Miyakogusa Predicted Gene

Lj3g3v0180790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0180790.1 Non Chatacterized Hit- tr|B9FAR0|B9FAR0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,48.91,4e-18,seg,NULL; LEA_2,Late embryogenesis abundant protein,
LEA-14,CUFF.40342.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43610.1                                                       170   8e-43
Glyma09g32220.1                                                       130   8e-31
Glyma07g09580.1                                                        92   4e-19
Glyma08g22050.1                                                        75   4e-14
Glyma08g22060.1                                                        75   4e-14

>Glyma13g43610.1 
          Length = 150

 Score =  170 bits (431), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 88/150 (58%), Positives = 110/150 (73%)

Query: 26  TRRRQVTCTAGILLFLTTAYIFWPTDPDXXXXXXXXXXXXXHRFPRVTVDISMILTLMVS 85
           +RRR VT   G+L+ L+  YIFWP+ PD             H  P +T+DISM+LTL V 
Sbjct: 1   SRRRVVTLAVGVLILLSALYIFWPSGPDLKIVGLKLRRIKVHPVPPITIDISMLLTLRVH 60

Query: 86  NAGVYSIDFGAVDVVVAYRGKALGHVTSEHGHVSARGSSHVDADVEFEGIGVVPDMVMLL 145
           N  VY +DFGAV+V VAYRGK LGHVTS   HV ARGSS+VDADVEF GI V+P++V+LL
Sbjct: 61  NVDVYFMDFGAVNVAVAYRGKMLGHVTSRRMHVRARGSSYVDADVEFAGISVLPELVLLL 120

Query: 146 EDVAKGMVPFDTVSEVRGQMGLLFLHFPMQ 175
           EDVA+G+VPFDT+S  +GQ+GLLF HFP++
Sbjct: 121 EDVARGIVPFDTISHAKGQLGLLFFHFPIK 150


>Glyma09g32220.1 
          Length = 257

 Score =  130 bits (327), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 99/169 (58%), Gaps = 3/169 (1%)

Query: 31  VTCTAGILLFLT---TAYIFWPTDPDXXXXXXXXXXXXXHRFPRVTVDISMILTLMVSNA 87
           +  +A + LFL     A++ +P+DP+                PR  +D+S  LT+ V N 
Sbjct: 69  IIYSAALFLFLLVAGAAFLLYPSDPEIRLARIRLDRIGIRTNPRPILDLSFSLTVKVRNR 128

Query: 88  GVYSIDFGAVDVVVAYRGKALGHVTSEHGHVSARGSSHVDADVEFEGIGVVPDMVMLLED 147
             +S+ + ++ V V YRG+ LG VT+  G + ARGSS+VDA +  +G  V+ D   LLED
Sbjct: 129 DFFSLSYDSLTVSVGYRGRQLGFVTAGGGSIRARGSSYVDATLTIDGFEVIYDAFYLLED 188

Query: 148 VAKGMVPFDTVSEVRGQMGLLFLHFPMQAKQSCEILVSTLNHTIIRQHC 196
           +AKG++PFDT + V G++GL F   P++A  SCE+ V+    TI+RQ C
Sbjct: 189 IAKGVIPFDTDTRVEGKLGLFFFTVPLKATVSCEVDVNINQQTIVRQDC 237


>Glyma07g09580.1 
          Length = 130

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 90  YSIDFGAVDVVVAYRGKALGHVTSEHGHVSARG-SSHVDADVEFEGIGVVPDMVMLLEDV 148
           +S+ +  + V V YRG+ LG VT   G       SS+VDA +  +G  V+ D   LLED+
Sbjct: 3   FSLTYDTLAVSVGYRGRQLGFVTGGGGGRIRARGSSYVDATLTIDGFEVIYDAFYLLEDI 62

Query: 149 AKGMVPFDTVSEVRGQMGLLFLHFPMQAKQSCEILVSTLNHTIIRQHC 196
           AKG++PFDT + V G++GL F   P++A  SCE+ V+    TI+RQ C
Sbjct: 63  AKGVIPFDTDTRVEGKLGLFFFTVPLKATVSCEVYVNINQQTIVRQDC 110


>Glyma08g22050.1 
          Length = 174

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 4/129 (3%)

Query: 29  RQVTC---TAGILLFLTTAYIFWPTDPDXXXXXXXXXXXXXHRFPRVTVDISMILTLMVS 85
           R+  C   T  +++ L    + WP +P+             H  P V+ D+ + L++ V 
Sbjct: 13  RRFCCLKWTVFVVVSLAGVLVLWPWEPELKIERMNVKRVKVHPIPPVSADVWISLSVRVQ 72

Query: 86  NAGVYSIDFGAVDVVVAYRGKALGHVTSEHGHVSARGSSHVDADVEFEGIGVVPDMVMLL 145
           N  +Y ++   VDV V YRGK +GHV SE  HV    S+ VD  +EF G+    ++  LL
Sbjct: 73  NRCMYWMELTDVDVGVKYRGKKMGHVESEGWHVRGWASTKVDGVLEFSGLP-SSEVAHLL 131

Query: 146 EDVAKGMVP 154
           +D+A G+ P
Sbjct: 132 QDLAMGLRP 140


>Glyma08g22060.1 
          Length = 145

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 48  WPTDPDXXXXXXXXXXXXXHRFPRVTVDISMILTLMVSNAGVYSIDFGAVDVVVAYRGKA 107
           WP  P+                P V  D+S+ +++ V N  +Y ++   VDV + YR K 
Sbjct: 15  WPWYPELKIERMEVKRVKVRPVPPVGADVSISMSVRVRNRDIYWMEMREVDVGMKYRRKK 74

Query: 108 LGHVTSEHGHVSARGSSHVDADVEFEGI--GVVPDMVMLLEDVAKGMVPFDTVSEVRGQM 165
           +GHV  +   V    S+HV+A+V F  +    VP    LLEDVAKG V F TV E+ GQ 
Sbjct: 75  MGHVELKGWQVKGWSSTHVEAEVVFAELPSSQVP---YLLEDVAKGKVYFRTVVELSGQF 131

Query: 166 GLLFLHFPM 174
           G+L    P+
Sbjct: 132 GILSFRTPL 140