Miyakogusa Predicted Gene

Lj3g3v0139480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0139480.1 tr|A9TSB0|A9TSB0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96490
,38.96,4e-18,seg,NULL; OS01G0617700 PROTEIN,NULL; CENTROMERE PROTEIN
C,NULL,CUFF.40318.1
         (699 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43740.1                                                       553   e-157
Glyma15g01600.1                                                       332   9e-91
Glyma15g01600.2                                                       271   1e-72

>Glyma13g43740.1 
          Length = 749

 Score =  553 bits (1425), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 357/795 (44%), Positives = 433/795 (54%), Gaps = 166/795 (20%)

Query: 17  LDPLSNYRGLSLFPSTSS--ALPLSVADDLDAIHNHLRSM-------------------- 54
           +DPLSNY GLSLFP  S   + P +   DL  IH HLRSM                    
Sbjct: 9   VDPLSNYWGLSLFPQPSFPPSKPYNSDQDLHTIHTHLRSMVIIRVYFSFNCSITFHFMHI 68

Query: 55  ----ALRSPAKLVEQTKAILEENPGLFNSQDDERNXXXXXXXXXAEDGQDFPRKRRPGLG 110
               ALRSPAKL                + D E                +F R  RPGLG
Sbjct: 69  VLSQALRSPAKL---------------KTNDAE---------------GEFRRNPRPGLG 98

Query: 111 LKRARFSLKPSTSVSLES-------------------------LLPNLDIENLKDPVEFF 145
           LKR RFS+KP+  V  +                           L +L ++++   V  F
Sbjct: 99  LKRPRFSMKPTKKVCYQLWTLIASRIRRNSSWLMNGWKVSHCLFLISLPVDDIAIRVACF 158

Query: 146 KAHERMENARREIQKQMG-VSVEQNQDDVSTRPRQRRPGLRGNDQRSIKYRHRYSTEISD 204
                      EIQKQ+G  S E +QD+V+ RPRQRRPGL GN+Q  IKY+HRY  E SD
Sbjct: 159 YF------ILLEIQKQLGGASFESDQDNVAARPRQRRPGLLGNNQLPIKYKHRYPKETSD 212

Query: 205 KNDHAMASQEAFGSDSLDPDTEKIENGEACLTSLENEVTDSSATEGNKICEILDGLLRCN 264
                ++SQE  GS SL P TE  + GEA + S E EV DSS T+G ++ E+LDGLL C+
Sbjct: 213 D---VLSSQETLGSQSLAPVTENTDKGEASMASSEKEVIDSSGTKGIELDELLDGLLHCD 269

Query: 265 SEDLEGDGAMDLLQERLQIKPVVLEKVSVPDFPDNQPIDLKSLRGSLSKPRKALSNIDNL 324
           SEDLEGDGA+ LLQERLQIKP+ LEK SVPDFPD Q +DLKSL+G+ SKPRKALS+IDNL
Sbjct: 270 SEDLEGDGAITLLQERLQIKPIALEKFSVPDFPDKQMVDLKSLQGNKSKPRKALSDIDNL 329

Query: 325 LN----RRKNKTPLRQDAGSPAEQLASPTPPRSPFAPLSSLLNHISRLKPSVDPFSAHDI 380
           L         KTPL++    P +QLASPTPPRSPFA LS L  HIS+ K S+DPFSAH+I
Sbjct: 330 LKGMSMNMNKKTPLKKAVQCPVQQLASPTPPRSPFASLSLLQKHISQSKQSMDPFSAHEI 389

Query: 381 DHLSTTKYSPVHKMNQELNVVGSAKPSNELNDHITKDA---------------------V 419
           DHLS+  YSP H +N ELN+V SA PSNELN H+ +DA                     +
Sbjct: 390 DHLSSKNYSPTHMVNPELNLVRSANPSNELNAHMIEDAIAEEKSGKSSNKLNAPSIQDII 449

Query: 420 AIGETNAVPDTLRNCAS-------------------------------ASENSKEDNSGK 448
           A+G T+   DT+RN  S                                SE SKEDNSGK
Sbjct: 450 AVGGTSLAEDTVRNGTSTSRKSMVDNSREPRFDVNILSNEPHDINGTHTSEVSKEDNSGK 509

