Miyakogusa Predicted Gene

Lj3g3v0075720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0075720.1 tr|Q2HVW5|Q2HVW5_MEDTR Nucleoporin interacting
component; Protein prenyltransferase OS=Medicago
trun,91.73,0,SUBFAMILY NOT NAMED,NULL; NUCLEAR PORE COMPLEX PROTEIN
NUP93 (NUCLEOPORIN NUP93) (DEAD EYE PROTEIN),,CUFF.40306.1
         (855 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g44070.1                                                      1443   0.0  
Glyma15g01270.1                                                      1443   0.0  
Glyma15g01270.2                                                      1420   0.0  
Glyma07g16220.1                                                       137   4e-32
Glyma15g38710.1                                                        90   1e-17

>Glyma13g44070.1 
          Length = 915

 Score = 1443 bits (3736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/861 (83%), Positives = 744/861 (86%), Gaps = 6/861 (0%)

Query: 1   MANEDLASWSDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRAEAPSQSI 60
           MANE+L SW+DLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVR EAPSQSI
Sbjct: 55  MANEELGSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRTEAPSQSI 114

Query: 61  AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ 120
           AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
Sbjct: 115 AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ 174

Query: 121 KDNLRSFNDYMMKVLEEDWHKEKRDFLQSLNRISTLPRTNMVTNSNGGTRQGQIVSVAS- 179
           KDNLRSFNDYMMKVLEEDW KEKRDFLQSL+RISTLPRTN+  NSN GT  GQIVSV+S 
Sbjct: 175 KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSNVGTLPGQIVSVSST 234

Query: 180 -----NVPSMEVVPFTTRPIAEKKASVYAEVVKNLNRARQSGLPFKPAAAFKGAYESLNI 234
                 +PSME+V  T RPI EKKASVYAEVVK LN+AR++G PFKPAAAFKGAYE+L I
Sbjct: 235 SQVSSGMPSMEIVSLTGRPIVEKKASVYAEVVKKLNKAREAGSPFKPAAAFKGAYENLGI 294

Query: 235 DASGGKSVTMRKIWHLVQMLMDTDSPLQHVSEKMLLIIGARRHLEWGHEKYIMDTIQSHP 294
           DASGGKSVTMRKIWHLVQMLM  DS +Q VS++M LIIGARRHLEWGHEKYIMDTIQSHP
Sbjct: 295 DASGGKSVTMRKIWHLVQMLMGEDSAVQCVSKRMSLIIGARRHLEWGHEKYIMDTIQSHP 354

Query: 295 AQAALGGGVGNLQRIRAFLRIRLRDYGALDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE 354
           AQAALGGGVGNLQRIRAFLRIRLRDYG LDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE
Sbjct: 355 AQAALGGGVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE 414

Query: 355 ARNVALSSRASHQFAPLLTEWINTGGMVXXXXXXXXXXXXXRMLRTGDRVGRAGYDKKKL 414
           ARNVA SSR SHQFAPLLTEWIN GGMV             RMLRTGDRVGR  YDKKKL
Sbjct: 415 ARNVAQSSRTSHQFAPLLTEWINKGGMVPEEIATAASEECERMLRTGDRVGRTAYDKKKL 474

Query: 415 LLFAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPGGSSSIVLSDGLIPYSLD 474
           LL+AIISGSRRHIDRLLRDQP+LFSTIEDFLWFKLSAVRDCP G SSIVLSDGLIPYSLD
Sbjct: 475 LLYAIISGSRRHIDRLLRDQPSLFSTIEDFLWFKLSAVRDCPSGPSSIVLSDGLIPYSLD 534

Query: 475 DLQIYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLHLSKETGDEGYNIDAAHLSIV 534
           DLQ YLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVL+LSKE GDEGYNIDAAHLSIV
Sbjct: 535 DLQSYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLYLSKEAGDEGYNIDAAHLSIV 594

