Miyakogusa Predicted Gene

Lj3g3v0095850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0095850.1 tr|E6NU95|E6NU95_9ROSI JHL06B08.6 protein
OS=Jatropha curcas GN=JHL06B08.6 PE=4 SV=1,93.91,0,domain present in
cyclins, TFIIB and Retinob,Cyclin-like; TFIIB,Transcription factor
TFIIB, conserve,CUFF.40277.1
         (312 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g15700.1                                                       589   e-168
Glyma02g32370.1                                                       584   e-167
Glyma03g29070.1                                                       573   e-164
Glyma19g31830.1                                                       521   e-148
Glyma05g06200.1                                                       117   2e-26
Glyma08g26850.1                                                       108   5e-24
Glyma11g07140.1                                                        92   7e-19
Glyma01g38090.1                                                        91   1e-18
Glyma05g06330.1                                                        82   9e-16

>Glyma10g15700.1 
          Length = 313

 Score =  589 bits (1518), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 286/313 (91%), Positives = 290/313 (92%), Gaps = 1/313 (0%)

Query: 1   MPDTFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANEAGDNDPVRVG 60
           M D FCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANE+GDNDP RVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 61  GPSNPLLTDGGLSTVIAKTNGSSG-EFLSASLGRWQNRGSNPDRGLIMAFKTIATMSDRL 119
           GPSNPLLTDGGLSTVIAK NG  G EFLS+SLGRWQNRGSNPDR LI AFKTIATMSDRL
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRL 120

Query: 120 GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 179
           GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT
Sbjct: 121 GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 180

Query: 180 KKEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEE 239
           KKEIGRAKEYIVKQLGLENG +VEMGTIHAGDFMRRFCSNL MNN            SEE
Sbjct: 181 KKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVQKSEE 240

Query: 240 FDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNW 299
           FDIRRSPISIAAAVIYIITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYPHVSKIIPNW
Sbjct: 241 FDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNW 300

Query: 300 YAKEEDLKNLCSP 312
           YAKEEDLKNLCSP
Sbjct: 301 YAKEEDLKNLCSP 313


>Glyma02g32370.1 
          Length = 314

 Score =  584 bits (1505), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 286/314 (91%), Positives = 291/314 (92%), Gaps = 2/314 (0%)

Query: 1   MPDTFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANEAGDNDPVRVG 60
           M D FCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANE+GDNDP RVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 61  GPSNPLLTDGGLSTVIAKTNGSSG--EFLSASLGRWQNRGSNPDRGLIMAFKTIATMSDR 118
           GPSNPLLTDGGLSTVIAK NG  G  EFLS+SLGRWQNRGSNPDR LI+AFKTIATMSDR
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGGGGGGEFLSSSLGRWQNRGSNPDRALIIAFKTIATMSDR 120

Query: 119 LGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178
           LGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA
Sbjct: 121 LGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 180

Query: 179 TKKEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSE 238
           TKKEIGRAKEYIVKQLGLENG +VEMGTIHAGDFMRRFCSNL MNN            SE
Sbjct: 181 TKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVHKSE 240

Query: 239 EFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPN 298
           EFDIRRSPISIAAAVIYIITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYPHVSKIIPN
Sbjct: 241 EFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPN 300

Query: 299 WYAKEEDLKNLCSP 312
           WYAKEEDLKNLCSP
Sbjct: 301 WYAKEEDLKNLCSP 314


>Glyma03g29070.1 
          Length = 306

 Score =  573 bits (1478), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 279/312 (89%), Positives = 287/312 (91%), Gaps = 6/312 (1%)

Query: 1   MPDTFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANEAGDNDPVRVG 60
           M +TFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1   MSETFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLTDGGLSTVIAKTNGSSGEFLSASLGRWQNRGSNPDRGLIMAFKTIATMSDRLG 120
           GP+NPLLTDGGLSTVIAK NG SGEFLS+S+GRWQNRG      LI+AFKTIATMSDRLG
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGGSGEFLSSSVGRWQNRG------LIVAFKTIATMSDRLG 114

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 115 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 174

Query: 181 KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEEF 240
           KEIGRAKEYIVKQLGLE GQSVE+GTIHAGDFMRRFCSNLGM N            SEEF
Sbjct: 175 KEIGRAKEYIVKQLGLEQGQSVEIGTIHAGDFMRRFCSNLGMTNQAVKAAQEAVQKSEEF 234

