Miyakogusa Predicted Gene

Lj3g3v0290390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0290390.1 Non Chatacterized Hit- tr|I3SH56|I3SH56_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.51,0,seg,NULL;
Snf7,Snf7; coiled-coil,NULL; CHARGED MULTIVESICULAR BODY PROTEIN
1A,NULL; CHARGED MULTIVES,CUFF.40453.1
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g02600.1                                                       344   3e-95
Glyma13g42840.1                                                       344   3e-95
Glyma15g19000.1                                                        49   5e-06
Glyma09g07920.1                                                        49   5e-06

>Glyma15g02600.1 
          Length = 203

 Score =  344 bits (883), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 171/202 (84%), Positives = 179/202 (88%)

Query: 3   GSAEKLMNQIMELKFTSKSLQRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENAIRK 62
           G+ EKLMNQIMELKFTSKSLQRQ+R                   GNMDGARIYAENAIRK
Sbjct: 2   GNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIRK 61

Query: 63  RTEQMNYLRLSSRLDAVVARLDTQAKMNTISKSMGNIVKSLESTLATGNLQKMSETMDSF 122
           RTEQMNYLRL+SRLDAVVARLDTQAKM TISKSMGNIVKSLES+LATGNLQKMSETMDSF
Sbjct: 62  RTEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGNLQKMSETMDSF 121

Query: 123 EKQFVNMEVQAEFMESSMAGSTSLSTPEGDVNNLMQQVADDYGLEVSVGLPQAAAHAVPV 182
           EKQFVNMEVQAEFMES+MAGSTSLSTPEG+VN+LMQQVADDYGLEVSVGLPQ AAHAVP 
Sbjct: 122 EKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPA 181

Query: 183 KEAEKVDEDDLSRRLAELKARG 204
           KEA+KVDEDDLSRRLAELKARG
Sbjct: 182 KEADKVDEDDLSRRLAELKARG 203


>Glyma13g42840.1 
          Length = 203

 Score =  344 bits (883), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 171/202 (84%), Positives = 179/202 (88%)

Query: 3   GSAEKLMNQIMELKFTSKSLQRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENAIRK 62
           G+ EKLMNQIMELKFTSKSLQRQ+R                   GNMDGARIYAENAIRK
Sbjct: 2   GNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIRK 61

Query: 63  RTEQMNYLRLSSRLDAVVARLDTQAKMNTISKSMGNIVKSLESTLATGNLQKMSETMDSF 122
           RTEQMNYLRL+SRLDAVVARLDTQAKM TISKSMGNIVKSLES+LATGNLQKMSETMDSF
Sbjct: 62  RTEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGNLQKMSETMDSF 121

Query: 123 EKQFVNMEVQAEFMESSMAGSTSLSTPEGDVNNLMQQVADDYGLEVSVGLPQAAAHAVPV 182
           EKQFVNMEVQAEFMES+MAGSTSLSTPEG+VN+LMQQVADDYGLEVSVGLPQ AAHAVP 
Sbjct: 122 EKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPA 181

Query: 183 KEAEKVDEDDLSRRLAELKARG 204
           KEA+KVDEDDLSRRLAELKARG
Sbjct: 182 KEADKVDEDDLSRRLAELKARG 203


>Glyma15g19000.1 
          Length = 223

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 61/123 (49%)

Query: 47  GNMDGARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMNTISKSMGNIVKSLEST 106
           G M   R+ A++ +R R +   + +L S+L  V  R+ T      + ++M  + K++   
Sbjct: 54  GQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQM 113

Query: 107 LATGNLQKMSETMDSFEKQFVNMEVQAEFMESSMAGSTSLSTPEGDVNNLMQQVADDYGL 166
               NL  + + M  FE+Q   ME+ +E M  ++  +      E +  +L+ QV D+ G+
Sbjct: 114 NRQMNLPSLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGI 173

Query: 167 EVS 169
           +++
Sbjct: 174 DIN 176


>Glyma09g07920.1 
          Length = 223

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 61/123 (49%)

Query: 47  GNMDGARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMNTISKSMGNIVKSLEST 106
           G M   R+ A++ +R R +   + +L S+L  V  R+ T      + ++M  + K++   
Sbjct: 54  GQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQM 113

Query: 107 LATGNLQKMSETMDSFEKQFVNMEVQAEFMESSMAGSTSLSTPEGDVNNLMQQVADDYGL 166
               NL  + + M  FE+Q   ME+ +E M  ++  +      E +  +L+ QV D+ G+
Sbjct: 114 NRQMNLPSLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGI 173

Query: 167 EVS 169
           +++
Sbjct: 174 DIN 176