Query: 535 LADHGVLSEGAGAGQKLGVMDAYAEVSTIIRQYGSMYLRLGDXXXXXXXXXXXXXXXXXX 594
           LADHGVLSEGAG+GQKLGVMDAYAEVSTIIRQYGSMYLRLGD                  
Sbjct: 595 LADHGVLSEGAGSGQKLGVMDAYAEVSTIIRQYGSMYLRLGDLQMALEYFAQAAAAVGGG 654

Query: 595 XXSWTGRGNVDQQRQRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVTDFKARK 654
             SWTGRGNVDQQRQRN                                  FVTD KAR+
Sbjct: 655 ELSWTGRGNVDQQRQRNLMVKQLLTELLLRDGGIYLLLGARGTGEEGELGRFVTDPKARQ 714

Query: 655 QFLYEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAICALFRGRLDGESQTAG 714
           QFL EAACQCQEAGMYDKSIEIQKRVGSFS ALDTINKCLSEAICALFRGRLDGES+TAG
Sbjct: 715 QFLIEAACQCQEAGMYDKSIEIQKRVGSFSTALDTINKCLSEAICALFRGRLDGESRTAG 774

Query: 715 LIHSGNEILEAYPYYPDVSPQERIDVFEQQAVLRELESILSIHKLSRLGHHVDALREVAK 774
           LIHSGNEILE Y YYPDV  QER  VF+QQ VLR+LESILSIHKL+RLGH++DALREVAK
Sbjct: 775 LIHSGNEILETYSYYPDVRLQEREHVFDQQTVLRQLESILSIHKLARLGHYLDALREVAK 834

Query: 775 LPFLPLDPRGPDVAIDVFENLSPHVQACIPDLLKVALTCLDYVTDSDGSLRALRAKIASF 834
           LPFLPLDPRGPD+A+DV ENLSPHVQACIPDLLK ALTCLD VTDSDGSLRALRAKIASF
Sbjct: 835 LPFLPLDPRGPDIAVDVLENLSPHVQACIPDLLKTALTCLDNVTDSDGSLRALRAKIASF 894

Query: 835 IANNLKRNWPRDLYERVAQRL 855
           IANNL+RNWPRDLYERVAQRL
Sbjct: 895 IANNLRRNWPRDLYERVAQRL 915


>Glyma15g01270.1 
          Length = 861

 Score = 1443 bits (3735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/861 (82%), Positives = 739/861 (85%), Gaps = 6/861 (0%)

Query: 1   MANEDLASWSDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRAEAPSQSI 60
           MANEDL SW+DLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKT+R EAPSQSI
Sbjct: 1   MANEDLGSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTIRTEAPSQSI 60

Query: 61  AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ 120
           AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
Sbjct: 61  AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ 120

Query: 121 KDNLRSFNDYMMKVLEEDWHKEKRDFLQSLNRISTLPRTNMVTNSNGGTRQGQIV----- 175
           KDNLRSFNDYMMKVLEEDW KEKRDFLQSL+RISTLPRTN+  NSN GT  GQ+      
Sbjct: 121 KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSNVGTLPGQLAFVSST 180

Query: 176 -SVASNVPSMEVVPFTTRPIAEKKASVYAEVVKNLNRARQSGLPFKPAAAFKGAYESLNI 234
             V+S +PSME+VP T RPI EKKASVYAEVVK LN+AR+SG PFKPAAAFKGAYE+L I
Sbjct: 181 SQVSSGMPSMEIVPLTGRPIVEKKASVYAEVVKKLNKARESGSPFKPAAAFKGAYENLGI 240

Query: 235 DASGGKSVTMRKIWHLVQMLMDTDSPLQHVSEKMLLIIGARRHLEWGHEKYIMDTIQSHP 294
           DASGGKSVTMRKIWHLVQMLM  +S +Q VS++M LIIGARRHLEWGHEKYIMDTIQSHP
Sbjct: 241 DASGGKSVTMRKIWHLVQMLMGEESAVQRVSKRMSLIIGARRHLEWGHEKYIMDTIQSHP 300