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY 300
           DIRRSPISIAAAVIYIITQLSDDKKP KDISVATGVAEGTIRNSYKDLYPHVSKIIP+WY
Sbjct: 235 DIRRSPISIAAAVIYIITQLSDDKKPPKDISVATGVAEGTIRNSYKDLYPHVSKIIPSWY 294

Query: 301 AKEEDLKNLCSP 312
           AKEEDLKNL SP
Sbjct: 295 AKEEDLKNLSSP 306


>Glyma19g31830.1 
          Length = 282

 Score =  521 bits (1342), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 258/312 (82%), Positives = 263/312 (84%), Gaps = 30/312 (9%)

Query: 1   MPDTFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANEAGDNDPVRVG 60
           M D FCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLTDGGLSTVIAKTNGSSGEFLSASLGRWQNRGSNPDRGLIMAFKTIATMSDRLG 120
           GP+NPLLTDGGLSTVIAK +G S EFLS                              LG
Sbjct: 61  GPTNPLLTDGGLSTVIAKPSGGSSEFLS------------------------------LG 90

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 91  LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 150

Query: 181 KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEEF 240
           KEIGRAKEYIVKQLGLE GQSVEMGTIHAGDFMRRFCSNLGM N            SEEF
Sbjct: 151 KEIGRAKEYIVKQLGLEQGQSVEMGTIHAGDFMRRFCSNLGMTNQAVKAAQEAVQKSEEF 210

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIP+WY
Sbjct: 211 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPSWY 270

Query: 301 AKEEDLKNLCSP 312
           AKE+DLKNLCSP
Sbjct: 271 AKEDDLKNLCSP 282


>Glyma05g06200.1 
          Length = 268

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 123/239 (51%), Gaps = 31/239 (12%)

Query: 5   FCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSI-DETSEWRTFANEAGDNDP---VRVG 60
           +CSDCK  T +V+DH+AGDT+CSECGLVLES SI +E  + R + ++  D+D      V 
Sbjct: 7   YCSDCKSYTPLVYDHNAGDTICSECGLVLESRSIEEEIPKLRLYGDKHEDDDDGGGFSVS 66

Query: 61  GPSNPLL--TDGGLSTVIAKTNGSSGEFLSASLGRWQNRG---SNPDR--------GLIM 107
            P N LL  +  GLST++   +            R   RG   SN D          L+ 
Sbjct: 67  DPFNTLLLTSGAGLSTLVTHPSLYDNNNSDMVKTRKNQRGIKNSNRDAKRKLKTDCDLVA 126

Query: 108 AFKTIATMSDRLGLVATIKDRANEIYKRVED--QKSSRGRNQDALLAACLYIACRQEDKP 165
           A  T+  M++ LGL  +IK+ A E+YK+ ED      R R+  A + ACLY+AC++E  P
Sbjct: 127 ALLTMEQMANNLGLAWSIKNHAKELYKKAEDRRVFRGRRRHSRASMVACLYLACQEEGFP 186

Query: 166 RTVKEICSVANGATKKEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNN 224
           +  KE     N    K IG  K++       +  Q +++G         R C++LG++N
Sbjct: 187 KDSKE----KNKHIYKAIGVFKKHFQVGRNYDKTQVLDIG--------ERLCTHLGLDN 233


>Glyma08g26850.1 
          Length = 207

 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 115/262 (43%), Gaps = 78/262 (29%)

Query: 13  TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANEAGDNDPVRVGGPSNPLLTDG-G 71
           T +V+DHSAGDT+CSECG +L+                            S PLLT G G
Sbjct: 13  TPLVYDHSAGDTICSECGFILD---------------------------LSAPLLTSGAG 45

Query: 72  LSTVIAKTNGSSGEFLSASLGRWQNRGSNPDRGLIMAFKTIATMSDRLGLVATIKDRANE 131
           LST +A T  +S                                      V +IK+ A E
Sbjct: 46  LSTSVAHTPSNS-------------------------------------FVWSIKNHAKE 68

Query: 132 IYKRVEDQKSSRGRNQD-ALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYI 190
           +YK+ + +K  + R    A + ACLY+AC++E  PRTVKEI SVA+GA +K+I +A    
Sbjct: 69  LYKKAQGRKIFKWRRHSRASMMACLYLACQEEGFPRTVKEIQSVADGAKEKQINKAIGVF 128

