Miyakogusa Predicted Gene
- Lj3g3v0311080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0311080.1 Non Chatacterized Hit- tr|B9S0S2|B9S0S2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.51,5e-19,LEA_2,Late embryogenesis abundant protein, LEA-14;
seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NA,CUFF.40505.1
(256 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g02810.1 260 1e-69
Glyma13g42590.1 247 7e-66
Glyma07g01200.1 191 8e-49
Glyma06g05490.1 140 2e-33
Glyma04g05460.1 138 5e-33
Glyma09g22340.1 94 1e-19
Glyma10g26590.1 72 7e-13
Glyma11g31840.1 65 8e-11
Glyma14g38890.1 63 4e-10
Glyma02g40580.1 63 4e-10
Glyma18g05450.1 62 8e-10
Glyma14g04580.1 60 2e-09
Glyma02g44200.1 59 4e-09
Glyma10g31730.1 57 2e-08
Glyma20g35880.1 56 3e-08
>Glyma15g02810.1
Length = 254
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 157/257 (61%), Gaps = 5/257 (1%)
Query: 1 MTDRVYPSXXXXXXXXXXXXXXXXXXXXXXQLYGANRPAYRPQPLHXXXXXXXXXXXXX- 59
MTDRVYPS QLYGA RP YRPQP H
Sbjct: 1 MTDRVYPSAKPAVVNGGAANPSFPATKA--QLYGATRPTYRPQPHHRRRSRRRCCCTFFF 58
Query: 60 WXXXXXXXXXXXXGGAGVAFYLLYRPHHPTFSVXXXXXX-XXXXXXXXXXXXKFDLTVAA 118
W G AG FYLLYRPHHPTF+V +FD+TV+A
Sbjct: 59 WLILTVLILLLLIGVAGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNTLNSRFDITVSA 118
Query: 119 TNPNKKNIAFSYLPTSITILSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXX 178
TNPNKK I F+Y PTSITILSGD+DVGDGT+P F H KKNTTL+K+SI SSGH
Sbjct: 119 TNPNKK-ILFAYDPTSITILSGDIDVGDGTVPGFQHPKKNTTLIKASILSSGHALQSDEA 177
Query: 179 XXXXXXXXXXNGLPLKVKLDTKVKATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTS 238
NGLPLKV L+TKVKA MG LKTP+VGIRVSCDGIRVTLP+GKKPATASTS
Sbjct: 178 SRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVTLPSGKKPATASTS 237
Query: 239 NAKCNVDVRFKIWKWTV 255
NAKC+VDVRFKIWKWT+
Sbjct: 238 NAKCDVDVRFKIWKWTI 254
>Glyma13g42590.1
Length = 254
Score = 247 bits (631), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 139/257 (54%), Positives = 153/257 (59%), Gaps = 5/257 (1%)
Query: 1 MTDRVYPSXXXXXXXXXXXXXXXXXXXXXXQLYGANRPAYRPQPLHXXXXXXXXXXXXX- 59
MTDRVYPS QLYGA RP YRPQP H
Sbjct: 1 MTDRVYPSAKPAAVNGAAANPSFPATKA--QLYGATRPTYRPQPHHRRRSKRRCCCTFFF 58
Query: 60 WXXXXXXXXXXXXGGAGVAFYLLYRPHHPTFSVXXXXXX-XXXXXXXXXXXXKFDLTVAA 118
W G G FYLLYRPHHPTF+V +FD+TV+A
Sbjct: 59 WLILTVLILLLLIGVGGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNTLNSRFDITVSA 118
Query: 119 TNPNKKNIAFSYLPTSITILSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXX 178
TNPNKK I F+Y PTSITILS D+D+GDGT+P F H KKNTTL+K SI SSG
Sbjct: 119 TNPNKK-ILFAYDPTSITILSADIDLGDGTVPGFQHPKKNTTLIKGSILSSGQALQSDEA 177
Query: 179 XXXXXXXXXXNGLPLKVKLDTKVKATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTS 238
NGLPLKV L+TKVKA MG LKTP+VGIRVSCDGIRV+LP+GKKPATASTS
Sbjct: 178 SRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVSLPSGKKPATASTS 237
Query: 239 NAKCNVDVRFKIWKWTV 255
NAKC+VDVRFKIWKWTV
Sbjct: 238 NAKCDVDVRFKIWKWTV 254