Query: 295 AQAALGGGVGNLQRIRAFLRIRLRDYGALDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE 354
           AQAALGGGVGNLQRIRAFLRIRLRDYG LDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE
Sbjct: 301 AQAALGGGVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE 360

Query: 355 ARNVALSSRASHQFAPLLTEWINTGGMVXXXXXXXXXXXXXRMLRTGDRVGRAGYDKKKL 414
           ARNVA SSRASHQFAPLLTEWIN GGMV             RMLRTGDRVGR  YDKKKL
Sbjct: 361 ARNVAQSSRASHQFAPLLTEWINKGGMVPEEIAAAASEECERMLRTGDRVGRTAYDKKKL 420

Query: 415 LLFAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPGGSSSIVLSDGLIPYSLD 474
           LL+AIISGSRRHIDRLLRDQP+LFSTIEDFLWFKLSAVRDCP G SSIVLSDGLIPYSLD
Sbjct: 421 LLYAIISGSRRHIDRLLRDQPSLFSTIEDFLWFKLSAVRDCPSGPSSIVLSDGLIPYSLD 480

Query: 475 DLQIYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLHLSKETGDEGYNIDAAHLSIV 534
           DLQ YLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVL+LSKE GDEGYNIDAAHLSIV
Sbjct: 481 DLQSYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLYLSKEAGDEGYNIDAAHLSIV 540

Query: 535 LADHGVLSEGAGAGQKLGVMDAYAEVSTIIRQYGSMYLRLGDXXXXXXXXXXXXXXXXXX 594
           LADHGVLSEGAG+GQKLGVMDAYAEVSTIIRQYGSMYLRLGD                  
Sbjct: 541 LADHGVLSEGAGSGQKLGVMDAYAEVSTIIRQYGSMYLRLGDLQMALEYYAQAAAAVGGG 600

Query: 595 XXSWTGRGNVDQQRQRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVTDFKARK 654
             SWTGRGNVDQQRQRN                                  FVTD KAR+
Sbjct: 601 QLSWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGAGEEGELGRFVTDPKARQ 660

Query: 655 QFLYEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAICALFRGRLDGESQTAG 714
            FL EAAC CQEAGMYDKSIEIQKRVGSFS ALDTINKCLSEAICALFRGRLDGES+TAG
Sbjct: 661 LFLIEAACHCQEAGMYDKSIEIQKRVGSFSTALDTINKCLSEAICALFRGRLDGESRTAG 720

Query: 715 LIHSGNEILEAYPYYPDVSPQERIDVFEQQAVLRELESILSIHKLSRLGHHVDALREVAK 774
           LIHSGNEILE Y YYPD S QER  V EQQ VLR+LESILSIHKL RLGH+VDALREVAK
Sbjct: 721 LIHSGNEILETYTYYPDASLQEREHVLEQQTVLRQLESILSIHKLVRLGHYVDALREVAK 780

Query: 775 LPFLPLDPRGPDVAIDVFENLSPHVQACIPDLLKVALTCLDYVTDSDGSLRALRAKIASF 834
           LPF+PLDPRGPD+A+DV ENLSPHVQACIPDLLK ALTCLD VTDSDGSLRALRAKIASF
Sbjct: 781 LPFIPLDPRGPDIAVDVLENLSPHVQACIPDLLKAALTCLDNVTDSDGSLRALRAKIASF 840

Query: 835 IANNLKRNWPRDLYERVAQRL 855
           IANNLKRNWPRDLYE VAQRL
Sbjct: 841 IANNLKRNWPRDLYESVAQRL 861


>Glyma15g01270.2 
          Length = 827

 Score = 1420 bits (3676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/861 (81%), Positives = 732/861 (85%), Gaps = 40/861 (4%)

Query: 1   MANEDLASWSDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRAEAPSQSI 60
           MANEDL SW+DLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKT+R EAPSQSI
Sbjct: 1   MANEDLGSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTIRTEAPSQSI 60

