Miyakogusa Predicted Gene
- Lj3g3v0323310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0323310.1 Non Chatacterized Hit- tr|K4BMX8|K4BMX8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.1,2e-18,seg,NULL,CUFF.40509.1
(139 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g02920.1 138 2e-33
Glyma13g42460.1 115 1e-26
Glyma07g01010.1 110 4e-25
Glyma08g20380.1 100 6e-22
Glyma09g07480.1 67 6e-12
Glyma17g16860.1 59 1e-09
Glyma18g01930.1 59 2e-09
Glyma01g40470.1 58 3e-09
Glyma05g23200.1 58 4e-09
Glyma08g14260.1 57 6e-09
Glyma05g31050.1 57 9e-09
Glyma06g09380.1 56 1e-08
Glyma04g09250.1 55 2e-08
Glyma11g38030.1 54 4e-08
Glyma14g38350.1 50 8e-07
Glyma02g40140.1 48 3e-06
Glyma10g27080.1 48 4e-06
>Glyma15g02920.1
Length = 130
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 92/140 (65%), Gaps = 24/140 (17%)
Query: 8 CFMVALQIMSC---CVSVTSRPFSPTDDLSHPAGPKQVPAPE--SSPPYTIESEKGLMVR 62
CFM+AL I+S V V RPF PTD +SHP GPK P P SSP T+E EKGLM
Sbjct: 7 CFMLALLIVSWESVVVVVARRPFPPTDGMSHP-GPKAAPGPGPVSSPSNTVEPEKGLM-- 63
Query: 63 EKMTERMKEEAYYDR---RIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQ 119
EEAYY R +IGSSPPSCEHKCYGCTPCEAIQVPST LG+Q
Sbjct: 64 --------EEAYYYRGVSKIGSSPPSCEHKCYGCTPCEAIQVPST-----SSRRSHLGLQ 110
Query: 120 YANYEPESWKCKCGPSFYSP 139
Y NYEPESWKCKCGPS YSP
Sbjct: 111 YTNYEPESWKCKCGPSLYSP 130
>Glyma13g42460.1
Length = 95
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 74/111 (66%), Gaps = 20/111 (18%)
Query: 33 LSHPAGPKQVPAPE--SSPPYTIESEKGLMVREKMTERMKEEAYYDR--RIGSSPPSCEH 88
+ HP GPK P P SSP T+ESEKGLM EEAY R +IGSSPPSCEH
Sbjct: 1 MCHP-GPKAAPGPGPVSSPSNTVESEKGLM----------EEAYSYRVSKIGSSPPSCEH 49
Query: 89 KCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQYANYEPESWKCKCGPSFYSP 139
KCYGCTPCEAIQVPST LG+QY NYEPESWKCKCGPS YSP
Sbjct: 50 KCYGCTPCEAIQVPST-----SSWRSHLGLQYTNYEPESWKCKCGPSLYSP 95
>Glyma07g01010.1
Length = 99
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 76/138 (55%), Gaps = 43/138 (31%)
Query: 4 GRLFCFMVALQIMSCCVSVTSRPFSPTDDLSHPAGPKQVPAPESSPPYTIESEKGLMVRE 63
GRLFCF++ALQI+S VS +PF P
Sbjct: 3 GRLFCFLLALQIVSL-VSAVRKPFLPGT-------------------------------- 29
Query: 64 KMTERMKEEAYYD--RRIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQYA 121
+E MKE AY +IGSSPPSCEHKCYGC PCEAIQVPST LGIQYA
Sbjct: 30 --SETMKE-AYEGGVSKIGSSPPSCEHKCYGCVPCEAIQVPST-----STRRSHLGIQYA 81
Query: 122 NYEPESWKCKCGPSFYSP 139
NYEPESWKCKCG SFYSP
Sbjct: 82 NYEPESWKCKCGLSFYSP 99
>Glyma08g20380.1
Length = 75
