Miyakogusa Predicted Gene
- Lj3g3v0290530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0290530.1 tr|Q5JQR9|Q5JQR9_ORYSJ OSJNba0093F12.23 protein
OS=Oryza sativa subsp. japonica GN=OSJNba0093F12.23
,58.23,6e-17,seg,NULL; Tudor/PWWP/MBT,NULL; PWWP,PWWP,CUFF.40470.1
(772 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g01530.1 763 0.0
Glyma08g20950.1 263 7e-70
Glyma11g01440.1 166 7e-41
Glyma11g09840.1 164 3e-40
Glyma01g43970.1 163 5e-40
Glyma09g26250.1 99 2e-20
Glyma09g26210.1 74 7e-13
Glyma09g26160.1 74 9e-13
Glyma09g26170.1 71 4e-12
Glyma12g02150.1 60 1e-08
>Glyma07g01530.1
Length = 768
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/803 (56%), Positives = 500/803 (62%), Gaps = 73/803 (9%)
Query: 8 MGSSGE---NGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGRE 64
MGSSGE N IDAS GGLVWVRRRNGSWWPGRIMGLHELSES LVSPRSGTPVKLLGRE
Sbjct: 1 MGSSGESNLNVIDASVGGLVWVRRRNGSWWPGRIMGLHELSESCLVSPRSGTPVKLLGRE 60
Query: 65 DASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESA 124
DASVDWYNLE+SKRVK FRCGEYD+CIE YARREDAILHALELESA
Sbjct: 61 DASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAANSSKKAVKYARREDAILHALELESA 120
Query: 125 RLGKESLNFCSRSDTLGGEPVGLAGESPIISCSGXXXXXXXXXXXXXXXXXXXXXXXHQS 184
L KESL+ CSR D E V + + QS
Sbjct: 121 HLDKESLSLCSRLDKPDNEDVVDDLSDSDDNSNAAPELS-------------------QS 161
Query: 185 EISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLGAG 244
IS EEPN G+ KMQS+QGRRRRTPNDSEDDG EGVKRMRGLEDLGIGVV K +V G
Sbjct: 162 GISFEEPNHYGTLKMQSVQGRRRRTPNDSEDDGFEGVKRMRGLEDLGIGVVSKRQVQGTS 221
Query: 245 TPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRRPL 304
EI A NS GN L NGT VNGGKG+ STLKR+R+QVAN HE LKRKNRRRPL
Sbjct: 222 ATEIVHHISASLNNSTAGNCLANGTSVNGGKGYSSTLKRKRSQVANAHELLKRKNRRRPL 281
Query: 305 TKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVSTEA 364
TKVLESTAMVSVP IC+ L SS SSP G T+ P H STEA
Sbjct: 282 TKVLESTAMVSVPVICNQLPSSSSSPLCGKTF----------------PTTTHNSDSTEA 325
Query: 365 AFENGTSADIQEDGR-ETSQTNYTVKENEASGISGQIWNDFSDKLFDVPFMKVGREERPL 423
A ENGTS + + G + SQ N+ VKENE GI G + D D+LFDVPF+ V EE+
Sbjct: 326 ACENGTSLIVHDHGSDDASQINHEVKENETFGIPGLVGKDSPDELFDVPFVGVLGEEKHT 385
Query: 424 TG------------------FSPVLASCSSGKPGVDVLGQQSRHLGQSEALSARNEGYST 465
TG FSP+ SCSSGKP V LG+QS + Q EA+S RNE +
Sbjct: 386 TGMPQYLNFHSYQNALQFQYFSPIQVSCSSGKPQVSALGEQSCNASQCEAVSLRNESKNE 445
Query: 466 -GFTSSIADHNITDLRAEIGSSEWLSKGKRNSRHAR---KEALRTHVDMYDKFSTHLAGV 521
G TSS A H I RA+ GSS+W SKGKRNSRH K A R +VD + S +L+G+
Sbjct: 446 PGCTSSAAGHIIVGHRADKGSSKWQSKGKRNSRHTSKNIKHASRKYVDTDPQSSAYLSGI 505
Query: 522 ENSDGYSQGTGQKADWNITGAPVASYNGTSQARCKQVAEGELGGFRDLSKRIKG-TRDVK 580
SDG QG QK DWN GAP SY TSQ +CK VA G+L GFRDL+K IKG T + K
Sbjct: 506 GISDGIYQGACQKVDWNGMGAPNTSYKCTSQVKCKPVAVGQLEGFRDLNKHIKGTTTEAK 565
Query: 581 LLPDRSLTPQVSLPYRQPRLPLAPNHPMLDCPGRNSCSDGSLYDVKIEIKSSYRPQHVPL 640
LLPD SLTPQ LPYR R + + D PGRN SD SLYDVK+E+KSSYRPQHVPL
Sbjct: 566 LLPDGSLTPQRLLPYRHSRFTVNSRYQTADFPGRNYYSDASLYDVKLEVKSSYRPQHVPL 625
Query: 641 VSLASKLNSQAFIGHPLTVEVMPDGQCDDMMRMYGPGLEGGDTSGVVKP----RIKPXXX 696
VSL SKLN +AFIGHPL VEV+ +G CD M+ G LE GD KP R
Sbjct: 626 VSLVSKLNGKAFIGHPLAVEVLVEGHCDKMLSDIGCDLEVGDVYCAAKPNSVTRRIHSKN 685
Query: 697 XXXXXXXXXXXXXXXXXXXXXTRKLSSLTGQKK--SERK----KVGTPVVACIPLSVVFS 750
RKLSSLTG K+ ERK K+ PV+ACIPL VVFS
