Miyakogusa Predicted Gene

Lj3g3v0247260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0247260.1 Non Chatacterized Hit- tr|D8QWI2|D8QWI2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,54.79,0.000000000000001,Ribosomal_S17,Ribosomal protein
S17; no description,Nucleic acid-binding, OB-fold; Nucleic
acid-bind,CUFF.40389.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43360.1                                                       151   3e-37
Glyma15g01950.1                                                       147   4e-36

>Glyma13g43360.1 
          Length = 156

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 92/125 (73%), Gaps = 6/125 (4%)

Query: 1   MWLLQLPPKLSNPFI--HGTPFTPLSKPATALTHHTHSPPSFLPSIKAMKSIQGKVVCSA 58
           MWL+QL    S PF+  HG   T LSK ++A+T    +PPSFLP I AMK++QG+VVCS 
Sbjct: 16  MWLVQL----STPFLNGHGHSTTLLSKHSSAVTQTHWAPPSFLPQINAMKTMQGRVVCST 71

Query: 59  SDKTVAVEVVRLAPHPXXXXXXXXXXXXQAHDPENQFKVGDIVQLTKTRPISKTKAFLAL 118
           SDKTVAVEVVRLAPHP            QAHDP+NQFKVGDIVQL KTRPISKTKAFLAL
Sbjct: 72  SDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKAFLAL 131

Query: 119 PVPSR 123
           PVP R
Sbjct: 132 PVPKR 136


>Glyma15g01950.1 
          Length = 143

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 98/142 (69%), Gaps = 10/142 (7%)

Query: 1   MWLLQLPPKLSNPFI--HGTPFTPLSKPATALTHHTHSPPSFLPSIKAMKSIQGKVVCSA 58
           MWL+QL    S PF+  HG   + L KP++A+T    +PPS LP I AMK++QGKVVCS 
Sbjct: 1   MWLVQL----STPFLNGHGHGSSLLWKPSSAVTQTHWAPPSLLPQINAMKTMQGKVVCST 56

Query: 59  SDKTVAVEVVRLAPHPXXXXXXXXXXXXQAHDPENQFKVGDIVQLTKTRPISKTKAFLAL 118
           +DKTVAVEVVRLAPHP            QAHDP+NQF VGDIVQL KTRPISKTKAFLAL
Sbjct: 57  NDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFNVGDIVQLQKTRPISKTKAFLAL 116

Query: 119 PVPSRGAKNKPS---GDLPIPL 137
           PVP R + N+P     +L IP 
Sbjct: 117 PVPKRSS-NRPEPQPDELSIPF 137