Miyakogusa Predicted Gene
- Lj3g3v0323280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0323280.1 Non Chatacterized Hit- tr|G7IUG9|G7IUG9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,83.63,0,3-HYDROXYISOBUTYRATE DEHYDROGENASE,NULL;
3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED,Hydroxy
monocarb,CUFF.40510.1
(342 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g42500.1 493 e-139
Glyma07g06570.1 329 3e-90
Glyma16g03160.1 326 3e-89
Glyma08g03740.1 148 8e-36
Glyma05g35880.1 142 6e-34
Glyma09g02900.2 124 1e-28
Glyma09g02900.1 123 3e-28
Glyma05g30310.1 118 8e-27
Glyma07g11610.1 89 8e-18
Glyma15g13860.1 55 2e-07
>Glyma13g42500.1
Length = 276
Score = 493 bits (1268), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/297 (83%), Positives = 262/297 (88%), Gaps = 22/297 (7%)
Query: 46 EAPARVGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISLGAKYKSSPEEVAASC 105
E PAR+GFLG+GIMGSPMA NLLKAG YK SPEEVAASC
Sbjct: 2 EPPARIGFLGLGIMGSPMAHNLLKAG----------------------YKPSPEEVAASC 39
Query: 106 DVTFSMLADPQSAMDVACGKHGAANGMGPGKGYVDVSTVDGDTSKLISEHIKSTGALFLE 165
DVTF+MLADPQSA+DVACGKHGAANGMGPGKGYVDVSTVDGDTSKLI+ H+KSTGALFLE
Sbjct: 40 DVTFAMLADPQSAVDVACGKHGAANGMGPGKGYVDVSTVDGDTSKLINGHMKSTGALFLE 99
Query: 166 APVSGSKKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSKFFLGDVGNGAAMKLVVNMIM 225
APVSGSKKPAEDG LIFLTAGD+NLYE V LDIMGKSKF+LGDVGNGAAMKLVVNMIM
Sbjct: 100 APVSGSKKPAEDGQLIFLTAGDKNLYEAVGSLLDIMGKSKFYLGDVGNGAAMKLVVNMIM 159
Query: 226 GSMMASFSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSMKGPSMIQSLYPTAFPLKHQQ 285
GSMMASFSEGLLLSEKVGLDP VLV+V+SQGAISAPMYS KGPSMIQSLYPTAFPLKHQQ
Sbjct: 160 GSMMASFSEGLLLSEKVGLDPDVLVQVVSQGAISAPMYSTKGPSMIQSLYPTAFPLKHQQ 219
Query: 286 KDLRLALGLAESVSQPIPIAAAANELYKVAKSHGLSDQDFSAVIEALKSKFQHSENQ 342
KDLRLALGLAESVSQP PIA+AANELYKVAKS+GLSDQDFSAVIEALKSKFQHSE +
Sbjct: 220 KDLRLALGLAESVSQPTPIASAANELYKVAKSNGLSDQDFSAVIEALKSKFQHSETK 276
>Glyma07g06570.1
Length = 290
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/283 (58%), Positives = 204/283 (72%), Gaps = 1/283 (0%)
Query: 52 GFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISLGAKYKSSPEEVAASCDVTFSM 111
GFLG+GIMG MA NLL+ G +T+WNRT SKCD L+ GA +P V C T +M
Sbjct: 4 GFLGLGIMGKAMAINLLRHGFKVTIWNRTLSKCDELVQHGASVGETPATVVKKCKYTIAM 63
Query: 112 LADPQSAMDVACGKHGAANGMGPGKGYVDVSTVDGDTSKLISEHIKSTGALFLEAPVSGS 171