Sbjct: 686 LTRFSPSKSSKMKKTGLLNKKIRKLSSLTGHKQLEEERKPVVDKLKGPVIACIPLKVVFS 745
Query: 751 RINEAVSGQARPAHRAPPT-SNP 772
RINEAVSGQAR +RA PT SNP
Sbjct: 746 RINEAVSGQARSTYRALPTSSNP 768
>Glyma08g20950.1
Length = 577
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/240 (61%), Positives = 162/240 (67%), Gaps = 17/240 (7%)
Query: 183 QSEISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLG 242
QS IS EEPN NG+ KMQS+QGRRRRTPNDSEDDG EGVKRMRGLEDLGIGVV K KV G
Sbjct: 28 QSGISFEEPNHNGTLKMQSVQGRRRRTPNDSEDDGFEGVKRMRGLEDLGIGVVSKRKVQG 87
Query: 243 AGTPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRR 302
G EI Q A NS GN L NGT VNGGKG+ STLKR+R+QVAN HE LKRKNR R
Sbjct: 88 TGATEIVQHISASLNNSTAGNCLANGTSVNGGKGYSSTLKRKRSQVANAHELLKRKNRHR 147
Query: 303 PLTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVST 362
PLTKVLESTAMVSVP ICD L SS SP G T+ P H ST
Sbjct: 148 PLTKVLESTAMVSVPVICDQLPSSSGSPLCGKTF----------------PTPTHNSDST 191
Query: 363 EAAFENGTSADIQEDGR-ETSQTNYTVKENEASGISGQIWNDFSDKLFDVPFMKVGREER 421
EA ENGTS + G + SQ N+ VKENEASG+ G + D D+LFDVPF+ V EE+
Sbjct: 192 EATCENGTSLIGHDHGSDDASQINHKVKENEASGLPGLVGKDSPDELFDVPFVGVLGEEK 251
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 140/230 (60%), Gaps = 16/230 (6%)
Query: 558 VAEGELGGFRDLSKRIK-GTRDVKLLPDRSLTPQVSLPYRQPRLPLAPNHPMLDCPGRNS 616
+++ +L G RDL+K +K T + KLLPD SLTPQ LPYR R + + D PGRN
Sbjct: 349 LSKSQLEGLRDLNKHVKVTTTEAKLLPDGSLTPQRLLPYRHSRFTVNSRYQTADFPGRNY 408
Query: 617 CSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMMRMYGP 676
CSD SLYDVK+E+KSSYRPQHVPLVSL SKLN +AFIGHPL VEVM +G CD M+ G
Sbjct: 409 CSDASLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFIGHPLAVEVMVEGHCDKMLSDIGC 468
Query: 677 GLEGGDTSGVVKP-----RIKPXXXXXXXXXXXXXXXXXXXXXXXXTRKLSSLTGQKKSE 731
LE GD V KP RI RKLSSLTG ++SE
Sbjct: 469 DLEVGDVYCVAKPNSVTGRIH-SKNSTRFSPSKSSKMKKTGLLNKKIRKLSSLTGHRQSE 527
Query: 732 RKKVGT--------PVVACIPLSVVFSRINEAVSGQARPAHRAPPT-SNP 772
++ PV+ACIPL VVFSRINEAVSGQAR HRA PT SNP
Sbjct: 528 EERKEKKPVVDKKGPVIACIPLQVVFSRINEAVSGQARSTHRALPTSSNP 577
>Glyma11g01440.1
Length = 674
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 87/122 (71%)
Query: 8 MGSSGENGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDAS 67
M SSG +D G +VWVRRRNGSWWPG+I+G LS S L SPRSGTPVKLLGREDAS
Sbjct: 1 MESSGLGPVDCDVGSIVWVRRRNGSWWPGQILGPDHLSASHLTSPRSGTPVKLLGREDAS 60
Query: 68 VDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLG 127
VDWYNLE+SKRVK FRCGE+D CIE YARREDAILHALELE L
Sbjct: 61 VDWYNLEKSKRVKAFRCGEFDGCIERAESAQGMPLKKREKYARREDAILHALELEKQMLK 120
Query: 128 KE 129
K+
Sbjct: 121 KQ 122
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 622 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMMRMY------G 675
L DV +++++SYR VP+VS+ SKL+ ++ IGHP+ +E + DG D + G
Sbjct: 441 LVDVDLKVQASYRKAPVPIVSITSKLDGKSIIGHPIQIESLKDGSSDKLFSAIDDFSNDG 500
Query: 676 PGLEGGDTSGVVKP 689
G EG S V+ P
Sbjct: 501 TGFEG---SSVLPP 511
>Glyma11g09840.1
Length = 757
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 84/113 (74%)
Query: 16 IDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDASVDWYNLER 75
+D G +VWVRRRNGSWWPG+I+G +LS + L SPRSGTPVKLLGREDASVDWYNLE+
Sbjct: 1 MDCGVGSIVWVRRRNGSWWPGQILGHDDLSAAHLTSPRSGTPVKLLGREDASVDWYNLEK 60
Query: 76 SKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGK 128