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 57/80 (71%), Gaps = 10/80 (12%)
Query: 63 EKMTERMKEEAYYD---RRIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQ 119
E +E MKE YD +IGSSPPSCEHKCYGC PCEAIQVPST LGIQ
Sbjct: 3 EGTSETMKEA--YDGGVSKIGSSPPSCEHKCYGCVPCEAIQVPST-----STRRSHLGIQ 55
Query: 120 YANYEPESWKCKCGPSFYSP 139
YANYEPESWKCKCG SFYSP
Sbjct: 56 YANYEPESWKCKCGLSFYSP 75
>Glyma09g07480.1
Length = 62
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 35/54 (64%), Gaps = 8/54 (14%)
Query: 78 RIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQYANYEPESWKCK 131
R+GS+PP CEHKC GC PC IQ+P+ LG QYANYEPE WKCK
Sbjct: 16 RLGSTPPRCEHKCGGCIPCNPIQIPTN--------NDLLGAQYANYEPEGWKCK 61
>Glyma17g16860.1
Length = 129
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Query: 56 EKGLMVREKMTERM---KEEAYYDR-----RIGSSPPSCEHKCYGCTPCEAIQVPST--X 105
+KGL++ + T ++ ++ D+ RIGS PP CE +C C CEAIQVP+
Sbjct: 30 QKGLVIEGRKTPKLSNFRQTVSEDKTMLRPRIGSRPPMCERRCRSCEHCEAIQVPTNPQM 89
Query: 106 XXXXXXXXXXLGIQYA------NYEPESWKCKCGPSFYSP 139
I YA NY+P SWKCKCG ++P
Sbjct: 90 QNRKKNSSKFSSIAYARVGGSSNYKPMSWKCKCGNLIFNP 129
>Glyma18g01930.1
Length = 127
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 77 RRIGSSPPSCEHKCYGCTPCEAIQVPST----------XXXXXXXXXXXLGIQYANYEPE 126
R+GS PP+C +KC C PC A+QVP++ G +Y+NY+P
Sbjct: 55 NRLGSMPPTCHNKCNRCHPCMAVQVPASPSHERVHPGLAPTAAMEVFFLQGNRYSNYKPL 114
Query: 127 SWKCKCGPSFYSP 139
SWKC CG F++P
Sbjct: 115 SWKCHCGDHFFNP 127
>Glyma01g40470.1
Length = 81
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 71 EEAYYDRRIGSSPPSCEHKCYGCTPCEAIQVPST--------XXXXXXXXXXXLGIQYAN 122
++A +IGS PP CE +C C CEAIQVP+ +G +N
Sbjct: 5 DKAMVRAQIGSRPPKCERRCRSCGHCEAIQVPTNPQAQNGKINSSTVSTIAFTMGEGGSN 64
Query: 123 YEPESWKCKCGPSFYSP 139
Y+P SWKCKCG ++P
Sbjct: 65 YKPMSWKCKCGNRIFNP 81
>Glyma05g23200.1
Length = 81
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 78 RIGSSPPSCEHKCYGCTPCEAIQVPST--XXXXXXXXXXXLGIQYA------NYEPESWK 129
RIGS PP CE +C C CEAIQVP+ I YA NY+P SWK
Sbjct: 12 RIGSRPPKCERRCRSCEHCEAIQVPTNPQAQNRKKNSSKFSSIAYARVGGSSNYKPMSWK 71
Query: 130 CKCGPSFYSP 139
CKCG ++P
Sbjct: 72 CKCGNLIFNP 81
>Glyma08g14260.1
Length = 127
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 77 RRIGSSPPSCEHKCYGCTPCEAIQVP--------------STXXXXXXXXXXXLGIQYAN 122
R+GS PPSC +KC C PC A+QVP + G +Y+N
Sbjct: 51 NRLGSIPPSCHNKCNDCHPCMAVQVPTLPSHDSNPPDLTKTAAMATFLNPSSPQGNRYSN 110
Query: 123 YEPESWKCKCGPSFYSP 139
Y+P WKC CG F++P
Sbjct: 111 YKPLGWKCHCGDHFFNP 127
>Glyma05g31050.1
Length = 127