L+DP +A+ V K G + GK Y+D+STVD DTS ISE IK+ G FLEAPVSGS
Sbjct: 64 LSDPSAALSVVFDKDGVLEHIN-GKCYIDMSTVDADTSSKISETIKAKGGYFLEAPVSGS 122
Query: 172 KKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSKFFLGDVGNGAAMKLVVNMIMGSMMAS 231
KKPAEDG LI L AGD+ LY+ V P D++GK FFLG+VGNGA MKLVVNMIMGSMM +
Sbjct: 123 KKPAEDGQLIILAAGDKALYDEVLPAFDVLGKKSFFLGEVGNGAKMKLVVNMIMGSMMNA 182
Query: 232 FSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSMKGPSMIQSLYPTAFPLKHQQKDLRLA 291
FSEGL L+E+ GL+P L++V+ GAIS M+ +KGP+M+Q+ Y AFPLKHQQKD+RLA
Sbjct: 183 FSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDMRLA 242
Query: 292 LGLAESVSQPIPIAAAANELYKVAKSHGLSDQDFSAVIEALKS 334
L L + + +P+AAAANE +K A+S GL D DFSAV E LK+
Sbjct: 243 LALGDENAVSMPVAAAANEAFKKARSMGLGDLDFSAVHETLKA 285
>Glyma16g03160.1
Length = 290
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/285 (57%), Positives = 203/285 (71%), Gaps = 1/285 (0%)
Query: 50 RVGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISLGAKYKSSPEEVAASCDVTF 109
VGFLG+GIMG MA NLL+ G +TVWNRT SKCD L+ GA +P V C T
Sbjct: 2 EVGFLGLGIMGKAMAINLLRHGFKVTVWNRTLSKCDELVQHGASVGETPATVVKKCKYTI 61
Query: 110 SMLADPQSAMDVACGKHGAANGMGPGKGYVDVSTVDGDTSKLISEHIKSTGALFLEAPVS 169
+ML+DP +A+ V G + GKGY+D+STV+ DTS ISE IK+ G FLE PVS
Sbjct: 62 AMLSDPSAALSVVFDNDGVLEHIN-GKGYIDMSTVNADTSSKISEAIKAKGGYFLEGPVS 120
Query: 170 GSKKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSKFFLGDVGNGAAMKLVVNMIMGSMM 229
GSKKPAEDG LI L AG + LY+ V P DI+GK FFLG+VGNGA MKLVVNMIMGSMM
Sbjct: 121 GSKKPAEDGQLIILAAGHKALYDEVLPAFDILGKKSFFLGEVGNGAKMKLVVNMIMGSMM 180
Query: 230 ASFSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSMKGPSMIQSLYPTAFPLKHQQKDLR 289
+FSEG+ L+E+ GL+P L++V+ GAIS M+ +KGP+M+Q+ Y AFPLKHQQKD+R
Sbjct: 181 NAFSEGITLAERSGLNPGTLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDMR 240
Query: 290 LALGLAESVSQPIPIAAAANELYKVAKSHGLSDQDFSAVIEALKS 334
LAL L + + +P+AAAANE +K A+S GL D DFSAV E LK+
Sbjct: 241 LALALGDENAVSMPVAAAANEAFKKARSMGLGDLDFSAVHETLKA 285
>Glyma08g03740.1
Length = 336
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 161/327 (49%), Gaps = 17/327 (5%)
Query: 12 LHRLPHHHLFNHFRPFRFSMSAQLSNVSPQSQVIEAPARVGFLGIGIMGSPMAQNLLKAG 71
LHR H + HF M+A +S + RVG++G G+MG M +L++AG
Sbjct: 15 LHRRIHTSIVRHF------MAAAEPIISSSN------TRVGWIGTGVMGQSMCAHLIRAG 62
Query: 72 IDLTVWNRTKSKCDPLISLGAKYKSSPEEVAASCDVTFSMLADPQSAMDVACG-KHGAAN 130
LTV+NRT SK PL+ LGA + SP VAA+ DV F+++ P V GA +