SKRVK FRCGE+DDCIE YARREDAILHALELE L K
Sbjct: 61 SKRVKAFRCGEFDDCIEKAEAAQGGPLKKREKYARREDAILHALELEKQILKK 113
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 622 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMM 671
L DV +++++SYR +HVP +SL SKL+ +A +GHP+ VE + DG D +
Sbjct: 526 LVDVDLKVQASYRKEHVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILF 575
>Glyma01g43970.1
Length = 664
Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 8 MGSSGENGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDAS 67
M SSG +D G +VWVRRRNGSWWPG+I+G LS S L SPRSGTPVKLLGREDAS
Sbjct: 1 MESSGLGPVDCDVGSIVWVRRRNGSWWPGQILGPDHLSASHLTSPRSGTPVKLLGREDAS 60
Query: 68 VDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLG 127
VDWYNLE+SKRVK FRCGE+D CIE YARREDAILHAL+LE L
Sbjct: 61 VDWYNLEKSKRVKAFRCGEFDGCIERAESAQGMPLKKREKYARREDAILHALDLERQMLK 120
Query: 128 -KESLNFC 134
+E + C
Sbjct: 121 TQEKIGSC 128
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 622 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMMRMY------G 675
L DV +++++SYR VP+VS+ SKL+ ++ IGHP+ +E + DG D + G
Sbjct: 431 LVDVDLKVQASYRKAPVPIVSITSKLDGKSIIGHPIQIESLKDGSSDKLFSAIDDFSNDG 490
Query: 676 PGLEGGDTSGVVKP 689
G EG S V+ P
Sbjct: 491 NGFEG---SSVLPP 501
>Glyma09g26250.1
Length = 163
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 65/124 (52%), Gaps = 25/124 (20%)
Query: 12 GENGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDASVDWY 71
G +D G +VWVRRRNGSWWP +I+GL LS S+L SPRSGTPVKLL +ED ++DWY
Sbjct: 2 GLGLVDCDVGSIVWVRRRNGSWWPSQILGLDHLSTSNLTSPRSGTPVKLLRKEDPNIDWY 61
Query: 72 NLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGKESL 131
NL K Y RED ILHAL+LE + +L
Sbjct: 62 NLRNPSAKKE-------------------------KYTFREDVILHALQLERQIVDDSAL 96
Query: 132 NFCS 135
S
Sbjct: 97 TLAS 100
>Glyma09g26210.1
Length = 181
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 23/100 (23%)
Query: 30 NGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDASVDWYNLERSKRVKPFRCGEYDD 89
NGS WP +I+GL LS S+L SPRSGTPVKLL +ED++ DW + +K
Sbjct: 2 NGSLWPSQILGLDHLSTSNLTSPRSGTPVKLLRKEDSNKDWAESTQGMLLKK-------- 53
Query: 90 CIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGKE 129
Y REDAILHAL+LE L K+
Sbjct: 54 ---------------KEKYTHREDAILHALQLERQMLKKQ 78
>Glyma09g26160.1
Length = 106
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 16 IDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGRE 64
+D G +VWVRRRNGSWWPG+I+GL LS S L SPRSGTPVKL +E
Sbjct: 5 VDCDVGSVVWVRRRNGSWWPGQILGLDHLSTSHLTSPRSGTPVKLHRKE 53
>Glyma09g26170.1
Length = 181
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 50/100 (50%), Gaps = 23/100 (23%)
Query: 30 NGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDASVDWYNLERSKRVKPFRCGEYDD 89
NGS WP +I+GL LS S L SP SGTPVKLL +ED++ DW + +K
Sbjct: 2 NGSLWPSQILGLDHLSTSHLTSPHSGTPVKLLRKEDSNKDWAESTQGMLLKK-------- 53
Query: 90 CIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGKE 129
Y REDAILHAL+LE L K+
Sbjct: 54 ---------------KEKYTHREDAILHALQLERQMLKKQ 78
>Glyma12g02150.1
Length = 482
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 622 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMM 671
L DV +++++SYR +HVP +SL SKL+ +A +GHP+ VE + DG D +
Sbjct: 276 LVDVDLKVQASYRKEHVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILF 325