Miyakogusa Predicted Gene

Lj3g3v0257290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0257290.1 tr|Q2HU52|Q2HU52_MEDTR TRNA-binding arm; t-snare
OS=Medicago truncatula GN=MtrDRAFT_AC149489g2v2
PE=,80.7,0,TMF_TATA_bd,TATA element modulatory factor 1 TATA binding;
TMF_DNA_bd,TATA element modulatory factor,CUFF.40390.1
         (996 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g01980.2                                                      1231   0.0  
Glyma15g01980.1                                                      1231   0.0  
Glyma13g43330.1                                                       885   0.0  

>Glyma15g01980.2 
          Length = 988

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1003 (68%), Positives = 747/1003 (74%), Gaps = 24/1003 (2%)

Query: 1   MAWFNNAKTSWGNFPDLAGAVNKLQESVKSIEKNFDTALGFEEKSESSNDGGNEASGLWP 60
           MAWF+  K +WGNFPDLAGAVNKLQESVK+IEKNFD+ALGFEEK ESSN    E +G WP
Sbjct: 1   MAWFS-GKNTWGNFPDLAGAVNKLQESVKNIEKNFDSALGFEEKGESSN----EDAGSWP 55

Query: 61  ASADTKNLFNPVMAFMGNKTEENSEETSDDVESSQKESEIDNSVEKGESPDHIPVAEGKX 120
             AD K LFNPVM+FM NK+EE +EE S   E SQ++SE + S EK +S DH PVAEG  
Sbjct: 56  IPADRKTLFNPVMSFMANKSEETTEEMSQKDEYSQQDSETEKSPEKPKSLDHTPVAEGND 115

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEPADGTTTQNLDQEKDEDQLPEMPVELP 180
                                          TE ADGT  QNLD  K+E+ L E+PVELP
Sbjct: 116 TLETDNTMHMEPEENTTKEENKVVKEEDGEHTESADGTVAQNLDHGKEENHLLELPVELP 175

Query: 181 ESPVQKFESLDSVDGSQEKEIAEVGTSESPVSMQPMAPDLADDVVEGSTSEPGESHTISD 240
           ESPV+K ES DSV+ SQEKEIA+ G+S S VS+Q M  +L D+VVEG T+E GESH ISD
Sbjct: 176 ESPVEKLESSDSVEHSQEKEIADPGSSGSLVSVQFMPSNLGDNVVEGVTTESGESHDISD 235

Query: 241 VHENIQVETKDENTEET-VQIEESGDRFSSVQPXXXXXXXXXXXXXXHVLHSVAPETTDN 299
            HEN QVETK+E+ EE  VQ E+S  R SSVQP               +L SV  E T+N
Sbjct: 236 GHENSQVETKEESKEEERVQAEQSEKRNSSVQPEASSDSENRDDTDTSILQSVTSEETNN 295

Query: 300 IDQSHNEYLSGATPPNDLVLHENERNLESSDAVSDLVSHENEPTIEENETDHIANHVELD 359
            DQS+ E+LS  TPPN           ESS  V+D+ S ENE T +ENE +H+A+ VE D
Sbjct: 296 TDQSNIEHLSSVTPPN-----------ESSKVVTDMFSPENETTAKENEREHLAHDVETD 344

Query: 360 MKEQHLSSVGDMHDSDSAVELDRVKRDMKMMEXXXXXXXXXXXXXXXXXXKLMNENEQLK 419
           MKE+HLSS   M DS S +EL+RVKR++KMME                  KLMNENEQLK
Sbjct: 345 MKERHLSSERTMSDSGSMLELERVKREIKMMEAALQGAARQAQAKADEIAKLMNENEQLK 404

Query: 420 ALIEDLKRKSNEAEVESLREEYHQRVTTLERRIYALTKERDTLRREQNKKSDAAALLKEK 479
           A+IED KRKSNEAEVESLREEYHQRV TLER++YALTKERDTLRREQNKKSDAAALLKEK
Sbjct: 405 AVIEDFKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEK 464

