Miyakogusa Predicted Gene

Lj3g3v0116130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0116130.1 tr|A9RES0|A9RES0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65167
,34.12,2e-18,BAH,Bromo adjacent homology (BAH) domain;
seg,NULL,CUFF.40296.1
         (270 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43940.1                                                       216   2e-56
Glyma06g08530.1                                                       157   1e-38
Glyma14g20400.1                                                       104   1e-22

>Glyma13g43940.1 
          Length = 212

 Score =  216 bits (551), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 129/162 (79%), Gaps = 7/162 (4%)

Query: 12  LKDFKWGRKRGVGVKNKAIQFYESFVYEGVKYSLYDCAYFYDARHVETSIGKLVRMYEGP 71
           + DFKWG KRGVG KNK IQ+YESFVYEGV+Y LYDC Y Y A HVETSIGKLV+++E  
Sbjct: 1   MIDFKWGDKRGVGGKNKDIQYYESFVYEGVQYFLYDCVYLYTAGHVETSIGKLVKIFETR 60

Query: 72  SHNKMVKVVWFLRPGEIRNFMGHYRPSWD-------EGKGVSNLNYLGAIIGKCNVVCTS 124
           +  KM+K+VWF RP +IRN++G Y+P W+       EGKGVSN NYL +II KC+V+CTS
Sbjct: 61  NRQKMIKLVWFFRPFDIRNWLGQYKPCWNELFLASGEGKGVSNFNYLESIIRKCSVICTS 120

Query: 125 KDRRNPEPSDTDLKKADYFFDHTFDVGKLELVDKFADKIDGI 166
           KD+RNP+PS+ +LKKADYFF+ TFDV +  ++D+F ++IDGI
Sbjct: 121 KDKRNPKPSEIELKKADYFFNCTFDVVRGVIIDQFTNEIDGI 162


>Glyma06g08530.1 
          Length = 628

 Score =  157 bits (397), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 8/168 (4%)

Query: 14  DFKWGRKRGVGVKNKAIQFYESFVYEGVKYSLYDCAYFYDARHVETSIGKLVRMYEGPSH 73
           +FKWG ++G+G K K +QFYESF Y+GV+YSL+D  + Y     E  IGK+++++E    
Sbjct: 11  EFKWGTRKGLGGKKKDVQFYESFTYDGVEYSLFDSVFLYKEGEPEHYIGKILKIWENSDK 70

Query: 74  NKMVKVVWFLRPGEIRNFMGHYRP-------SWDEGKGVSNLNYLGAIIGKCNVVCTSKD 126
           +K VK++W+ RP EI NF+            +  EG+G+ N+N L AI GKCN+VC SKD
Sbjct: 71  SKKVKILWYFRPSEILNFLEGSETLENELFLASGEGEGLVNVNPLEAISGKCNIVCISKD 130

Query: 127 RRNPEPSDTDLKKADYFFDHTFDVGKLELVDKF-ADKIDGIEVEHFFN 173
            RNP PSD +++ A++ F   FDVG  +++DK   DKI GIEV++ FN
Sbjct: 131 IRNPYPSDEEVQMAEFVFYRFFDVGMRKILDKIVVDKIAGIEVKNIFN 178


>Glyma14g20400.1 
          Length = 189

 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 14/180 (7%)

Query: 7   QSGGDLKD-FKWGRKRGVGVKNKAIQFYESFVYEGVKYSLYDCAYFYDA-RHVETSIGKL 64
           +SG D +  F WG+KRG+G K K +QFYESF ++G +Y++ D           E  IG+L
Sbjct: 12  ESGLDFESPFAWGKKRGMGGKKKDVQFYESFSFDGAEYAINDTVCLQSGIGGGEPHIGRL 71

Query: 65  VRMYEGPSHNKMVKVVWFLRPGEIRNFMG--HYRPS-------WDEGKGVSNLNYLGAII 115
           ++++E    ++ VKV WF RP EI  ++     +P+        D  KG +N+N L AI+
Sbjct: 72  IKIWETRDKSRKVKVQWFFRPAEICKYLVGIEVKPNELFLACGGDGAKGFANVNPLEAIV 131

Query: 116 GKCNVVCTSKDRRNPEPSDTDLKKADYFFDHTFDVGKLELVDKFADKI-DGIEVEHFFNR 174
           GKCNVVC SKD  NP+PS     KADY +   FDV +L++VD+   K+  GIEV++  N+
Sbjct: 132 GKCNVVCISKDVGNPQPSGE--AKADYVYYRFFDVVQLKVVDQIDVKVAAGIEVKNVSNK 189