Miyakogusa Predicted Gene

Lj3g3v0307990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0307990.1 Non Chatacterized Hit- tr|A2Q447|A2Q447_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,44.76,0.000000004,seg,NULL,BW616849.path2.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g02760.1                                                        49   1e-06

>Glyma15g02760.1 
          Length = 276

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 24/30 (80%)

Query: 122 SDPGSDSGVRFETACLYPFTSSSSAMQRKI 151
           S  GSDSG+R E+ C YPFTSSSS MQRKI
Sbjct: 94  SGSGSDSGLRLESTCQYPFTSSSSVMQRKI 123