Miyakogusa Predicted Gene
- Lj3g3v0075800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0075800.1 Non Chatacterized Hit- tr|C6T923|C6T923_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19335
PE,85.13,0,seg,NULL; JAB,JAB1/Mov34/MPN/PAD-1; JAB1/MPN domain,NULL;
BRCA1/BRCA2-CONTAINING COMPLEX SUBUNIT 3,N,CUFF.40278.1
(432 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g01310.1 697 0.0
Glyma13g44030.1 696 0.0
Glyma13g44030.2 578 e-165
Glyma06g07980.3 52 2e-06
Glyma06g07980.2 52 2e-06
Glyma04g07940.1 52 2e-06
Glyma06g07980.1 51 2e-06
>Glyma15g01310.1
Length = 436
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/437 (78%), Positives = 368/437 (84%), Gaps = 6/437 (1%)
Query: 1 MSLTSVKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60
MSLTSV MSEEVWL+CVTHALSTETEEIMGLLLGDI+HSKNGSVTALIWGASPQTRSDRR
Sbjct: 1 MSLTSVTMSEEVWLSCVTHALSTETEEIMGLLLGDIKHSKNGSVTALIWGASPQTRSDRR 60
Query: 61 KDRVETNPEQLAAASALADRMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD 120
KDRVETNPEQLAAASALADRMT +TGRTTRVIGWYHSHPHITVLPSHVDVRTQ MYQLLD
Sbjct: 61 KDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120
Query: 121 SGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXXXXXXXXXXXXX 180
SGFIGLIFSCYSED NKVGRIQVIAFQSSDGKQNH SRPIPLSPVNR
Sbjct: 121 SGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKQNHRSRPIPLSPVNRSPVIDIDSSPSSS 180
Query: 181 XXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYLGGEKGGGNYLL 240
GYF+AE+ +QDT LGNFFANADA+YLG +K GGNY
Sbjct: 181 ENVSTKPGYFEAENAEQDTGDSRSVVVSKDGGRSD-LGNFFANADANYLGRDKSGGNYHP 239
Query: 241 NNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLSLINLDSPLASY 300
NNSD+ +D+DPMDMSESMQEAMHRSNLDMSGAE+VR+EIPLYVLP+LSLINLDSPL+SY
Sbjct: 240 NNSDTNIVDVDPMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINLDSPLSSY 299
Query: 301 MDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIEYCLSPAITALQ 360
DLQHV+FEEE+ AYNQAI QNMRD KVHPLTFIHHTSTYQASLCKLIEYCLSPAI ALQ
Sbjct: 300 TDLQHVLFEEEQNAYNQAILQNMRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQ 359
Query: 361 DRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRVASPVHQVASP-----VHRGSLS 415
DRLRENE+RLA++SEEAKSLEAEAYRGSEAS+ SPRRVASPVH+ S +H S
Sbjct: 360 DRLRENEIRLAVLSEEAKSLEAEAYRGSEASVGSPRRVASPVHRGGSSPGLRNLHDSPES 419
Query: 416 PASRNVASPGSRSRRGY 432
SRNVASPGSRSR+GY
Sbjct: 420 LGSRNVASPGSRSRKGY 436
>Glyma13g44030.1
Length = 436
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/437 (78%), Positives = 366/437 (83%), Gaps = 6/437 (1%)
Query: 1 MSLTSVKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60
MSLTSVKMSEEVWL+CVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1 MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60
Query: 61 KDRVETNPEQLAAASALADRMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD 120
KDRVETNPEQLAAASALADRMT +TGRTTRVIGWYHSHPHITVLPSHVDVRTQ MYQLLD
Sbjct: 61 KDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120
Query: 121 SGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXXXXXXXXXXXXX 180
SGFIGLIFSCYSED NKVGRIQVIAFQSSDGK NHMSRP+PLSPVNR
Sbjct: 121 SGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDIDSSPSSS 180
Query: 181 XXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYLGGEKGGGNYLL 240
GYFKAE+ +QDT LGNFFANADA+YLG +K GGNY
Sbjct: 181 ENVSTRPGYFKAENAEQDT-GDSRSVVVSKDGGRSDLGNFFANADANYLGRDKSGGNYHP 239
Query: 241 NNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLSLINLDSPLASY 300
NNSD+ +D+D MDMSESMQEAMHRSNLDMSGAE+VR+EIPLYVLP+LSLIN+DSPL+SY
Sbjct: 240 NNSDTNIVDVDAMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINIDSPLSSY 299
Query: 301 MDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIEYCLSPAITALQ 360
DLQHV+FEEER AYNQAI QN RD KVHPLTFIHHTSTYQASLCKLIEYCLSPAI ALQ
Sbjct: 300 TDLQHVLFEEERNAYNQAILQNKRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQ 359
Query: 361 DRLRENEVRLAIMSEEAKSLEAEAYRGSEASLSSPRRVASPVHQVASP-----VHRGSLS 415