Sbjct: 63 YTLTVFNRTPSKAQPLLDLGAHFAPSPHAVAANSDVVFTIVGYPSDVRSVLLHPSSGALS 122
Query: 131 GMGPGKGYVDVSTVDGDTSKLISEHIKSTGALFLEAPVSGSKKPAEDGTLIFLTAGDRNL 190
+ PG VD++T + + I+ + G ++APVSG + A++GTL G+
Sbjct: 123 ALRPGGVLVDMTTSEPSLATEIAAAAAAKGCHSIDAPVSGGDRGAKNGTLAIFAGGEEAT 182
Query: 191 YETVAPHLDIMGKSKFFLGDVGNGAAMKLVVNMIMGSMMASFSEGLLLSEKVGLDPKVLV 250
+ + P +GK K ++G G G KL + + S M EG++ + K GLD + +
Sbjct: 183 VKRLEPLFSHLGKVK-YMGGSGKGQFAKLANQVTIASTMVGLVEGMVYAHKAGLDVGLYL 241
Query: 251 EVISQGAISAPMYSMKGPSMIQSLYPTAFPLKHQQKDLRLALGLAESVSQPIPIAAAANE 310
+ IS GA + + G ++ F + H KDL + L +++ +P A A +
Sbjct: 242 DAISTGAAGSKSLDLYGKRILNRDLDPGFFVNHFVKDLGICLKECQNMGIALPGLALAQQ 301
Query: 311 LYKVAKSHG---LSDQDFSAVIEALKS 334
LY ++HG L Q V+E L +
Sbjct: 302 LYVSLRAHGEGNLGTQALILVLERLNN 328
>Glyma05g35880.1
Length = 310
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 154/308 (50%), Gaps = 11/308 (3%)
Query: 31 MSAQLSNVSPQSQVIEAPARVGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISL 90
M+A +SP + RVG++G G+MG M +L++AG LTV+NRT SK PL+ L
Sbjct: 1 MAAAEPTISPSNT------RVGWIGTGVMGQSMCAHLIRAGYTLTVFNRTPSKAQPLLDL 54
Query: 91 GAKYKSSPEEVAASCDVTFSMLADPQSAMDVACG-KHGAANGMGPGKGYVDVSTVDGDTS 149
GA + SP VAA DV FS++ P V GA + + PG VD++T + +
Sbjct: 55 GAYFAPSPHAVAARSDVVFSIVGYPSDVRSVLLHPSSGALSALRPGGVLVDMTTSEPSLA 114
Query: 150 KLISEHIKSTGALFLEAPVSGSKKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSKFFLG 209
I++ + G ++APVSG + A++GTL G+ + + + +GK ++G
Sbjct: 115 VEIADAATAKGCHSIDAPVSGGDRGAKNGTLAIFAGGEESTVKRMEALFSHLGKVN-YMG 173
Query: 210 DVGNGAAMKLVVNMIMGSMMASFSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSMKGPS 269
G G KL + + S M EG++ + K GLD + ++ IS GA + + G
Sbjct: 174 GSGKGQFAKLANQVTIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLDLYGKR 233
Query: 270 MIQSLYPTAFPLKHQQKDLRLALGLAESVSQPIPIAAAANELYKVAKSHG---LSDQDFS 326
++ F + H KDL + L +++ +P A A +LY ++HG L Q
Sbjct: 234 ILNRDLEPGFFVNHFVKDLGICLKECQNMGIALPGLALAQQLYVSLRAHGEGNLGTQALI 293
Query: 327 AVIEALKS 334
V+E L +
Sbjct: 294 LVLERLNN 301
>Glyma09g02900.2
Length = 343
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 147/326 (45%), Gaps = 23/326 (7%)
Query: 38 VSPQSQVIEAPARVGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISLGAKYKSS 97
VS + + VGF+G+G MGS MA NL+KAG LTV + + +G K +
Sbjct: 20 VSSSIRAFSSAQNVGFIGLGNMGSRMANNLIKAGFRLTVHDLNSDVLEMFSQMGVPTKKT 79