Query: 449 SSNKLDAPLIEDILAVSESCLIEDAVMNSTSTSQMPMEDNSMEPEFDANVDRNEPH---A 505
           SSN L+  LIEDI+AV  + L ED   N TST +  M DNS EP FD  +D NEPH    
Sbjct: 510 SSNNLNVSLIEDIIAVYGTSLAEDTTRNCTSTFKKSMVDNSREPRFDVTLDSNEPHFIPL 569

Query: 506 DMDVDNGGSGMGETVMDDTVAKPNIEILTENTDAFTASMPTDDTDIDVVNPLADQSSPGV 565
            +                     N+ ++T      T               LADQ +P  
Sbjct: 570 KIHWLRMCFSAKRLCRIRLTCSSNVPLMTLTLLWCT---------------LADQPNPAG 614

Query: 566 IQANSIDKRTTCTNEGSEQCLQEERDGSRAPVE-QKRVKSRSQKDTKSKRLAKRQSLAAA 624
            +ANS+DKR   +++  E CLQE+ DGS  PV  QKRVKS  QK +K+K+L+ R SLAAA
Sbjct: 615 YEANSVDKRARRSDDDPEHCLQEKTDGSMVPVNGQKRVKSLVQKVSKNKKLSNRHSLAAA 674

Query: 625 XXXXXXXXXXXXXXXXXPLEYWKGERLVYGRIHQSLVTVLGVKCMSPGSNGKPTMKVKSF 684
                            PLEYWKGERLVYGR+H+SL TV+GVKC+SPGS+GKP MKVKS+
Sbjct: 675 GTSWTSGLRRSTRIRTRPLEYWKGERLVYGRVHKSLATVIGVKCISPGSDGKPIMKVKSY 734

Query: 685 VQDKHKELFDLASRY 699
           V DKHKELF+LAS Y
Sbjct: 735 VSDKHKELFELASLY 749


>Glyma15g01600.1 
          Length = 425

 Score =  332 bits (851), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 212/489 (43%), Positives = 267/489 (54%), Gaps = 88/489 (17%)

Query: 235 LTSLENEVTDSSATEGNKICEILDGLLRCNSEDLEGDGAMDLLQERLQIKPVVLEKVSVP 294
           + SLE EV DSS TEGNK+ E+LDGLL CNSEDLEGDGAM LLQERLQIKP+ LEK SVP
Sbjct: 1   MASLEKEVIDSSGTEGNKLDELLDGLLHCNSEDLEGDGAMTLLQERLQIKPIALEKFSVP 60

Query: 295 DFPDNQPIDLKSLRGSLSKPRKALSNIDNLLN--RRKNKTPLRQDAGSPAEQLASPTPPR 352
           DFPD Q +DLKSL+G+ SKPRKALS+IDNLL       KTPL++    P +QLASPTPPR
Sbjct: 61  DFPDKQMVDLKSLQGNKSKPRKALSDIDNLLKGMNMNKKTPLKKAVQCPGQQLASPTPPR 120

Query: 353 SPFAPLSSLLNHISRLKPSVDPFSAHDIDHLSTTKYSPVHKMNQELNVVGSAKPSNELND 412
           SPFA LS L  HISR K SVDPFSAH+ID+LS+  YS  H +N ELN+ GS         
Sbjct: 121 SPFASLSLLQRHISRSKQSVDPFSAHEIDNLSSKNYSLTHTVNPELNLAGS--------- 171

Query: 413 HITKDAVAIGETNAVPDTLRNCASASENSKEDNSGKSSNKLDAPLIEDILAVSESCLIED 472
                                             G  SN+L+A +IED+ AV ++  + D
Sbjct: 172 ----------------------------------GNLSNELNAHMIEDVHAVGKTSTVLD 197

Query: 473 AVMNSTSTSQMPMEDNSMEPEFDANVDRNEPHADMDVDNGGSGMGETVMDDTVAKPNIEI 532
              N T+TS++P ED S +   +A+         M  D+   G   TV+D          
Sbjct: 198 TDRNGTNTSEIPKEDYSGKSNIEAH---------MIEDDIAVGKTSTVLD---------- 238

Query: 533 LTENTDAFTASMPTDDTDIDVVNPLADQSSPGVIQANSI----DKRTTCTNEG----SEQ 584
            T+     T+ +  +D      N L   S   ++ A+      D    CTN G    +++
Sbjct: 239 -TDINSIHTSEISKEDNSGKSSNNLNVPSIDNIVAADGTSLAEDAARNCTNVGVSGVADR 297