Query: 480 DEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQIEENKVESIKRDK 539
           DEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQ+EENKVESIKRDK
Sbjct: 465 DEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQVEENKVESIKRDK 524

Query: 540 TATEKLLQETIEKHQNELAAQKEYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 599
           TATEKLLQETIEKHQNE+AAQKEYY                                   
Sbjct: 525 TATEKLLQETIEKHQNEIAAQKEYYTNALAAAKEAEALAEARANNEARTELESRLREAEE 584

Query: 600 XXXMLVQTLEELRQTLSRKEQQAVFKEDMLHRDIEDLQKRYQASERRCEELITQVPESTR 659
              MLVQ LEELRQTLSRKEQQAVFKEDML RDIEDLQKRYQASERRCEELITQVPESTR
Sbjct: 585 RESMLVQALEELRQTLSRKEQQAVFKEDMLRRDIEDLQKRYQASERRCEELITQVPESTR 644

Query: 660 PLLRQIEAMQXXXXXXXXXXXXXXXSLNSRLQEAEAKAATSEERERSVNERLSQTLSRIN 719
           PLLRQIEAMQ               +LNSRLQEAEAKAAT+EERERSVNERLSQTLSRIN
Sbjct: 645 PLLRQIEAMQETNARKAEAWAAVERTLNSRLQEAEAKAATAEERERSVNERLSQTLSRIN 704

Query: 720 VLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADTHEGRVRQLEEDIRDLRQ 779
           VLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADT EGRVRQLEE+IRD+RQ
Sbjct: 705 VLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADTQEGRVRQLEEEIRDIRQ 764

Query: 780 KHKQELQEVLMHRELLQQEIEKEKAARADLERTARVHSA----QTPTTKLNSAFENGNLS 835
           K+KQELQE LM RE LQQEIEKEKAAR++LE+T RVHS+    QTPTTKLNSAFENGNLS
Sbjct: 765 KYKQELQEALMQREHLQQEIEKEKAARSELEKTLRVHSSPLSDQTPTTKLNSAFENGNLS 824

Query: 836 RKVXXXXXXXXXXXXHFLQASLDSSDSYSERR---ELSMSPYYMKSMTPSSFEAALRQKE 892
           RK+            HFLQASLDSSDS SERR   ELSMSPYY+KSMTPSSFEAALRQKE
Sbjct: 825 RKLSSASSLGSLEESHFLQASLDSSDSISERRNIGELSMSPYYVKSMTPSSFEAALRQKE 884

Query: 893 GELASYMSRLASLESIRDSLADELVKLTAQCEKLRAEAAVLPGLRSELEALRRRHSAAXX 952
           GELASYMSRLASLESIRDSLADELVK+T QCEKLR EAAVLPGLRSELEALRRRHSAA  
Sbjct: 885 GELASYMSRLASLESIRDSLADELVKMTEQCEKLRGEAAVLPGLRSELEALRRRHSAALE 944

Query: 953 XXXXXXXXXXXXRADIVDLKEMYREQVNLLVNKIQVMGSSMGN 995
                       RADIVDLKEMYREQVNLLVNKIQ MG SMG+
Sbjct: 945 LMGERDEELEELRADIVDLKEMYREQVNLLVNKIQTMGPSMGS 987


>Glyma15g01980.1 
          Length = 988

 Score = 1231 bits (3185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1003 (68%), Positives = 747/1003 (74%), Gaps = 24/1003 (2%)

Query: 1   MAWFNNAKTSWGNFPDLAGAVNKLQESVKSIEKNFDTALGFEEKSESSNDGGNEASGLWP 60
           MAWF+  K +WGNFPDLAGAVNKLQESVK+IEKNFD+ALGFEEK ESSN    E +G WP
Sbjct: 1   MAWFS-GKNTWGNFPDLAGAVNKLQESVKNIEKNFDSALGFEEKGESSN----EDAGSWP 55

Query: 61  ASADTKNLFNPVMAFMGNKTEENSEETSDDVESSQKESEIDNSVEKGESPDHIPVAEGKX 120
             AD K LFNPVM+FM NK+EE +EE S   E SQ++SE + S EK +S DH PVAEG  
Sbjct: 56  IPADRKTLFNPVMSFMANKSEETTEEMSQKDEYSQQDSETEKSPEKPKSLDHTPVAEGND 115