Query: 98 PEEVAASCDVTFSMLADPQSAMDVACGKHGAANGMGPGKGYV--DVSTVDGDTSKLISEH 155
P EV+ + DV +ML +DV G +G +G + ++ D ST+D TS+ +S
Sbjct: 80 PYEVSEASDVVITMLPTSAHVIDVYTGPNGLLHGGKLLRPWLLLDSSTIDPQTSRNLSAT 139
Query: 156 IKS----------TGALFLEAPVSGSKKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSK 205
+ + L+APVSGS AE GTL F+ G + P L MGKS
Sbjct: 140 VTNYILREKKGEWEKPFKLDAPVSGSVTAAEAGTLTFMVGGSEEAFLAAKPLLFSMGKSA 199
Query: 206 FFLGDVGNGAAMKLVVNMIMGSMMASFSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSM 265
+ G G+G+A K+ N+ + M SE L L + +G+ L + + SA +S
Sbjct: 200 IYCGGAGSGSAAKICNNLALAVSMLGISEALALGQSLGVSASTLTNIFN--CSSARCWSS 257
Query: 266 KG----PSMIQSL-----YPTAFPLKHQQKDLRLALGLAESVSQPIPIAAAANELYKVAK 316
P +++ + Y F K KDL LA+ A+ P+ + A ++Y
Sbjct: 258 DAYNPVPGLMEGVPSSGDYNGGFASKLMAKDLNLAVESAKLAGCKYPLTSQAQKIYTELC 317
Query: 317 SHGLSDQDFSAVIEALKSKFQHSENQ 342
S G +DFS S +Q
Sbjct: 318 SVGHEAKDFSCAFRHYYSGIDEPHDQ 343
>Glyma09g02900.1
Length = 350
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 143/314 (45%), Gaps = 23/314 (7%)
Query: 50 RVGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISLGAKYKSSPEEVAASCDVTF 109
VGF+G+G MGS MA NL+KAG LTV + + +G K +P EV+ + DV
Sbjct: 39 NVGFIGLGNMGSRMANNLIKAGFRLTVHDLNSDVLEMFSQMGVPTKKTPYEVSEASDVVI 98
Query: 110 SMLADPQSAMDVACGKHGAANGMGPGKGYV--DVSTVDGDTSKLISEHIKS--------- 158
+ML +DV G +G +G + ++ D ST+D TS+ +S + +
Sbjct: 99 TMLPTSAHVIDVYTGPNGLLHGGKLLRPWLLLDSSTIDPQTSRNLSATVTNYILREKKGE 158
Query: 159 -TGALFLEAPVSGSKKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSKFFLGDVGNGAAM 217
L+APVSGS AE GTL F+ G + P L MGKS + G G+G+A
Sbjct: 159 WEKPFKLDAPVSGSVTAAEAGTLTFMVGGSEEAFLAAKPLLFSMGKSAIYCGGAGSGSAA 218
Query: 218 KLVVNMIMGSMMASFSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSMKG----PSMIQS 273
K+ N+ + M SE L L + +G+ L + + SA +S P +++
Sbjct: 219 KICNNLALAVSMLGISEALALGQSLGVSASTLTNIFN--CSSARCWSSDAYNPVPGLMEG 276
Query: 274 L-----YPTAFPLKHQQKDLRLALGLAESVSQPIPIAAAANELYKVAKSHGLSDQDFSAV 328
+ Y F K KDL LA+ A+ P+ + A ++Y S G +DFS
Sbjct: 277 VPSSGDYNGGFASKLMAKDLNLAVESAKLAGCKYPLTSQAQKIYTELCSVGHEAKDFSCA 336
Query: 329 IEALKSKFQHSENQ 342
S +Q
Sbjct: 337 FRHYYSGIDEPHDQ 350
>Glyma05g30310.1
Length = 309
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 147/294 (50%), Gaps = 13/294 (4%)
Query: 50 RVGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLI--SLGAKYKSSPEEVAASCDV 107