DRLRENE+RLA++ EEAKSLEAEAYRGSEAS+ +PRRVASPVH+ S +H S
Sbjct: 360 DRLRENEIRLAVLREEAKSLEAEAYRGSEASVGTPRRVASPVHRGGSSPGLRNLHDSPES 419
Query: 416 PASRNVASPGSRSRRGY 432
SRNVASPGSRSR+GY
Sbjct: 420 LGSRNVASPGSRSRKGY 436
>Glyma13g44030.2
Length = 393
Score = 578 bits (1490), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/350 (80%), Positives = 296/350 (84%), Gaps = 1/350 (0%)
Query: 1 MSLTSVKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60
MSLTSVKMSEEVWL+CVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1 MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 60
Query: 61 KDRVETNPEQLAAASALADRMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD 120
KDRVETNPEQLAAASALADRMT +TGRTTRVIGWYHSHPHITVLPSHVDVRTQ MYQLLD
Sbjct: 61 KDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD 120
Query: 121 SGFIGLIFSCYSEDANKVGRIQVIAFQSSDGKQNHMSRPIPLSPVNRXXXXXXXXXXXXX 180
SGFIGLIFSCYSED NKVGRIQVIAFQSSDGK NHMSRP+PLSPVNR
Sbjct: 121 SGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDIDSSPSSS 180
Query: 181 XXXXXXXGYFKAESPDQDTXXXXXXXXXXXXXXXXXLGNFFANADASYLGGEKGGGNYLL 240
GYFKAE+ +QDT LGNFFANADA+YLG +K GGNY
Sbjct: 181 ENVSTRPGYFKAENAEQDT-GDSRSVVVSKDGGRSDLGNFFANADANYLGRDKSGGNYHP 239
Query: 241 NNSDSKEIDIDPMDMSESMQEAMHRSNLDMSGAEYVRREIPLYVLPSLSLINLDSPLASY 300
NNSD+ +D+D MDMSESMQEAMHRSNLDMSGAE+VR+EIPLYVLP+LSLIN+DSPL+SY
Sbjct: 240 NNSDTNIVDVDAMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINIDSPLSSY 299
Query: 301 MDLQHVIFEEERTAYNQAISQNMRDEKVHPLTFIHHTSTYQASLCKLIEY 350
DLQHV+FEEER AYNQAI QN RD KVHPLTFIHHTSTYQASLCKLIEY
Sbjct: 300 TDLQHVLFEEERNAYNQAILQNKRDGKVHPLTFIHHTSTYQASLCKLIEY 349
>Glyma06g07980.3
Length = 375
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 6 VKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVE 65
VK+S L V HA S T E+MGL+ G + ++ + A P ++ R +
Sbjct: 78 VKISALALLKMVVHARSGGTIEVMGLMQG---KTDADAIIVMDAFALPVEGTETRVNA-- 132
Query: 66 TNPEQLAAASALAD--RMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLDSGF 123
Q A + D + GR V+GWYHSHP S +DV TQ + Q F
Sbjct: 133 ----QADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF 188
Query: 124 IGLIFSCYSEDANKVGRIQVIAFQS 148
+ ++ G++++ AF++
Sbjct: 189 LAVVID--PTRTVSAGKVEIGAFRT 211
>Glyma06g07980.2
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 6 VKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVE 65
VK+S L V HA S T E+MGL+ G + ++ + A P ++ R +
Sbjct: 78 VKISALALLKMVVHARSGGTIEVMGLMQG---KTDADAIIVMDAFALPVEGTETRVNAQA 134
Query: 66 TNPEQLAAASALADRMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLDSGFIG 125
E + S + GR V+GWYHSHP S +DV TQ + Q F+
Sbjct: 135 DAYEYMVDYS----QTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLA 190
Query: 126 LIFSCYSEDANKVGRIQVIAFQS 148
++ G++++ AF++
Sbjct: 191 VVID--PTRTVSAGKVEIGAFRT 211
>Glyma04g07940.1
Length = 374
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 6 VKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVE 65
VK+S L V HA S T E+MGL+ G + ++ + A P ++ R +
Sbjct: 77 VKISALALLKMVVHARSGGTIEVMGLMQG---KTDADAIIVMDAFALPVEGTETRVNA-- 131
Query: 66 TNPEQLAAASALAD--RMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLDSGF 123
Q A + D + GR V+GWYHSHP S +DV TQ + Q F
Sbjct: 132 ----QADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF 187
Query: 124 IGLIFSCYSEDANKVGRIQVIAFQS 148
+ ++ G++++ AF++
Sbjct: 188 LAVVID--PTRTVSAGKVEIGAFRT 210
>Glyma06g07980.1
Length = 409
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 6 VKMSEEVWLTCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVE 65
VK+S L V HA S T E+MGL+ G + ++ + A P ++ R +
Sbjct: 78 VKISALALLKMVVHARSGGTIEVMGLMQG---KTDADAIIVMDAFALPVEGTETRVNA-- 132
Query: 66 TNPEQLAAASALAD--RMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLDSGF 123
Q A + D + GR V+GWYHSHP S +DV TQ + Q F
Sbjct: 133 ----QADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF 188
Query: 124 IGLIFSCYSEDANKVGRIQVIAFQS 148
+ ++ G++++ AF++
Sbjct: 189 LAVVID--PTRTVSAGKVEIGAFRT 211