Query: 191 VKQLGL----ENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXXXXXXXSEEFDIRRSP 246
            K L +    +  Q++++G          FCS  G+ N            + EF +RR P
Sbjct: 129 NKHLQVGKNYDKAQALDIGEC--------FCSEFGLANHVIKAVREVLHKAHEFYVRRKP 180

Query: 247 ISIAAAVIYIITQLSDDKKPLK 268
             I A  I ++ QLS   K  +
Sbjct: 181 SIILATTIDMVDQLSSKNKIFQ 202


>Glyma11g07140.1 
          Length = 466

 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 7/197 (3%)

Query: 106 IMAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKP 165
           + A+  I  ++  LGL   I D A ++++        R R+ +AL  A L  A R+  +P
Sbjct: 137 LRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEP 196

Query: 166 RTVKEICSVANGATKKEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNX 225
           RT++EI S+A    +KEIG+  + + + L L    +    ++H    M RFC+ L +N  
Sbjct: 197 RTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH----MPRFCTLLQLNKS 251

Query: 226 XXXXXXX--XXXXSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRN 283
                        ++ F  RR+PISI+AA IY+  QL D +K   +I   TG+ E T+R 
Sbjct: 252 AQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 311

Query: 284 SYKDLYPHVSKIIPNWY 300
            YK+L  +   ++P+ Y
Sbjct: 312 VYKELLENWDDLLPSNY 328


>Glyma01g38090.1 
          Length = 503

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 7/197 (3%)

Query: 106 IMAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKP 165
           + A+  I  ++  LGL   I D A ++++        R R+ ++L  A L  A R+  +P
Sbjct: 136 LRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVESLATAALVQAIREAQEP 195

Query: 166 RTVKEICSVANGATKKEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNX 225
           RT++EI S+A    +KEIG+  + + + L L    +    ++H    M RFC+ L +N  
Sbjct: 196 RTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH----MPRFCTLLQLNKS 250

Query: 226 XXXXXXX--XXXXSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRN 283
                        ++ F  RR+PISI+AA IY+  QL D +K   +I   TG+ E T+R 
Sbjct: 251 AQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRK 310

Query: 284 SYKDLYPHVSKIIPNWY 300
            YK+L  +   ++P+ Y
Sbjct: 311 VYKELLENWDDLLPSNY 327


>Glyma05g06330.1 
          Length = 257

 Score = 81.6 bits (200), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 115/265 (43%), Gaps = 45/265 (16%)

Query: 29  CGLVLESHSIDE-TSEWRTFANEA---------------GDNDPVRVGGPSNPLLTDGG- 71
           CGLVLES SI+E   + R + ++                       V  P NPLL   G 
Sbjct: 1   CGLVLESRSIEEEIPKLRLYGDKLEDDDDGGGDHEDEDEHQEQVFSVSDPFNPLLLTSGA 60

Query: 72  -LSTVIAKT----NGSSGEFLSA-------SLGRWQNRGSNPDRGLIMAFKTIATMSDRL 119
            L+T++       N +S    +        +  R   R    D  L+ A  T+  M++ L
Sbjct: 61  DLTTLVTHPSLYDNNNSDMVKTCKNQRGIKNSNRAAKRKLKRDCDLVAALLTMEQMANNL 120

Query: 120 GLVATIKDRANEIYKRVED--QKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVA-- 175
           GL  +I++ A E+YK+ ED      R R+  A + ACLY+ C++E  P T+KEI SV+  
Sbjct: 121 GLARSIQNHAKELYKKAEDRRVFRGRRRHSRASMVACLYLVCQEEGFPMTLKEIQSVSGE 180

Query: 176 ----NGATKKEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNXXXXXXX 231
               N    K IG  K++       +  Q++++G         R C++LG+ N       
Sbjct: 181 AKEKNKHINKAIGVFKKHFQVGRNYDKTQALDLG--------ERLCTDLGLGNHVIKAVR 232

Query: 232 XXXXXSEEFDIRRSPISIAAAVIYI 256
                + E   R  P S+ AA IY+
Sbjct: 233 EVLQKALELIERSRPSSVMAATIYM 257