Miyakogusa Predicted Gene

Lj3g3v0115940.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0115940.1 Non Chatacterized Hit- tr|D8S5W6|D8S5W6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,44.74,2e-18,Q8LBW7_ARATH_Q8LBW7;,Cytochrome c oxidase, subunit
Vb; no description,Cytochrome c oxidase, subunit ,CUFF.40310.1
         (152 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43980.2                                                       211   3e-55
Glyma15g01360.1                                                       207   4e-54
Glyma08g22410.1                                                       204   3e-53
Glyma13g43980.1                                                       197   3e-51
Glyma07g03680.1                                                       191   2e-49
Glyma07g03680.4                                                       185   1e-47
Glyma07g03680.2                                                       184   3e-47
Glyma15g01360.2                                                       163   8e-41
Glyma08g22410.2                                                       144   5e-35
Glyma07g03680.3                                                       126   8e-30

>Glyma13g43980.2 
          Length = 153

 Score =  211 bits (536), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/139 (76%), Positives = 115/139 (82%), Gaps = 1/139 (0%)

Query: 1   MWRRLFTSPHLKSLSATLSHSPHPGSALRFAVAARYVATQSAGSIKKTVEDVVPIATGHE 60
           MWRRLF+S +LK+L  TLS S  P  A +  +A  + A   A S+KK VEDVVPIATGHE
Sbjct: 1   MWRRLFSSSNLKALHTTLSPS-RPRLAAQTLLARHFTAQSGASSLKKRVEDVVPIATGHE 59

Query: 61  REEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHDVVWFWLE 120
           REEIQADLEGRDILEINHP GPFGTKEAPAVV+SYFDRRIVGCPG EGE EHDVVWFWLE
Sbjct: 60  REEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEGEHDVVWFWLE 119

Query: 121 KGKPHECPVCAQYFVLEVV 139
           KGKP ECPVC+QYF LEVV
Sbjct: 120 KGKPIECPVCSQYFKLEVV 138


>Glyma15g01360.1 
          Length = 152

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 106/140 (75%), Positives = 114/140 (81%), Gaps = 4/140 (2%)

Query: 1   MWRRLFTSPHLKSLSATLSHSPHPGSALRFAVAARYVATQS-AGSIKKTVEDVVPIATGH 59
           MWRRLF+S +LKSL   LS S      L   +  R+V   S A S+K+ VEDVVPIATGH
Sbjct: 1   MWRRLFSSSNLKSLHTALSPS---RPRLAAPLLTRHVTAHSGASSVKRRVEDVVPIATGH 57

Query: 60  EREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHDVVWFWL 119
           EREEIQADLEGRDILEINHP GPFGTKEAPAVV+SYFDRRIVGCPG EGEDEHDVVWFWL
Sbjct: 58  EREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWL 117

Query: 120 EKGKPHECPVCAQYFVLEVV 139
           EKGKP ECPVC+QYF LEVV
Sbjct: 118 EKGKPKECPVCSQYFKLEVV 137


>Glyma08g22410.1 
          Length = 160

 Score =  204 bits (519), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 104/146 (71%), Positives = 120/146 (82%), Gaps = 8/146 (5%)

Query: 1   MWRRLFTSPHLKSLSATLSHSP-----HPGSALRFAVAARYVATQS--AGSIKKTVEDVV 53
           M RRL +S HLK+L+AT S S              + ++RY +TQS  A +IKK VEDV+
Sbjct: 1   MLRRLLSS-HLKTLAATASSSTPRSASAAARFAALSRSSRYFSTQSEDATAIKKKVEDVM 59

Query: 54  PIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHD 113
           PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEGEDEHD
Sbjct: 60  PIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHD 119

Query: 114 VVWFWLEKGKPHECPVCAQYFVLEVV 139
           VVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 120 VVWFWLEKDKPHECPVCAQYFVLEVV 145


>Glyma13g43980.1 
          Length = 179

 Score =  197 bits (502), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 103/164 (62%), Positives = 114/164 (69%), Gaps = 25/164 (15%)

Query: 1   MWRRLFTSPHLKSLSATLS-------------------------HSPHPGSALRFAVAAR 35
           MWRRLF+S +LK+L  TLS                         H P+  +       + 
Sbjct: 1   MWRRLFSSSNLKALHTTLSPSRPRLAAQTLLARHFTAQSGFPSLHFPYILNCSFLNSISF 60

Query: 36  YVATQSAGSIKKTVEDVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSY 95
            ++   A S+KK VEDVVPIATGHEREEIQADLEGRDILEINHP GPFGTKEAPAVV+SY
Sbjct: 61  LLSQSGASSLKKRVEDVVPIATGHEREEIQADLEGRDILEINHPVGPFGTKEAPAVVKSY 120

Query: 96  FDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCAQYFVLEVV 139
           FDRRIVGCPG EGE EHDVVWFWLEKGKP ECPVC+QYF LEVV
Sbjct: 121 FDRRIVGCPGDEGEGEHDVVWFWLEKGKPIECPVCSQYFKLEVV 164


>Glyma07g03680.1 
          Length = 163

 Score =  191 bits (485), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/149 (66%), Positives = 118/149 (79%), Gaps = 11/149 (7%)

