Miyakogusa Predicted Gene
- Lj3g3v0258390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0258390.1 Non Chatacterized Hit- tr|I1K9D0|I1K9D0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,35.64,0.000000000006,WD40,WD40 repeat; seg,NULL;
WD_REPEATS_2,WD40 repeat; WD_REPEATS_REGION,WD40-repeat-containing
domai,CUFF.40828.1
(202 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g43290.1 275 2e-74
Glyma06g08920.1 76 2e-14
Glyma04g08840.1 75 6e-14
Glyma01g38900.1 62 4e-10
Glyma11g06420.1 60 1e-09
Glyma17g36520.1 54 8e-08
Glyma08g13850.1 49 3e-06
Glyma15g15220.1 48 6e-06
>Glyma13g43290.1
Length = 408
Score = 275 bits (703), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/199 (70%), Positives = 154/199 (77%), Gaps = 8/199 (4%)
Query: 2 DSSNSPDPTPSFAFRSTT----QNNFLRSRSTKETPYSNFLHSPPRLSCPTXXXXXXXX- 56
DS+ SPDPT SFAFRS++ Q+N LRS STKETP++N +HSPPRLSCPT
Sbjct: 3 DSAKSPDPTASFAFRSSSTTPPQSNLLRSHSTKETPFTNLIHSPPRLSCPTLSRSLQNSP 62
Query: 57 --XXXXXXXXXXXXKVSSDSLSDPQTTYHCASSVLRNDGQVLSIALSSNNGFVYTGSDSN 114
+ S SDPQTTYHCASSVLRNDGQ+LSI+LSSN G VYTGSDSN
Sbjct: 63 LHHRRQFSPPPSPPSPTKLSDSDPQTTYHCASSVLRNDGQILSISLSSN-GLVYTGSDSN 121
Query: 115 LVRVWKLPEFTEFGQLRTKACRVVALEVSNDTVYAAYGDGKIRTWTRTWDKVLKHVRLAT 174
LVRVWKLPEFTE GQLRTKACRVVAL+VSNDTVYAAYGDGKIR W RTWDKVLKHVRLAT
Sbjct: 122 LVRVWKLPEFTECGQLRTKACRVVALQVSNDTVYAAYGDGKIRVWRRTWDKVLKHVRLAT 181
Query: 175 IPKKVGYVRSYIGGKDKAV 193
IPK +GYVRSYI GKDK +
Sbjct: 182 IPKTLGYVRSYIAGKDKTM 200
>Glyma06g08920.1
Length = 371
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 78 PQTTYHCASSVLRNDGQVLSIALSSNNGFVYTGSDSNLVRVWKLPEFTEFGQLRTKACRV 137
P YHC +S+ R++G + +IA +S G V+TGS+S+ +RVWK P+ + G L+ + V
Sbjct: 44 PSLLYHCIASLHRHEGNIYAIA-ASTKGLVFTGSNSSRIRVWKQPDCMDRGYLKASSGEV 102
Query: 138 VALEVSNDTVYAAYGDGKIRTWTRTWDKVLKHVRLATIPKK 178
A+ ++ +++ + D KIR WT T K ++ T+P+K
Sbjct: 103 RAILAYSNMLFSTHKDHKIRIWTFTVSDSFKSKKVGTLPRK 143
>Glyma04g08840.1
Length = 353
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 78 PQTTYHCASSVLRNDGQVLSIALSSNNGFVYTGSDSNLVRVWKLPEFTEFGQLRTKACRV 137
P YHC +S+ R++G + +IA S G V+TGS+S+ +RVWK P+ + G L+ + V
Sbjct: 37 PSLLYHCIASLHRHEGNIYAIAAS--KGLVFTGSNSSRIRVWKQPDCMDRGYLKASSGEV 94
Query: 138 VALEVSNDTVYAAYGDGKIRTWTRTWDKVLKHVRLATIPKK 178
A+ ++ +++ + D KIR WT T K ++ T+P+K
Sbjct: 95 RAILAYSNMLFSTHKDHKIRIWTFTVSDSFKSKKVGTLPRK 135
>Glyma01g38900.1
Length = 449
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 73 DSLSDPQTTYHCASSVLRNDGQVLSIALSSNNGFVYTGSDSNLVRVWKLPEFTEFGQLRT 132
D+ S S++R +G + S+A + + +YTGSDS +RVWK + EF ++
Sbjct: 71 DAFSGSNENDALVGSLVREEGHIYSLAATKD--LLYTGSDSKNIRVWKNQK--EFAGFKS 126
Query: 133 KACRVVALEVSNDTVYAAYGDGKIRTWTRTWDKVLKHVRLATIPKKVGYVR 183
+ V A+ ++ + + + DG+IR W + +H R+AT+P Y++
Sbjct: 127 NSGLVKAIVIAGEKILTGHQDGRIRVWKVSGKNEQQHKRVATLPTLRNYIK 177
>Glyma11g06420.1
Length = 340
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 86 SSVLRNDGQVLSIALSSNNGFVYTGSDSNLVRVWKLPEFTEFGQLRTKACRVVALEVSND 145
S++R +G + S+A + + +YTGSDS +RVWK E EF ++ + V A+ ++ +
Sbjct: 13 GSLVREEGHIYSLAATKD--LLYTGSDSKNIRVWKNQE--EFAGFKSNSGLVKAIVIAGE 68
Query: 146 TVYAAYGDGKIRTWTRTWDKVLKHVRLATIPKKVGYVR 183
+ + DG+IR W + +H R+AT+P Y++
Sbjct: 69 KILTGHQDGRIRVWKVSGKNDQQHKRVATLPTLRNYIK 106
>Glyma17g36520.1
Length = 455
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 87 SVLRNDGQVLSIALSSNNGFVYTGSDSNLVRVWKLPEFTEFGQLRTKACRVVALEVSNDT 146
S++R +G + S+A S + +YTGSDS +RVWK E+ ++ + V + +S
Sbjct: 79 SLVREEGHIYSLAASGD--LLYTGSDSKNIRVWK--NLEEYSGFKSNSGLVKTIILSGQK 134
Query: 147 VYAAYGDGKIRTWTRTWDKVLKHVRLATIP 176
++ + DGKIR W + H R T+P
Sbjct: 135 IFTGHQDGKIRVWKVSPKNPSLHKRAGTLP 164
>Glyma08g13850.1
Length = 392
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 99 ALSSNNGFVYTGSDSNLVRVWKLPEFTEFGQLRTKACRVVALEVSND-TVYAAYGDGKIR 157
L+ +NG +Y+ S +++W+L +F L+ V A+ VSND TVY D +IR
Sbjct: 180 GLAVSNGAIYSVSWDRTLKIWRLSDFRCVESLKAHEDAVNAVAVSNDGTVYTGSADKRIR 239
Query: 158 TWTRTWDKVLKHVRLATIPKKVGYVRSYIGGKDKAV 193
W R + +HV +AT+ K V + D +V
Sbjct: 240 VWARPAGEK-RHVLVATLEKHKSAVNALALNDDASV 274
>Glyma15g15220.1
Length = 1604
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 81 TYHCASSVLRNDGQVLSIALSSNNGFVYTGSDSNLVRVWKLPEFTEFGQLR--TKACRVV 138
T +C +S +DG + +A+SSNN V + S+ ++RVW+LP+ LR T A +
Sbjct: 231 TAYCLASCRGHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAI 290
Query: 139 ALEVSNDTVY---AAYGDGKIRTW 159
A + VY ++ DG R W
Sbjct: 291 AFSPRPNAVYQLLSSSDDGTCRIW 314