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 77 RRIGSSPPSCEHKCYGCTPCEAIQVP--------------STXXXXXXXXXXXLGIQYAN 122
R+GS PPSC +KC C PC A+QVP + G +Y+N
Sbjct: 51 NRLGSIPPSCHNKCNDCHPCMAVQVPTLLSHDSNPPDLTKTAAMASFLNPSSPQGNRYSN 110
Query: 123 YEPESWKCKCGPSFYSP 139
Y+P WKC CG F++P
Sbjct: 111 YKPLGWKCHCGDHFFNP 127
>Glyma06g09380.1
Length = 129
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 78 RIGSSPPSCEHKCYGCTPCEAIQVP--------------STXXXXXXXXXXXLGIQYANY 123
RIGS PP CE +C C CEA+QVP S+ G +NY
Sbjct: 54 RIGSRPPKCEKRCSSCGHCEAVQVPVVPQIFQTHRRRHYSSERATKAVTYSSRGDDLSNY 113
Query: 124 EPESWKCKCGPSFYSP 139
+P SWKCKCG ++P
Sbjct: 114 KPMSWKCKCGDYLFNP 129
>Glyma04g09250.1
Length = 96
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 78 RIGSSPPSCEHKCYGCTPCEAIQVP------------STXXXXXXXXXXXLGIQYANYEP 125
RIGS PP CE +C C CEA+QVP S+ +NY+P
Sbjct: 23 RIGSRPPKCEKRCNTCGHCEAVQVPVAPQIQTHRRHYSSARATKAVTYSSRDDHLSNYKP 82
Query: 126 ESWKCKCGPSFYSP 139
SWKCKCG ++P
Sbjct: 83 MSWKCKCGDYLFNP 96
>Glyma11g38030.1
Length = 130
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Query: 76 DRRIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXX--------XXXXXXLGIQ-----YAN 122
R+GS PP+C +KC C PC A+QVP++ +Q Y+N
Sbjct: 54 QNRLGSMPPTCHNKCNQCHPCMAVQVPTSPNHERVHPGLLPPTASMEVFFLQGNTNRYSN 113
Query: 123 YEPESWKCKCGPSFYSP 139
Y+P SWKC CG F++P
Sbjct: 114 YKPLSWKCHCGDHFFNP 130
>Glyma14g38350.1
Length = 157
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 14/69 (20%)
Query: 75 YDRRI----GSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQYANYEPESWKC 130
+DRR+ GSSPP C KC CTPC + VP A Y PE+W+C
Sbjct: 99 WDRRLLGGPGSSPPRCTSKCGRCTPCRPVHVPVPPGMRVT----------AEYYPEAWRC 148
Query: 131 KCGPSFYSP 139
KCG Y P
Sbjct: 149 KCGNKLYMP 157
>Glyma02g40140.1
Length = 142
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 54 ESEKGLMVREKMTERMKEEAYYDRRIG---SSPPSCEHKCYGCTPCEAIQVPSTXXXXXX 110
++ +GL+ KM + ++ R +G SSPP C KC CTPC + VP
Sbjct: 66 KNGQGLVFGGKM--EVSSMGWHRRLLGGPGSSPPRCTSKCGRCTPCRPVHVPVPPGTPVT 123
Query: 111 XXXXXLGIQYANYEPESWKCKCGPSFYSP 139
A Y PE+W+CKCG Y P
Sbjct: 124 ----------AEYYPEAWRCKCGNKLYMP 142
>Glyma10g27080.1
Length = 126
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 54 ESEKGLMVREKMTERMKEEAYYDRRIG---SSPPSCEHKCYGCTPCEAIQVPSTXXXXXX 110
++ +GL+ KM + ++ R +G S PP C KC CTPC + VP
Sbjct: 50 KNGQGLVFGGKM--EVSSMGWHKRLLGGPGSLPPWCTSKCGKCTPCRPVHVPVLLGT--- 104
Query: 111 XXXXXLGIQYANYEPESWKCKCGPSFYSP 139
+ A Y PE+W+CKCG Y P
Sbjct: 105 -------LVTAEYYPEAWRCKCGNKLYMP 126