Miyakogusa Predicted Gene

Lj3g3v0126190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0126190.1 CUFF.40303.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g43590.1                                                        89   3e-18
Glyma07g18960.1                                                        87   5e-18
Glyma07g18970.1                                                        85   3e-17

>Glyma18g43590.1 
          Length = 106

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 1  MADSSRNVDVEELISYSDDLLKVLRD-PRDLNGLFHCLQHXXXXXXXXXXXXXXARSLLQ 59
          MA+  RN+DVE+LISYSDDL+KVL + PRDLN L H LQ               ARS L 
Sbjct: 1  MAEPWRNIDVEKLISYSDDLVKVLSEGPRDLNNLSHSLQQTRALSSSCDSDLNEARSFLH 60

Query: 60 DYQKKIDAYKRKIEEAGSETVADA 83
          DYQ K+DA K+KIEEA SET AD 
Sbjct: 61 DYQNKVDACKQKIEEARSETAADG 84


>Glyma07g18960.1 
          Length = 108

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 1  MADSSRNVDVEELISYSDDLLKVL-RDPRDLNGLFHCLQHXXXXXXXXXXXXXXARSLLQ 59
          MA+  RN+DVE+LISYSDDL+KVL + PRD N L H LQ                RS LQ
Sbjct: 1  MAEPWRNIDVEKLISYSDDLVKVLSQGPRDFNNLSHSLQQKLALSSSCDSDLDDVRSSLQ 60

Query: 60 DYQKKIDAYKRKIEEAGSETVADA 83
          DYQKK+D  K+KIEEA SET ADA
Sbjct: 61 DYQKKVDTCKQKIEEARSETAADA 84


>Glyma07g18970.1 
          Length = 92

 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 46/53 (86%)

Query: 109 IRDEFNDLEQQRMSIQEQKKALHKIEQDKLRTQMTLSMYASVTNIVPNLDDQS 161
           I +EFNDLEQQ +S+QEQKK L KIE++K RTQM LSMYASVTNIVPNLD+ S
Sbjct: 1   IGNEFNDLEQQWISVQEQKKTLQKIEKNKQRTQMVLSMYASVTNIVPNLDEHS 53