Query: 585 CLQEERDGSRAPVEQKRVKSRSQKDTKS-----KRLAKRQSLA---------AAXXXXXX 630
            + + +D S   V +   +S  +  T S       L    SL          AA      
Sbjct: 298 VMDDTKDRSNIEVNES-CQSEDKTFTASIPTDDTNLNVLNSLVHFTFSFQQLAAGTSWTS 356

Query: 631 XXXXXXXXXXXPLEYWKGERLVYGRIHQSLVTVLGVKCMSPGSNGKPTMKVKSFVQDKHK 690
                      PLEYWKGER VYGR+HQSL TV+GVKC+SPGS+GKP MKVKS+V +K+K
Sbjct: 357 GLRRSTRIRTRPLEYWKGERPVYGRVHQSLATVIGVKCISPGSDGKPIMKVKSYVSNKYK 416

Query: 691 ELFDLASRY 699
           ELF+LAS Y
Sbjct: 417 ELFELASLY 425


>Glyma15g01600.2 
          Length = 386

 Score =  271 bits (694), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 182/450 (40%), Positives = 234/450 (52%), Gaps = 88/450 (19%)

Query: 274 MDLLQERLQIKPVVLEKVSVPDFPDNQPIDLKSLRGSLSKPRKALSNIDNLLN--RRKNK 331
           M LLQERLQIKP+ LEK SVPDFPD Q +DLKSL+G+ SKPRKALS+IDNLL       K
Sbjct: 1   MTLLQERLQIKPIALEKFSVPDFPDKQMVDLKSLQGNKSKPRKALSDIDNLLKGMNMNKK 60

Query: 332 TPLRQDAGSPAEQLASPTPPRSPFAPLSSLLNHISRLKPSVDPFSAHDIDHLSTTKYSPV 391
           TPL++    P +QLASPTPPRSPFA LS L  HISR K SVDPFSAH+ID+LS+  YS  
Sbjct: 61  TPLKKAVQCPGQQLASPTPPRSPFASLSLLQRHISRSKQSVDPFSAHEIDNLSSKNYSLT 120

Query: 392 HKMNQELNVVGSAKPSNELNDHITKDAVAIGETNAVPDTLRNCASASENSKEDNSGKSSN 451
           H +N ELN+ GS                                           G  SN
Sbjct: 121 HTVNPELNLAGS-------------------------------------------GNLSN 137

Query: 452 KLDAPLIEDILAVSESCLIEDAVMNSTSTSQMPMEDNSMEPEFDANVDRNEPHADMDVDN 511
           +L+A +IED+ AV ++  + D   N T+TS++P ED S +   +A+         M  D+
Sbjct: 138 ELNAHMIEDVHAVGKTSTVLDTDRNGTNTSEIPKEDYSGKSNIEAH---------MIEDD 188

Query: 512 GGSGMGETVMDDTVAKPNIEILTENTDAFTASMPTDDTDIDVVNPLADQSSPGVIQANSI 571
              G   TV+D           T+     T+ +  +D      N L   S   ++ A+  
Sbjct: 189 IAVGKTSTVLD-----------TDINSIHTSEISKEDNSGKSSNNLNVPSIDNIVAADGT 237

Query: 572 ----DKRTTCTNEG----SEQCLQEERDGSRAPVEQKRVKSRSQKDTKS-----KRLAKR 618
               D    CTN G    +++ + + +D S   V +   +S  +  T S       L   
Sbjct: 238 SLAEDAARNCTNVGVSGVADRVMDDTKDRSNIEVNES-CQSEDKTFTASIPTDDTNLNVL 296

Query: 619 QSLA---------AAXXXXXXXXXXXXXXXXXPLEYWKGERLVYGRIHQSLVTVLGVKCM 669
            SL          AA                 PLEYWKGER VYGR+HQSL TV+GVKC+
Sbjct: 297 NSLVHFTFSFQQLAAGTSWTSGLRRSTRIRTRPLEYWKGERPVYGRVHQSLATVIGVKCI 356

Query: 670 SPGSNGKPTMKVKSFVQDKHKELFDLASRY 699
           SPGS+GKP MKVKS+V +K+KELF+LAS Y
Sbjct: 357 SPGSDGKPIMKVKSYVSNKYKELFELASLY 386