>Glyma07g01200.1
Length = 254
Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 134/259 (51%), Gaps = 8/259 (3%)
Query: 1 MTDRVYPSXXXXXXXXXXXXXXXXXXXXXXQLYGANRPAYRPQPLHXXXXXXX--XXXXX 58
MTDRV+PS QL GANRP YRPQP H
Sbjct: 1 MTDRVHPSAKTTANAGPKPTFPATKS----QLSGANRPTYRPQPQHHRRRRSRGCASTLC 56
Query: 59 XWXXXXXXXXXXXXGGAGVAFYLLYRPHHPTFSVXXXXXXXXXXXXXXXXXXKFDLTVAA 118
W G AG Y LYRP PTFSV KFDLT++
Sbjct: 57 CWLLLILLFLLLLVGAAGTVLYFLYRPQRPTFSVTSLKLSSFNLTTPSTINAKFDLTLST 116
Query: 119 TNPNKKNIAFSYLPTSITILSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXX 178
TNPN K I FSY PTS+++L GD V TIP+F H ++NTT+L++ ++S+
Sbjct: 117 TNPNDK-IIFSYDPTSVSLLYGDTAVASTTIPSFLHRQRNTTVLQAYVTSTEEVVDSDAA 175
Query: 179 XXXXXXXXXXNGL-PLKVKLDTKVKATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATAST 237
+ L LKV+L+TKV+A MG +TPRVGI+V CDG+ V+LP +KPATAS
Sbjct: 176 MELKRSMKRKSQLVALKVELETKVEAQMGVFQTPRVGIKVLCDGVAVSLPDDEKPATASA 235
Query: 238 SNAKCNVDVRFKIWKWTVG 256
N C VDVRFK+WKWTVG
Sbjct: 236 ENTACQVDVRFKVWKWTVG 254
>Glyma06g05490.1
Length = 256
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 114/232 (49%), Gaps = 10/232 (4%)
Query: 31 QLYGANRPAYRPQPLH----XXXXXXXXXXXXXWXXXXXXXXXXXXGGAGVAFYLLYRPH 86
QLY NR YRPQ + W G A Y+LYRPH
Sbjct: 26 QLYNPNRQVYRPQSHYHRRGQRSHRNLCCCCCFWTILTLLAVALLAAIVGAALYVLYRPH 85
Query: 87 HPTFSVXXXXXXXXXXXXXXXXXXK----FDLTVAATNPNKKNIAFSYLPTSITILSGDV 142
P FSV F+LT+ A NPN ++ F Y P S+T+LS V
Sbjct: 86 RPEFSVTNLRIAKMNLTTSADSPSHLTTLFNLTLIAKNPNN-HLVFFYDPFSVTVLSNSV 144
Query: 143 DVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKLDTKVK 202
VG+G++ F K N T L++ +S S + G P+++++DTKVK
Sbjct: 145 PVGNGSVTAFTSDKNNQTSLRAVLSGS-QDLDTDSLTSLRSGLKMKRGFPVEIQMDTKVK 203
Query: 203 ATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTSNAKCNVDVRFKIWKWT 254
M LK+ +VGIRV+CDGIR T+P+GK PA AS +++C VD+R KIWK++
Sbjct: 204 MKMDWLKSKKVGIRVTCDGIRGTVPSGKTPAVASVVDSECKVDLRIKIWKFS 255
>Glyma04g05460.1
Length = 256
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 113/232 (48%), Gaps = 10/232 (4%)
Query: 31 QLYGANRPAYRPQPLH----XXXXXXXXXXXXXWXXXXXXXXXXXXGGAGVAFYLLYRPH 86
QLY NR YRPQ + W G A Y+LYRPH
Sbjct: 26 QLYNPNRQVYRPQSHYHRRGQRSHRNFCCCCCFWTILTLLAVALLAAIVGAALYVLYRPH 85
Query: 87 HPTFSVXXXXXXXXXXXXXXXXXXK----FDLTVAATNPNKKNIAFSYLPTSITILSGDV 142
P FSV F+LT+ A NPN ++ F Y P S+T+ S V
Sbjct: 86 RPEFSVTNLRIAKMNLTTSADSPSHLTTLFNLTLIAKNPNN-HLVFFYDPFSMTVFSNSV 144
Query: 143 DVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKLDTKVK 202
VG+G++ F K N T L++ +S S + G P+++++DTKVK
Sbjct: 145 PVGNGSVTAFTSDKNNQTSLRAVLSGS-QDLDTDSLTSLRSGLKMKRGFPVEIQMDTKVK 203
Query: 203 ATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTSNAKCNVDVRFKIWKWT 254
M LK+ +VGIRV+CDGIR T+P+GK PA AS +++C VD+R KIWK++
Sbjct: 204 MKMDWLKSKKVGIRVTCDGIRGTVPSGKSPAVASVVDSECKVDLRIKIWKFS 255
>Glyma09g22340.1
Length = 154
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 68/142 (47%), Gaps = 26/142 (18%)
