Miyakogusa Predicted Gene
- Lj3g3v0115940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0115940.1 Non Chatacterized Hit- tr|D8S5W6|D8S5W6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,44.74,2e-18,Q8LBW7_ARATH_Q8LBW7;,Cytochrome c oxidase, subunit
Vb; no description,Cytochrome c oxidase, subunit ,CUFF.40310.1
(152 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g43980.2 211 3e-55
Glyma15g01360.1 207 4e-54
Glyma08g22410.1 204 3e-53
Glyma13g43980.1 197 3e-51
Glyma07g03680.1 191 2e-49
Glyma07g03680.4 185 1e-47
Glyma07g03680.2 184 3e-47
Glyma15g01360.2 163 8e-41
Glyma08g22410.2 144 5e-35
Glyma07g03680.3 126 8e-30
>Glyma13g43980.2
Length = 153
Score = 211 bits (536), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/139 (76%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
Query: 1 MWRRLFTSPHLKSLSATLSHSPHPGSALRFAVAARYVATQSAGSIKKTVEDVVPIATGHE 60
MWRRLF+S +LK+L TLS S P A + +A + A A S+KK VEDVVPIATGHE
Sbjct: 1 MWRRLFSSSNLKALHTTLSPS-RPRLAAQTLLARHFTAQSGASSLKKRVEDVVPIATGHE 59
Query: 61 REEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHDVVWFWLE 120
REEIQADLEGRDILEINHP GPFGTKEAPAVV+SYFDRRIVGCPG EGE EHDVVWFWLE
Sbjct: 60 REEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEGEHDVVWFWLE 119
Query: 121 KGKPHECPVCAQYFVLEVV 139
KGKP ECPVC+QYF LEVV
Sbjct: 120 KGKPIECPVCSQYFKLEVV 138
>Glyma15g01360.1
Length = 152
Score = 207 bits (526), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 114/140 (81%), Gaps = 4/140 (2%)
Query: 1 MWRRLFTSPHLKSLSATLSHSPHPGSALRFAVAARYVATQS-AGSIKKTVEDVVPIATGH 59
MWRRLF+S +LKSL LS S L + R+V S A S+K+ VEDVVPIATGH
Sbjct: 1 MWRRLFSSSNLKSLHTALSPS---RPRLAAPLLTRHVTAHSGASSVKRRVEDVVPIATGH 57
Query: 60 EREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHDVVWFWL 119
EREEIQADLEGRDILEINHP GPFGTKEAPAVV+SYFDRRIVGCPG EGEDEHDVVWFWL
Sbjct: 58 EREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWL 117
Query: 120 EKGKPHECPVCAQYFVLEVV 139
EKGKP ECPVC+QYF LEVV
Sbjct: 118 EKGKPKECPVCSQYFKLEVV 137
>Glyma08g22410.1
Length = 160
Score = 204 bits (519), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/146 (71%), Positives = 120/146 (82%), Gaps = 8/146 (5%)
Query: 1 MWRRLFTSPHLKSLSATLSHSP-----HPGSALRFAVAARYVATQS--AGSIKKTVEDVV 53
M RRL +S HLK+L+AT S S + ++RY +TQS A +IKK VEDV+
Sbjct: 1 MLRRLLSS-HLKTLAATASSSTPRSASAAARFAALSRSSRYFSTQSEDATAIKKKVEDVM 59
Query: 54 PIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHD 113
PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEGEDEHD
Sbjct: 60 PIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHD 119
Query: 114 VVWFWLEKGKPHECPVCAQYFVLEVV 139
VVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 120 VVWFWLEKDKPHECPVCAQYFVLEVV 145
>Glyma13g43980.1
Length = 179
Score = 197 bits (502), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 114/164 (69%), Gaps = 25/164 (15%)
Query: 1 MWRRLFTSPHLKSLSATLS-------------------------HSPHPGSALRFAVAAR 35
MWRRLF+S +LK+L TLS H P+ + +
Sbjct: 1 MWRRLFSSSNLKALHTTLSPSRPRLAAQTLLARHFTAQSGFPSLHFPYILNCSFLNSISF 60
Query: 36 YVATQSAGSIKKTVEDVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSY 95
++ A S+KK VEDVVPIATGHEREEIQADLEGRDILEINHP GPFGTKEAPAVV+SY
Sbjct: 61 LLSQSGASSLKKRVEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSY 120
Query: 96 FDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAQYFVLEVV 139
FDRRIVGCPG EGE EHDVVWFWLEKGKP ECPVC+QYF LEVV
Sbjct: 121 FDRRIVGCPGDEGEGEHDVVWFWLEKGKPIECPVCSQYFKLEVV 164
>Glyma07g03680.1
Length = 163
Score = 191 bits (485), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/149 (66%), Positives = 118/149 (79%), Gaps = 11/149 (7%)
