Miyakogusa Predicted Gene

Lj3g3v0270520.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0270520.2 tr|F2DD79|F2DD79_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,74.55,0.000000000000004,
,CUFF.40394.2
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g02080.1                                                       138   2e-33
Glyma13g43260.1                                                       135   9e-33

>Glyma15g02080.1 
          Length = 194

 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/109 (66%), Positives = 88/109 (80%), Gaps = 5/109 (4%)

Query: 1   MSLLQLQLTSHALCSLPSFSNSFRPNRTFHCSKRLNFATTNIRAVGTVPERDLETTATD- 59
           MSLLQLQL+SHAL S+ S S++FRP    + SKR+++  T IRAVGTVPE+D ++  TD 
Sbjct: 1   MSLLQLQLSSHALRSITSSSHNFRPT---YSSKRVSYVRTRIRAVGTVPEKDSDSDTTDP 57

Query: 60  -EPPSVGFAFVSSVLLPDGTPDIHYRSATGGQKLRDIMLDSNIELYGPY 107
            EPP VG  FVSSVLLPDGTPD+H+RSA GGQ+LR IMLDSN+ELYGPY
Sbjct: 58  DEPPYVGLVFVSSVLLPDGTPDMHFRSACGGQRLRKIMLDSNVELYGPY 106


>Glyma13g43260.1 
          Length = 194

 Score =  135 bits (340), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 87/111 (78%), Gaps = 9/111 (8%)

Query: 1   MSLLQLQLTSHALCSLPSFSNSFRPNRTFHCSKRLNFATTNIRAVGTVP-ERDLE---TT 56
           MSLLQLQLTSHAL S+ S  ++FRP    + SKR+++  T IRAVGTVP E+D +   TT
Sbjct: 1   MSLLQLQLTSHALRSVSS--HNFRP---LYSSKRVSYVRTKIRAVGTVPDEKDSDSDITT 55

Query: 57  ATDEPPSVGFAFVSSVLLPDGTPDIHYRSATGGQKLRDIMLDSNIELYGPY 107
             DEPP VG  FVSSVLLPDGTPD+H+RSA GGQ+LR IMLDSN++LYGPY
Sbjct: 56  DPDEPPYVGLVFVSSVLLPDGTPDMHFRSACGGQRLRKIMLDSNVDLYGPY 106