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEPADGTTTQNLDQEKDEDQLPEMPVELP 180
                                          TE ADGT  QNLD  K+E+ L E+PVELP
Sbjct: 116 TLETDNTMHMEPEENTTKEENKVVKEEDGEHTESADGTVAQNLDHGKEENHLLELPVELP 175

Query: 181 ESPVQKFESLDSVDGSQEKEIAEVGTSESPVSMQPMAPDLADDVVEGSTSEPGESHTISD 240
           ESPV+K ES DSV+ SQEKEIA+ G+S S VS+Q M  +L D+VVEG T+E GESH ISD
Sbjct: 176 ESPVEKLESSDSVEHSQEKEIADPGSSGSLVSVQFMPSNLGDNVVEGVTTESGESHDISD 235

Query: 241 VHENIQVETKDENTEET-VQIEESGDRFSSVQPXXXXXXXXXXXXXXHVLHSVAPETTDN 299
            HEN QVETK+E+ EE  VQ E+S  R SSVQP               +L SV  E T+N
Sbjct: 236 GHENSQVETKEESKEEERVQAEQSEKRNSSVQPEASSDSENRDDTDTSILQSVTSEETNN 295

Query: 300 IDQSHNEYLSGATPPNDLVLHENERNLESSDAVSDLVSHENEPTIEENETDHIANHVELD 359
            DQS+ E+LS  TPPN           ESS  V+D+ S ENE T +ENE +H+A+ VE D
Sbjct: 296 TDQSNIEHLSSVTPPN-----------ESSKVVTDMFSPENETTAKENEREHLAHDVETD 344

Query: 360 MKEQHLSSVGDMHDSDSAVELDRVKRDMKMMEXXXXXXXXXXXXXXXXXXKLMNENEQLK 419
           MKE+HLSS   M DS S +EL+RVKR++KMME                  KLMNENEQLK
Sbjct: 345 MKERHLSSERTMSDSGSMLELERVKREIKMMEAALQGAARQAQAKADEIAKLMNENEQLK 404

Query: 420 ALIEDLKRKSNEAEVESLREEYHQRVTTLERRIYALTKERDTLRREQNKKSDAAALLKEK 479
           A+IED KRKSNEAEVESLREEYHQRV TLER++YALTKERDTLRREQNKKSDAAALLKEK
Sbjct: 405 AVIEDFKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEK 464

Query: 480 DEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQIEENKVESIKRDK 539
           DEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQ+EENKVESIKRDK
Sbjct: 465 DEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQVEENKVESIKRDK 524

Query: 540 TATEKLLQETIEKHQNELAAQKEYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 599
           TATEKLLQETIEKHQNE+AAQKEYY                                   
Sbjct: 525 TATEKLLQETIEKHQNEIAAQKEYYTNALAAAKEAEALAEARANNEARTELESRLREAEE 584

Query: 600 XXXMLVQTLEELRQTLSRKEQQAVFKEDMLHRDIEDLQKRYQASERRCEELITQVPESTR 659
              MLVQ LEELRQTLSRKEQQAVFKEDML RDIEDLQKRYQASERRCEELITQVPESTR
Sbjct: 585 RESMLVQALEELRQTLSRKEQQAVFKEDMLRRDIEDLQKRYQASERRCEELITQVPESTR 644

Query: 660 PLLRQIEAMQXXXXXXXXXXXXXXXSLNSRLQEAEAKAATSEERERSVNERLSQTLSRIN 719
           PLLRQIEAMQ               +LNSRLQEAEAKAAT+EERERSVNERLSQTLSRIN
Sbjct: 645 PLLRQIEAMQETNARKAEAWAAVERTLNSRLQEAEAKAATAEERERSVNERLSQTLSRIN 704

Query: 720 VLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADTHEGRVRQLEEDIRDLRQ 779
           VLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADT EGRVRQLEE+IRD+RQ
Sbjct: 705 VLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADTQEGRVRQLEEEIRDIRQ 764

