Miyakogusa Predicted Gene
- Lj3g3v0201900.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0201900.2 tr|Q5VRY6|Q5VRY6_ORYSJ Os01g0183400 protein
OS=Oryza sativa subsp. japonica GN=P0489A01.12 PE=4
SV=1,38.4,0.00000000002,SUBFAMILY NOT NAMED,NULL; HISTONE-LIKE
TRANSCRIPTION FACTOR CCAAT-RELATED,NULL;
CBFD_NFYB_HMF,Transc,CUFF.40346.2
(134 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g37130.1 137 3e-33
Glyma18g01040.1 133 4e-32
Glyma13g25860.1 48 3e-06
Glyma15g36170.1 48 3e-06
Glyma13g25860.3 47 5e-06
Glyma13g25860.2 47 5e-06
Glyma06g46850.1 46 9e-06
Glyma04g37290.1 46 9e-06
Glyma06g17780.1 46 9e-06
Glyma04g37290.2 46 9e-06
>Glyma11g37130.1
Length = 168
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 83/117 (70%)
Query: 17 ELPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHL 76
E P+ RVKKIM +DK+V+RVSSEALFLVS ST+LFL+FLAE SA++AI+KKRKTVNLEH+
Sbjct: 14 EFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHI 73
Query: 77 RIAVKRHRPTSDFLLDSLPMPLPAHXXXXXXXXXXXXXXXXGVGSTRRIDHFFRKSD 133
R+AVKRH+PT DFLLD LP P A TR ID FFRK +
Sbjct: 74 RVAVKRHQPTRDFLLDELPPPSQAAKPDKPTQPAGRPKLDPAPRGTRCIDQFFRKPE 130
>Glyma18g01040.1
Length = 166
Score = 133 bits (335), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 82/117 (70%)
Query: 17 ELPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHL 76
E P+ RVKKIM +DK+V+RVSSEALFLVS ST+LFL+FLAE SA++AI+KKRKTVNLEH+
Sbjct: 14 EFPKGRVKKIMALDKDVKRVSSEALFLVSRSTELFLQFLAEKSAQVAIEKKRKTVNLEHI 73
Query: 77 RIAVKRHRPTSDFLLDSLPMPLPAHXXXXXXXXXXXXXXXXGVGSTRRIDHFFRKSD 133
R AVKRH+PT DFLLD LP P TRRID FFRK +
Sbjct: 74 REAVKRHQPTRDFLLDELPPPSQPTKPDRPTQPAGRPKLDPPPRGTRRIDLFFRKPE 130
>Glyma13g25860.1
Length = 287
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 18 LPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHLR 77
P R+KKIM D++V +++ LVS + +LFL+ L + + +I + + KT+N HL+
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLK 68
Query: 78 IAVKRHRPTSDFLLD 92
V+ + DFL D
Sbjct: 69 HCVQSYN-VFDFLRD 82
>Glyma15g36170.1
Length = 299
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 18 LPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHLR 77
P R+KKIM D++V +++ LVS + +LFL+ L + + +I + + KT+N HL+
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLK 68
Query: 78 IAVKRHRPTSDFLLD 92
V+ + DFL D
Sbjct: 69 HCVQSYN-VFDFLRD 82
>Glyma13g25860.3
Length = 141
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 18 LPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHLR 77
P R+KKIM D++V +++ LVS + +LFL+ L + + +I + + KT+N HL+
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLK 68
Query: 78 IAVKRHRPTSDFLLD 92
V+ + DFL D
Sbjct: 69 HCVQSYN-VFDFLRD 82
>Glyma13g25860.2
Length = 141
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 18 LPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHLR 77
P R+KKIM D++V +++ LVS + +LFL+ L + + +I + + KT+N HL+
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLK 68
Query: 78 IAVKRHRPTSDFLLD 92
V+ + DFL D
Sbjct: 69 HCVQSYN-VFDFLRD 82
>Glyma06g46850.1
Length = 292
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 18 LPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHLR 77
P R+KKIM D++V +++ LVS + +LFL+ L + + ++ + + KT+N HL+
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEVTLQRGAKTMNSLHLK 68
Query: 78 IAVKRHRPTSDFLLD 92
V+ + DFL D
Sbjct: 69 HCVQSYS-VFDFLRD 82
>Glyma04g37290.1
Length = 225
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 17 ELPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHL 76
+LP R+KKIM D++V+ +S+EA L + + +LF+ L S A + KR+T+ +
Sbjct: 67 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHADENKRRTLQKNDI 126
Query: 77 RIAVKRHRPTSDFLLDSLP 95
A+ R DFL+D +P
Sbjct: 127 AAAITRTD-IFDFLVDIVP 144
>Glyma06g17780.1
Length = 229
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 17 ELPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHL 76
+LP R+KKIM D++V+ +S+EA L + + +LF+ L S A + KR+T+ +
Sbjct: 71 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 130
Query: 77 RIAVKRHRPTSDFLLDSLP 95
A+ R DFL+D +P
Sbjct: 131 AAAITRTD-IFDFLVDIVP 148
>Glyma04g37290.2
Length = 222
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 17 ELPRVRVKKIMTVDKEVQRVSSEALFLVSLSTQLFLEFLAENSAKIAIDKKRKTVNLEHL 76
+LP R+KKIM D++V+ +S+EA L + + +LF+ L S A + KR+T+ +
Sbjct: 67 QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHADENKRRTLQKNDI 126
Query: 77 RIAVKRHRPTSDFLLDSLP 95
A+ R DFL+D +P
Sbjct: 127 AAAITRTD-IFDFLVDIVP 144