAPFKDWAHELYTDAVVAGAGKAL 119
              HPLI  W+ TPPDR+Q+D+ALRR+  +  +TL    FK+WAH LYTDAVV+ A K+L
Sbjct: 56  NTTHPLIRNWLPTPPDRTQIDAALRRLPPNSDDTLPLPLFKNWAHHLYTDAVVSAAAKSL 115

Query: 120 MLRXXXXXXXXXXXXXLARPAPVVIGSFVGAYSLGVGISIF 160
            +R             L RP   ++G+F+GAYSL V +SI 
Sbjct: 116 KVRVPVGIAGIVGVSALTRPPLRMVGTFIGAYSLAVALSIL 156