R+G++GIG+MG MA LL AG L+ + R S + L S GA SP ++A DV
Sbjct: 15 RIGWIGIGVMGFAMASRLLSAGYTLSFYARNPSNPNALSLQSQGATLAQSPAQLAQLSDV 74
Query: 108 TFSMLADPQSAMDVACGKHGAANGMGPGKGYVDVSTVDGDTSKLISEHIKSTGALFLEAP 167
F+M+ P + + + P VD ++ D ++ I +S A ++AP
Sbjct: 75 LFTMVGHPSDVRSLLLDSP-VLSSLRPNSVVVDTTSSHPDLARQIFSAARSLDAWSVDAP 133
Query: 168 VSGSKKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSKFFLGDVGNGAAMKLVVNMIMGS 227
VSG A DG L L AG++ + E ++P I+G++ + +G G G + K+ + +G+
Sbjct: 134 VSGGDIGARDGKLAILAAGEKAVVEWLSPLFSILGRATY-MGPAGCGQSCKIANQITIGA 192
Query: 228 MMASFSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSMKGPSMIQSLY-PTAFPLKHQQK 286
+ SEGL+ +++ GLD + VE I GA + + G MI+ + P F ++Q K
Sbjct: 193 NLIGLSEGLVFAKRAGLDLREFVEAIKDGAAGSKALELFGERMIERDFRPGGFA-EYQVK 251
Query: 287 DLRLALGLAESVSQP----IPIAAAANELYKVAKSHG---LSDQDFSAVIEALK 333
DL + + + E +P A+ + +L+ ++G L Q +VIE +
Sbjct: 252 DLGMGVDVVEGGDDAHLVVLPGASLSKQLFSSMLANGQGKLGSQGIISVIERIN 305
>Glyma07g11610.1
Length = 1214
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 136/284 (47%), Gaps = 3/284 (1%)
Query: 50 RVGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISLGAKYKSSPEEVAASCDVTF 109
RVGF+G+G MG MA +LL + + ++ K + G +SP EV+ DV
Sbjct: 171 RVGFIGLGAMGFGMATHLLSSKFCVVGFDVYKPTLTRFSNAGGLIGNSPAEVSKDADVLI 230
Query: 110 SMLADPQSAMDVACGKHGAANGMGPGKGYVDVSTVDGDTSKLISEHIKSTGA--LFLEAP 167
M+ + A V G++GA + + PG + STV + + + G ++AP
Sbjct: 231 IMVTNEAQAESVLYGEYGAVSALPPGATIILSSTVSPAYVSQLEHRLHNEGKNLKLVDAP 290
Query: 168 VSGSKKPAEDGTLIFLTAGDRNLYETVAPHLDIMGKSKFFL-GDVGNGAAMKLVVNMIMG 226
VSG A GTL + +G + ++ L + + + + G G G+ +K++ ++ G
Sbjct: 291 VSGGVVRASMGTLTIMASGTDDALKSAGLVLAALSEKLYIIKGGCGAGSGVKMINQLLAG 350
Query: 227 SMMASFSEGLLLSEKVGLDPKVLVEVISQGAISAPMYSMKGPSMIQSLYPTAFPLKHQQK 286
+AS +E + + ++GL+ ++L + I+ ++ M+ +G MI + Y L K
Sbjct: 351 VQIASAAEAIAFAARLGLNTRLLFDFIATSGGTSWMFENRGQHMIDNDYTPCSALDIFVK 410
Query: 287 DLRLALGLAESVSQPIPIAAAANELYKVAKSHGLSDQDFSAVIE 330
DL + + S P+ ++ A++LY + G D + V++
Sbjct: 411 DLGIVTRESSSWKVPLQLSTIAHQLYLAGSAAGWGRIDDAGVVK 454
>Glyma15g13860.1
Length = 224
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 46 EAPAR----VGFLGIGIMGSPMAQNLLKAGIDLTVWNRTKSKCDPLISLGAKYKSSPEEV 101
E P R VGF+G+G MGS MA NL+KAG LTV + + +G K +P EV
Sbjct: 35 EVPPRHLQNVGFIGLGNMGSRMANNLIKAGFRLTVHDLNSDVLEMFSQMGVPTKKTPYEV 94
Query: 102 AASCDVTFSMLADPQSA 118
+ + DV +ML P SA
Sbjct: 95 SEASDVVITML--PNSA 109