Query: 780 KHKQELQEVLMHRELLQQEIEKEKAARADLERTARVHSA----QTPTTKLNSAFENGNLS 835
           K+KQELQE LM RE LQQEIEKEKAAR++LE+T RVHS+    QTPTTKLNSAFENGNLS
Sbjct: 765 KYKQELQEALMQREHLQQEIEKEKAARSELEKTLRVHSSPLSDQTPTTKLNSAFENGNLS 824

Query: 836 RKVXXXXXXXXXXXXHFLQASLDSSDSYSERR---ELSMSPYYMKSMTPSSFEAALRQKE 892
           RK+            HFLQASLDSSDS SERR   ELSMSPYY+KSMTPSSFEAALRQKE
Sbjct: 825 RKLSSASSLGSLEESHFLQASLDSSDSISERRNIGELSMSPYYVKSMTPSSFEAALRQKE 884

Query: 893 GELASYMSRLASLESIRDSLADELVKLTAQCEKLRAEAAVLPGLRSELEALRRRHSAAXX 952
           GELASYMSRLASLESIRDSLADELVK+T QCEKLR EAAVLPGLRSELEALRRRHSAA  
Sbjct: 885 GELASYMSRLASLESIRDSLADELVKMTEQCEKLRGEAAVLPGLRSELEALRRRHSAALE 944

Query: 953 XXXXXXXXXXXXRADIVDLKEMYREQVNLLVNKIQVMGSSMGN 995
                       RADIVDLKEMYREQVNLLVNKIQ MG SMG+
Sbjct: 945 LMGERDEELEELRADIVDLKEMYREQVNLLVNKIQTMGPSMGS 987


>Glyma13g43330.1 
          Length = 884

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/648 (75%), Positives = 517/648 (79%), Gaps = 8/648 (1%)

Query: 356 VELDMKEQHLSSVGDMHDSDSA-VELDRVKRDMKMMEXXXXXXXXXXXXXXXXXXKLMNE 414
           V+ +  E+ +SSV     +DS+ +EL+RVKR++KMME                  KLMNE
Sbjct: 236 VQAEESEKRISSVQPKASTDSSMLELERVKREIKMMEAALQGAAKQAQAKADEIAKLMNE 295

Query: 415 NEQLKALIEDLKRKSNEAEVESLREEYHQRVTTLERRIYALTKERDTLRREQNKKSDAAA 474
           NEQLKA+IED KRKSNEAEVESLREEYHQRV TLER++YALTKERDTLRREQNKKSDAAA
Sbjct: 296 NEQLKAVIEDFKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSDAAA 355

Query: 475 LLKEKDEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQIEENKVES 534
           LLKEKDEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQ+EENKVES
Sbjct: 356 LLKEKDEIINQVMAEGEELSKKQAAQESTIRKLRAQIRDFEEEKKGLTTKLQVEENKVES 415

Query: 535 IKRDKTATEKLLQETIEKHQNELAAQKEYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 594
           IKRDKTATEKLLQETIEKHQNE+AAQKEYY                              
Sbjct: 416 IKRDKTATEKLLQETIEKHQNEIAAQKEYYTNALAAAKEAEALAEARANNEARTELESRL 475

Query: 595 XXXXXXXXMLVQTLEELRQTLSRKEQQAVFKEDMLHRDIEDLQKRYQASERRCEELITQV 654
                   MLVQ LEELRQTLSRKEQQAVFKEDML RDIEDLQKRYQASERRCEELITQV
Sbjct: 476 REAEERESMLVQALEELRQTLSRKEQQAVFKEDMLRRDIEDLQKRYQASERRCEELITQV 535

Query: 655 PESTRPLLRQIEAMQXXXXXXXXXXXXXXXSLNSRLQEAEAKAATSEERERSVNERLSQT 714
           PESTRPLLRQIEAMQ               +LNSRLQEAEAKAAT+EERERSVNERLSQT
Sbjct: 536 PESTRPLLRQIEAMQETNARKAEAWAAVERTLNSRLQEAEAKAATAEERERSVNERLSQT 595