Query: 1 MWRRLFTSPHLKSLSATLSHSPHPGSALRFAV--------AARYVATQS--AGSIKKTVE 50
M RRL +S HLK+L+++ + + A + Y +TQS A +IKK VE
Sbjct: 1 MLRRLLSS-HLKTLASSAAAAATATPRSASASARFAALSRSCLYFSTQSEDATAIKKKVE 59
Query: 51 DVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGED 110
D++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEGED
Sbjct: 60 DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 119
Query: 111 EHDVVWFWLEKGKPHECPVCAQYFVLEVV 139
EHDVVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 120 EHDVVWFWLEKDKPHECPVCAQYFVLEVV 148
>Glyma07g03680.4
Length = 147
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 115/146 (78%), Gaps = 11/146 (7%)
Query: 1 MWRRLFTSPHLKSLSATLSHSPHPGSALRFAV--------AARYVATQS--AGSIKKTVE 50
M RRL +S HLK+L+++ + + A + Y +TQS A +IKK VE
Sbjct: 1 MLRRLLSS-HLKTLASSAAAAATATPRSASASARFAALSRSCLYFSTQSEDATAIKKKVE 59
Query: 51 DVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGED 110
D++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEGED
Sbjct: 60 DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 119
Query: 111 EHDVVWFWLEKGKPHECPVCAQYFVL 136
EHDVVWFWLEK KPHECPVCAQYFV+
Sbjct: 120 EHDVVWFWLEKDKPHECPVCAQYFVV 145
>Glyma07g03680.2
Length = 162
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 117/149 (78%), Gaps = 12/149 (8%)
Query: 1 MWRRLFTSPHLKSLSATLSHSPHPGSALRFAV--------AARYVATQS--AGSIKKTVE 50
M RRL +S HLK+L+++ + + A + Y +TQS A +IKK VE
Sbjct: 1 MLRRLLSS-HLKTLASSAAAAATATPRSASASARFAALSRSCLYFSTQSEDATAIKKKVE 59
Query: 51 DVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGED 110
D++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGE ED
Sbjct: 60 DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGE-ED 118
Query: 111 EHDVVWFWLEKGKPHECPVCAQYFVLEVV 139
EHDVVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 119 EHDVVWFWLEKDKPHECPVCAQYFVLEVV 147
>Glyma15g01360.2
Length = 135
Score = 163 bits (412), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 98/140 (70%), Gaps = 21/140 (15%)
Query: 1 MWRRLFTSPHLKSLSATLSHSPHPGSALRFAVAARYVATQS-AGSIKKTVEDVVPIATGH 59
MWRRLF+S +LKSL LS S L + R+V S A S+K+ VEDVVPIATGH
Sbjct: 1 MWRRLFSSSNLKSLHTALSPS---RPRLAAPLLTRHVTAHSGASSVKRRVEDVVPIATGH 57
Query: 60 EREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHDVVWFWL 119
EREEIQADLE EAPAVV+SYFDRRIVGCPG EGEDEHDVVWFWL
Sbjct: 58 EREEIQADLE-----------------EAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWL 100
Query: 120 EKGKPHECPVCAQYFVLEVV 139
EKGKP ECPVC+QYF LEVV
Sbjct: 101 EKGKPKECPVCSQYFKLEVV 120
>Glyma08g22410.2
Length = 124
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 94/124 (75%), Gaps = 8/124 (6%)
Query: 1 MWRRLFTSPHLKSLSATLSHSP-----HPGSALRFAVAARYVATQS--AGSIKKTVEDVV 53
M RRL +S HLK+L+AT S S + ++RY +TQS A +IKK VEDV+
Sbjct: 1 MLRRLLSS-HLKTLAATASSSTPRSASAAARFAALSRSSRYFSTQSEDATAIKKKVEDVM 59
Query: 54 PIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHD 113
PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEG + +
Sbjct: 60 PIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGGEYQN 119
Query: 114 VVWF 117
+ F
Sbjct: 120 IPCF 123
>Glyma07g03680.3
Length = 148
Score = 126 bits (317), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 70/75 (93%), Gaps = 2/75 (2%)
Query: 36 YVATQS--AGSIKKTVEDVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVR 93
Y +TQS A +IKK VED++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+
Sbjct: 43 YFSTQSEDATAIKKKVEDIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVK 102
Query: 94 SYFDRRIVGCPGGEG 108
SY+D+RIVGCPGGEG
Sbjct: 103 SYYDKRIVGCPGGEG 117