Query: 1   MWRRLFTSPHLKSLSATLSHSPHPGSALRFAV--------AARYVATQS--AGSIKKTVE 50
           M RRL +S HLK+L+++ + +         A         +  Y +TQS  A +IKK VE
Sbjct: 1   MLRRLLSS-HLKTLASSAAAAATATPRSASASARFAALSRSCLYFSTQSEDATAIKKKVE 59

Query: 51  DVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGED 110
           D++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEGED
Sbjct: 60  DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 119

Query: 111 EHDVVWFWLEKGKPHECPVCAQYFVLEVV 139
           EHDVVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 120 EHDVVWFWLEKDKPHECPVCAQYFVLEVV 148


>Glyma07g03680.4 
          Length = 147

 Score =  185 bits (470), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/146 (65%), Positives = 115/146 (78%), Gaps = 11/146 (7%)

Query: 1   MWRRLFTSPHLKSLSATLSHSPHPGSALRFAV--------AARYVATQS--AGSIKKTVE 50
           M RRL +S HLK+L+++ + +         A         +  Y +TQS  A +IKK VE
Sbjct: 1   MLRRLLSS-HLKTLASSAAAAATATPRSASASARFAALSRSCLYFSTQSEDATAIKKKVE 59

Query: 51  DVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGED 110
           D++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEGED
Sbjct: 60  DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGED 119

Query: 111 EHDVVWFWLEKGKPHECPVCAQYFVL 136
           EHDVVWFWLEK KPHECPVCAQYFV+
Sbjct: 120 EHDVVWFWLEKDKPHECPVCAQYFVV 145


>Glyma07g03680.2 
          Length = 162

 Score =  184 bits (468), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 98/149 (65%), Positives = 117/149 (78%), Gaps = 12/149 (8%)

Query: 1   MWRRLFTSPHLKSLSATLSHSPHPGSALRFAV--------AARYVATQS--AGSIKKTVE 50
           M RRL +S HLK+L+++ + +         A         +  Y +TQS  A +IKK VE
Sbjct: 1   MLRRLLSS-HLKTLASSAAAAATATPRSASASARFAALSRSCLYFSTQSEDATAIKKKVE 59

Query: 51  DVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGED 110
           D++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGE ED
Sbjct: 60  DIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGE-ED 118

Query: 111 EHDVVWFWLEKGKPHECPVCAQYFVLEVV 139
           EHDVVWFWLEK KPHECPVCAQYFVLEVV
Sbjct: 119 EHDVVWFWLEKDKPHECPVCAQYFVLEVV 147


>Glyma15g01360.2 
          Length = 135

 Score =  163 bits (412), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 90/140 (64%), Positives = 98/140 (70%), Gaps = 21/140 (15%)

Query: 1   MWRRLFTSPHLKSLSATLSHSPHPGSALRFAVAARYVATQS-AGSIKKTVEDVVPIATGH 59
           MWRRLF+S +LKSL   LS S      L   +  R+V   S A S+K+ VEDVVPIATGH
Sbjct: 1   MWRRLFSSSNLKSLHTALSPS---RPRLAAPLLTRHVTAHSGASSVKRRVEDVVPIATGH 57

Query: 60  EREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHDVVWFWL 119
           EREEIQADLE                 EAPAVV+SYFDRRIVGCPG EGEDEHDVVWFWL
Sbjct: 58  EREEIQADLE-----------------EAPAVVKSYFDRRIVGCPGDEGEDEHDVVWFWL 100

Query: 120 EKGKPHECPVCAQYFVLEVV 139
           EKGKP ECPVC+QYF LEVV
Sbjct: 101 EKGKPKECPVCSQYFKLEVV 120


>Glyma08g22410.2 
          Length = 124

 Score =  144 bits (362), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 94/124 (75%), Gaps = 8/124 (6%)

Query: 1   MWRRLFTSPHLKSLSATLSHSP-----HPGSALRFAVAARYVATQS--AGSIKKTVEDVV 53
           M RRL +S HLK+L+AT S S              + ++RY +TQS  A +IKK VEDV+
Sbjct: 1   MLRRLLSS-HLKTLAATASSSTPRSASAAARFAALSRSSRYFSTQSEDATAIKKKVEDVM 59

Query: 54  PIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVRSYFDRRIVGCPGGEGEDEHD 113
           PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+SY+D+RIVGCPGGEG +  +
Sbjct: 60  PIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGGEYQN 119

Query: 114 VVWF 117
           +  F
Sbjct: 120 IPCF 123


>Glyma07g03680.3 
          Length = 148

 Score =  126 bits (317), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 59/75 (78%), Positives = 70/75 (93%), Gaps = 2/75 (2%)

Query: 36  YVATQS--AGSIKKTVEDVVPIATGHEREEIQADLEGRDILEINHPEGPFGTKEAPAVVR 93
           Y +TQS  A +IKK VED++PIATGHEREE+QA+LEGR+ILEI+HPEGPFGTKEAPAVV+
Sbjct: 43  YFSTQSEDATAIKKKVEDIMPIATGHEREELQAELEGRNILEIDHPEGPFGTKEAPAVVK 102

Query: 94  SYFDRRIVGCPGGEG 108
           SY+D+RIVGCPGGEG
Sbjct: 103 SYYDKRIVGCPGGEG 117