Query: 715 LSRINVLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADTHEGRVRQLEEDI 774
           LSRINVLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADT EGRVRQLEE+I
Sbjct: 596 LSRINVLEAQISCLRAEQTQLSRTLEKERQRAAESRQEYLAAKEEADTQEGRVRQLEEEI 655

Query: 775 RDLRQKHKQELQEVLMHRELLQQEIEKEKAARADLERTARVHSA----QTPTTKLNSAFE 830
           RD+RQK+KQELQE LM RE LQQEIEKEKAAR++LE+T R  SA    QTPTTKLNSAFE
Sbjct: 656 RDIRQKYKQELQEALMQREHLQQEIEKEKAARSELEKTVRAQSAPLSDQTPTTKLNSAFE 715

Query: 831 NGNLSRKVXXXXXXXXXXXXHFLQASLDSSDSYSERR---ELSMSPYYMKSMTPSSFEAA 887
           NGNLSRK+            HFLQASLDSSD  SERR   EL+MSPYY+KSMTPSSFEAA
Sbjct: 716 NGNLSRKLSSASSLGSLEESHFLQASLDSSDGISERRNPGELNMSPYYVKSMTPSSFEAA 775

Query: 888 LRQKEGELASYMSRLASLESIRDSLADELVKLTAQCEKLRAEAAVLPGLRSELEALRRRH 947
           LRQKEGELASYMSRLASLESIRDSLADELVK+T QCEKLR EAAVLPGLRSELEALRRRH
Sbjct: 776 LRQKEGELASYMSRLASLESIRDSLADELVKMTEQCEKLRGEAAVLPGLRSELEALRRRH 835

Query: 948 SAAXXXXXXXXXXXXXXRADIVDLKEMYREQVNLLVNKIQVMGSSMGN 995
           SAA              RADIVDLKEMYREQVNLLVNKIQ MG SMG+
Sbjct: 836 SAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQTMGPSMGS 883



 Score =  239 bits (610), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/274 (54%), Positives = 174/274 (63%), Gaps = 26/274 (9%)

Query: 1   MAWFNNAKTSWGNFPDLAGAVNKLQESVKSIEKNFDTALGFEEKSESSNDGGNEASGLWP 60
           MAWF+  K +WGNFPDLAGAVNKLQESVK+IEKNFD+ALGFEEK ESSN    E +G WP
Sbjct: 1   MAWFS-GKNTWGNFPDLAGAVNKLQESVKNIEKNFDSALGFEEKGESSN----EDAGSWP 55

Query: 61  ASADTKNLFNPVMAFMGNKTEENSEETSDDVESSQKESEIDNSVEKGESPDHIPVAEGKX 120
             AD K LFNPV++FMGNK+EE +EE S+  ESSQ++SE++ S+E+ ES DH  VAEG  
Sbjct: 56  IPADRKTLFNPVISFMGNKSEETTEEMSEKDESSQQDSEMEKSLEQPESLDHTSVAEGSN 115

Query: 121 X-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEPADGTTTQNLDQEKDEDQLPEMPVEL 179
                                           TE  DGT  QNLD  K+E+ L E+PVEL
Sbjct: 116 ALETDNTVHMEAEENTTKEENKVLKEEEDGEHTESVDGTVAQNLDHGKEENHLLELPVEL 175

Query: 180 PESPVQKFESLDSVDGSQEKEIAEVGTSESPVSMQPMAPDLADDVVEGSTSEPGESHTIS 239
           PESPV+KFES DSV+ SQEKEIA+ GTS SPV                   E  ESH IS
Sbjct: 176 PESPVEKFESSDSVEHSQEKEIADPGTSGSPV-------------------ESDESHDIS 216

Query: 240 DVHENIQVETKDENTEET-VQIEESGDRFSSVQP 272
           D HEN QVETK+E+ EE  VQ EES  R SSVQP
Sbjct: 217 DGHENSQVETKEESKEEERVQAEESEKRISSVQP 250