Miyakogusa Predicted Gene

Lj3g3v0336700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0336700.1 tr|G7IS24|G7IS24_MEDTR Threonine synthase
OS=Medicago truncatula GN=MTR_2g099510 PE=4 SV=1,84.14,0,thrC:
threonine synthase,Threonine synthase-like; PALP,Tryptophan synthase
beta subunit-like PLP-dep,CUFF.40632.1
         (527 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g42270.1                                                       863   0.0  
Glyma15g03120.1                                                       846   0.0  
Glyma17g05980.1                                                       791   0.0  
Glyma11g26030.1                                                       104   3e-22
Glyma09g12470.1                                                        60   6e-09

>Glyma13g42270.1 
          Length = 511

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/463 (89%), Positives = 437/463 (94%), Gaps = 3/463 (0%)

Query: 62  IRDEARRKKISTGDRHLFSAKYVPFNADPSS--TESYSLDEVVYRSQSGGLLDVQHDIAA 119
           IRDEARR   +  D HLFSAKYVPFNADPSS  TESYSLDE+VYRSQSGGLLDVQHD+ A
Sbjct: 48  IRDEARRIN-APHDHHLFSAKYVPFNADPSSSTTESYSLDEIVYRSQSGGLLDVQHDMDA 106

Query: 120 LKAFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERF 179
           LK FDGE+WRNLFDSRVGKTTWPYGSGVWSKKEWVLPEI DDDIVSAFEGNSNLFWAERF
Sbjct: 107 LKRFDGEYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIHDDDIVSAFEGNSNLFWAERF 166

Query: 180 GKRFVDMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAAL 239
           GK+F+ MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPV+GVGCASTGDTSAAL
Sbjct: 167 GKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAAL 226

Query: 240 SAYCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYL 299
           SAYCASA IPSIVFLPAN+IS+AQLVQPIANGAFVLSIDTDFDGCM LIREVTAELPIYL
Sbjct: 227 SAYCASAAIPSIVFLPANKISLAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYL 286

Query: 300 ANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKI 359
           ANSLNSLRLEGQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF+MC+ELGLVDKI
Sbjct: 287 ANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDKI 346

Query: 360 PRLVCAQAANANPLYTYFKSGWKEFQPMTAKTTFASAIQIGDPVSIDRAVLALKNSNGIV 419
           PRLVCAQAANA+PLY YFKSGWKEF+P+ + TTFASAIQIGDPVSIDRAV ALK+ +GIV
Sbjct: 347 PRLVCAQAANADPLYLYFKSGWKEFKPVKSSTTFASAIQIGDPVSIDRAVHALKSCDGIV 406

Query: 420 EEATEEELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFT 479
           EEATEEELMDA AQADSTGMF CPHTGVAL ALFKLRNSG+IK TDRTVVVSTAHGLKFT
Sbjct: 407 EEATEEELMDATAQADSTGMFICPHTGVALTALFKLRNSGLIKATDRTVVVSTAHGLKFT 466

Query: 480 QSKIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSK 522
           QSKIDYHS  IKDMAC++ANPP+QVKADFGSVMDVLK YL+SK
Sbjct: 467 QSKIDYHSKDIKDMACRYANPPMQVKADFGSVMDVLKTYLQSK 509


>Glyma15g03120.1 
          Length = 519

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/465 (88%), Positives = 434/465 (93%), Gaps = 4/465 (0%)

Query: 62  IRDEARRKKISTGDRHLFSAKYVPFNADPSSTESYS---LDEVVYRSQSGGLLDVQHDIA 118
           IRDEARR   +  D HLFSAKYVPFNAD SS+ S     LDE+VYRSQSGGLLDVQHD+ 
Sbjct: 55  IRDEARRIN-APHDHHLFSAKYVPFNADSSSSSSTESYSLDEIVYRSQSGGLLDVQHDMD 113

Query: 119 ALKAFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAER 178
           ALK FDGE+WRNLFDSRVGKTTWPYGSGVWSKKEWVLPEI DDDIVSAFEGNSNLFWAER
Sbjct: 114 ALKRFDGEYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIHDDDIVSAFEGNSNLFWAER 173

Query: 179 FGKRFVDMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAA 238
           FGK+F+ MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPV+GVGCASTGDTSAA
Sbjct: 174 FGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAA 233

Query: 239 LSAYCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIY 298
           LSAYCASA IPSIVFLPAN+IS+AQLVQPIANGAFVLSIDTDFDGCM LIREVTAELPIY
Sbjct: 234 LSAYCASAAIPSIVFLPANKISLAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIY 293

Query: 299 LANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDK 358
           LANSLNSLRLEGQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF+MC+ELGLVDK
Sbjct: 294 LANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDK 353