Query: 31 QLYGANRPAYRPQPLHXXXXXXXXXXXXXWXXXXXXXXXXXXGGAGVAFYLLYRPHHPTF 90
QLY A P Y PQP H G AG FYLLY HHPTF
Sbjct: 27 QLYSATHPTYCPQPHHRH------------------------GVAGKVFYLLYHRHHPTF 62
Query: 91 SVX-XXXXXXXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTSITILSGDVDVGDGTI 149
V FD+ + TNPNKK I F+Y PT I IL D++V D T+
Sbjct: 63 IVTPLKLSYLNLTSSSNTLNSHFDINFSTTNPNKK-IFFAYNPTFIVILCDDINVDDNTV 121
Query: 150 PTFHHGKKNTTLLKSSISSSGH 171
P+F KKNTTL+K+SI SSGH
Sbjct: 122 PSFQQPKKNTTLIKASILSSGH 143
>Glyma10g26590.1
Length = 97
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 83 YRPHHPTFSVXXXXXX-XXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTSITILSGD 141
YRPHHPTF V +FD+ V+A NPNKK I F+Y PT I L
Sbjct: 1 YRPHHPTFIVTSLKLSYLNLTSSSNTLNSRFDIIVSAMNPNKK-ILFAYNPTFIANL--- 56
Query: 142 VDVGDGTIPTFHHGKKNTTLLKSSISSSGH 171
+DV + T+ F H KKNTTL+K+SI SSGH
Sbjct: 57 IDVNNNTVLGFQHPKKNTTLIKTSILSSGH 86
>Glyma11g31840.1
Length = 246
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 80 YLLYRPHHPTFSVXXXXXXXXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTSITILS 139
YL++RP P +SV F++ + A NPNKK + + I+
Sbjct: 81 YLVFRPKLPKYSVDQLRISQFNVSDNNTLYATFNVAITARNPNKKIGIYYEGGSHISAWY 140
Query: 140 GDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKLDT 199
+ + +G++P F+ G +NTT+L ++ H+ N +PL +K++
Sbjct: 141 METQLCEGSLPKFYQGHRNTTVLDLPLTGQAHDANGLVNRIQEQLQQT-NNVPLNLKVNQ 199
Query: 200 KVKATMGKLKTPRVGIRVSC 219
V+ +GKLK +V RV C
Sbjct: 200 PVRVKLGKLKLFKVKFRVRC 219
>Glyma14g38890.1
Length = 288
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 79 FYLLYRPHHPTFSVXXXXXXXXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTS-ITI 137
YL++RP P +SV F+LT+ A NPNKK I Y S I+
Sbjct: 123 LYLVFRPKLPKYSVDELKVTNFDLADNNSLSVTFNLTITARNPNKK-IGIDYRGGSHISA 181
Query: 138 LSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKL 197
D + +G++P F+ G +NTT+L ++ + N +PL +++
Sbjct: 182 WYMDTKLCEGSLPKFYQGHRNTTILSIPLTGKTQDATGLQNTLQNQLQETGN-VPLNLRV 240
Query: 198 DTKVKATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTSNAKCNVDVRF 248
V+ +GKLK ++ RV C R+ + + ++ ++ C R
Sbjct: 241 KQPVRIKLGKLKLFKIKFRVRC---RIVVDSLSANSSIRIQSSSCKFRFRL 288
>Glyma02g40580.1
Length = 255
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 79 FYLLYRPHHPTFSVXXXXXXXXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTS-ITI 137
YL++RP P +SV F+LT+ A NPNKK I Y S I+
Sbjct: 90 LYLVFRPKLPKYSVDELRVTHFDLADNNSLSVTFNLTITARNPNKK-IGIDYRGGSHISA 148
Query: 138 LSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKL 197
D + +G++P F+ G +NTT+L ++ + N +PL +K+
Sbjct: 149 WYMDTKLCEGSLPKFYQGHRNTTVLSIPLTGKTQDATGLQSTLQNQLQESGN-VPLNLKV 207
Query: 198 DTKVKATMGKLKTPRVGIRVSC 219
V+ +GKLK ++ RV C
Sbjct: 208 KQPVRIKLGKLKLFKIKFRVRC 229
>Glyma18g05450.1
Length = 244
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Query: 80 YLLYRPHHPTFSVXXXXXXXXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTSITILS 139