Query: 359 IPRLVCAQAANANPLYTYFKSGWKEFQPMTAKTTFASAIQIGDPVSIDRAVLALKNSNGI 418
           IPRLVCAQAANA+PLY YFKSGWKEF+P+ + TTFASAIQIGDPVSIDRAV ALK+ +GI
Sbjct: 354 IPRLVCAQAANADPLYLYFKSGWKEFKPVKSSTTFASAIQIGDPVSIDRAVHALKSCDGI 413

Query: 419 VEEATEEELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKF 478
           VEEATEEELMDA AQADSTGMF CPHTGVAL ALFKLRNSGVIK TDRTVVVSTAHGLKF
Sbjct: 414 VEEATEEELMDATAQADSTGMFICPHTGVALTALFKLRNSGVIKATDRTVVVSTAHGLKF 473

Query: 479 TQSKIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKA 523
           TQSKIDYHS  IKDMAC++ANPP+QVKADFGSVMDVLK YL+SKA
Sbjct: 474 TQSKIDYHSKDIKDMACRYANPPMQVKADFGSVMDVLKTYLQSKA 518


>Glyma17g05980.1 
          Length = 533

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/463 (81%), Positives = 418/463 (90%), Gaps = 4/463 (0%)

Query: 62  IRDEARRKKISTGDRHLFSAKYVPFNADPSSTESYSLDEVVYRSQSGGLLDVQHDIAALK 121
           I+DEARR+  +  D   F+AKYVPFNA   S E+YSLDE+VYRS+SGGLLDVQHD+ AL 
Sbjct: 70  IKDEARRRPAAEND---FTAKYVPFNAGFDSPETYSLDEIVYRSRSGGLLDVQHDMEALG 126

Query: 122 AFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 181
            FDG +WR LFDSRVGKTTWPYGSGVWSKKEWVLPEID DDIVSAFEGNSNLFWAERFGK
Sbjct: 127 RFDGAYWRALFDSRVGKTTWPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGK 186

Query: 182 RFVDMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSA 241
           +FV MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPV+GVGCASTGDTSAALSA
Sbjct: 187 QFVGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSA 246

Query: 242 YCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLAN 301
           YCASAGIPSIVFLPAN+IS AQL+QP++NG+ VLSI+TDFDGCM LIRE+TAELPIYLAN
Sbjct: 247 YCASAGIPSIVFLPANKISTAQLIQPVSNGSLVLSINTDFDGCMKLIREITAELPIYLAN 306

Query: 302 SLNSLRLEGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPR 361
           SLNSLRLEGQKTAAIEILQQF+W+VPDWVI+PGGNLGNIYAFYKGF+MCKELGLV++IPR
Sbjct: 307 SLNSLRLEGQKTAAIEILQQFNWEVPDWVIVPGGNLGNIYAFYKGFKMCKELGLVERIPR 366

Query: 362 LVCAQAANANPLYTYFKSGWKEFQPMTAKTTFASAIQIGDPVSIDRAVLALKNSNGIVEE 421
           LVCAQAANANPLY ++K+G+K+F  + A+TTFASAIQIGDPVSIDRAV AL+N+ GIVEE
Sbjct: 367 LVCAQAANANPLYLHYKNGFKDFNAVKAETTFASAIQIGDPVSIDRAVHALRNTEGIVEE 426

Query: 422 ATEEELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQS 481
           ATEEELMDAM QADSTGMF CPHTGVALAAL KLRN GVI   +R VVVSTAHGLKF QS
Sbjct: 427 ATEEELMDAMVQADSTGMFICPHTGVALAALIKLRNRGVIGAGERVVVVSTAHGLKFAQS 486

Query: 482 KIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKSKAP 524
           KIDYHSG I  M  ++ANP + VKADFGSVMDVLK +L +K+P
Sbjct: 487 KIDYHSGLIPGMG-RYANPLVSVKADFGSVMDVLKDFLHNKSP 528


>Glyma11g26030.1 
          Length = 77

 Score =  104 bits (259), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/84 (61%), Positives = 58/84 (69%), Gaps = 9/84 (10%)

Query: 98  LDEVVYRSQSGGLLDVQHDIAALKAFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPE 157
           LDE+VYRS S  LL+VQHD+  L +FD           +GK TW YGS VW+KK WVLPE
Sbjct: 1   LDEIVYRSHSDWLLNVQHDMEVLGSFD---------LHMGKMTWMYGSNVWNKKVWVLPE 51

Query: 158 IDDDDIVSAFEGNSNLFWAERFGK 181
           ID D IVS FEGNSNLFWAE F K
Sbjct: 52  IDLDYIVSTFEGNSNLFWAELFEK 75


>Glyma09g12470.1 
          Length = 52

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 3/52 (5%)

Query: 66  ARRKKISTGDRHLFSAKYVPFNADPSSTESYSLDEVVYRSQSGGLLDVQHDI 117
           AR   ++  D   F+ KY+PFN   +S E+YSLD++VYRS+S GLLD+QHD+
Sbjct: 1   ARHHHMAEND---FTVKYIPFNTGFNSLETYSLDKIVYRSRSSGLLDMQHDM 49