YL++RP P +SV F++ + A NPNKK + + I+
Sbjct: 80 YLVFRPKLPKYSVDQLRISQFNVSDNNTLYATFNVAITARNPNKKIGIYYEGGSHISAWY 139
Query: 140 GDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKLDT 199
D + +G++P F+ G +NTT+L ++ + N +PL +K++
Sbjct: 140 MDTKLCEGSLPKFYQGHRNTTVLDLPLTGQAPDASGLVNRIQEQLQQT-NNVPLNLKVNQ 198
Query: 200 KVKATMGKLKTPRVGIRVSC 219
V+ GKLK +V RV C
Sbjct: 199 PVRVKFGKLKLFKVKFRVRC 218
>Glyma14g04580.1
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 74 GAGVAFYLLYRPHHPTFSVXXXXXX---XXXXXXXXXXXXKFDLTVAATNPNKKNIAFSY 130
AGV YL++RP P +S+ +F++TV A NPN K I Y
Sbjct: 102 AAGV-LYLVFRPEAPKYSIENITVRGINLTSPSSVAAISPEFNVTVKADNPNDK-IGIRY 159
Query: 131 L-PTSITILSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXN 189
L +S + D + +G +P F+ N T+ +++ G E
Sbjct: 160 LKDSSAEVFYKDARLCNGALPAFYQPSNNVTVFGTALRGDGIELRSEDRRALLEAQTKRR 219
Query: 190 GLPLKVKLDTKVKATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTSNAKCNVDV 246
+PL V++ VK +G ++T ++ ++V+CD + + A A + +C+ DV
Sbjct: 220 -VPLTVRIRAPVKIKVGSIRTWKITVKVNCD-----VTVNELTAQAKIVSKRCSYDV 270
>Glyma02g44200.1
Length = 273
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 12/177 (6%)
Query: 74 GAGVAFYLLYRPHHPTFSVXXXXXX---XXXXXXXXXXXXKFDLTVAATNPNKKNIAFSY 130
AGV YL++RP P +S+ F++TV A NPN K I Y
Sbjct: 102 AAGV-LYLVFRPEEPKYSIENIAVRGINLTSPSSTAAMSPVFNVTVKADNPNDK-IGIRY 159
Query: 131 LP-TSITILSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXN 189
L +S + D + +G +P F+ N T+ +++ G E
Sbjct: 160 LKDSSAEVFYKDARLCNGALPAFYQPSNNVTVFGTALRGDGIELRSEVRRALLEAQTKRR 219
Query: 190 GLPLKVKLDTKVKATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTSNAKCNVDV 246
+PL V++ VK +G +KT ++ ++V+C + + A A + +CN DV
Sbjct: 220 -VPLTVRIRAPVKIKVGSVKTWKITVKVNCH-----MTVNELTARAKIVSKRCNYDV 270
>Glyma10g31730.1
Length = 252
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 79 FYLLYRPHHPTFSVXXXXXXXXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTSITIL 138
YL+++P P +SV KFD+ + ATNPNKK + +++
Sbjct: 88 LYLVFQPKLPDYSVDTLRISDLRLNFDMSLYAKFDVKITATNPNKKIGIYYEKGGKLSVW 147
Query: 139 SGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKLD 198
+ + +G++P F+ G +N T+L ++S SG +PL +K+
Sbjct: 148 YTNTRLCEGSLPQFYQGHENKTVL--NVSLSGQVQSGSTLMNALQQQQQTGRIPLDLKVH 205
Query: 199 TKVKATMGKLKTPRVGIRVSC 219
+ +G+LK +V + C
Sbjct: 206 APIAIKLGRLKLMKVRVLGEC 226
>Glyma20g35880.1
Length = 250
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 79 FYLLYRPHHPTFSVXXXXXXXXXXXXXXXXXXKFDLTVAATNPNKKNIAFSYLPTSITIL 138
YL+++P P +SV +FD+ + ATNPNKK + +++
Sbjct: 86 LYLVFKPKLPDYSVDTLRISDLRLNFDMSLYARFDVKITATNPNKKIGIYYKKGGRLSVW 145
Query: 139 SGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHEXXXXXXXXXXXXXXXXNGLPLKVKLD 198
+ + +G++P F+ G +N T+L ++S SG +PL +K+
Sbjct: 146 YTNTRLCEGSLPQFYQGHENKTML--NVSLSGQVQSGSTLMNALQQQQQTGRIPLDLKVH 203
Query: 199 TKVKATMGKLKTPRVGIRVSC 219
+ +G+LK +V + C
Sbjct: 204 APIAIKLGRLKLMKVRVLGEC 224