Query: 61  AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ 120
           AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
Sbjct: 61  AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ 120

Query: 121 KDNLRSFNDYMMKVLEEDWHKEKRDFLQSLNRISTLPRTNMVTNSNGGTRQGQIV----- 175
           KDNLRSFNDYMMKVLEEDW KEKRDFLQSL+RISTLPRTN+  NSN GT  GQ+      
Sbjct: 121 KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSNVGTLPGQLAFVSST 180

Query: 176 -SVASNVPSMEVVPFTTRPIAEKKASVYAEVVKNLNRARQSGLPFKPAAAFKGAYESLNI 234
             V+S +PSME+VP T RPI EKKASVYAEVVK LN+AR+SG PFKPAAAFKGAYE+L I
Sbjct: 181 SQVSSGMPSMEIVPLTGRPIVEKKASVYAEVVKKLNKARESGSPFKPAAAFKGAYENLGI 240

Query: 235 DASGGKSVTMRKIWHLVQMLMDTDSPLQHVSEKMLLIIGARRHLEWGHEKYIMDTIQSHP 294
           DASGGKSVTMRKIWHLVQMLM  +S +Q VS++M LIIGARRHLEWGHEKYIMDTIQSHP
Sbjct: 241 DASGGKSVTMRKIWHLVQMLMGEESAVQRVSKRMSLIIGARRHLEWGHEKYIMDTIQSHP 300

Query: 295 AQAALGGGVGNLQRIRAFLRIRLRDYGALDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE 354
           AQAALGGGVGNLQRIRAFLRIRLRDYG LDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE
Sbjct: 301 AQAALGGGVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE 360

Query: 355 ARNVALSSRASHQFAPLLTEWINTGGMVXXXXXXXXXXXXXRMLRTGDRVGRAGYDKKKL 414
           ARNVA SSRASHQFAPLLTEWIN GGMV             RMLRTGDRVGR  YDKKKL
Sbjct: 361 ARNVAQSSRASHQFAPLLTEWINKGGMVPEEIAAAASEECERMLRTGDRVGRTAYDKKKL 420

Query: 415 LLFAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPGGSSSIVLSDGLIPYSLD 474
           LL+AIISGSRRHIDRLLRDQP+LFSTIEDFLWFKLSAVRDCP G SSIVLSDGLIPYSLD
Sbjct: 421 LLYAIISGSRRHIDRLLRDQPSLFSTIEDFLWFKLSAVRDCPSGPSSIVLSDGLIPYSLD 480

Query: 475 DLQIYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLHLSKETGDEGYNIDAAHLSIV 534
           DLQ YLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVL+LSKE GDEGYNIDAAHLSIV
Sbjct: 481 DLQSYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLYLSKEAGDEGYNIDAAHLSIV 540

Query: 535 LADHGVLSEGAGAGQKLGVMDAYAEVSTIIRQYGSMYLRLGDXXXXXXXXXXXXXXXXXX 594
           LADHGVLSEGAG+GQKLGVMDAYAEVSTIIRQYGSMYLRLGD                  
Sbjct: 541 LADHGVLSEGAGSGQKLGVMDAYAEVSTIIRQYGSMYLRLGDLQMALEYYAQAAAAVGGG 600

Query: 595 XXSWTGRGNVDQQRQRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVTDFKARK 654
             SWTGRG  ++                                       FVTD KAR+
Sbjct: 601 QLSWTGRGAGEEGE----------------------------------LGRFVTDPKARQ 626

Query: 655 QFLYEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAICALFRGRLDGESQTAG 714
            FL EAAC CQEAGMYDKSIEIQKRVGSFS ALDTINKCLSEAICALFRGRLDGES+TAG
Sbjct: 627 LFLIEAACHCQEAGMYDKSIEIQKRVGSFSTALDTINKCLSEAICALFRGRLDGESRTAG 686

Query: 715 LIHSGNEILEAYPYYPDVSPQERIDVFEQQAVLRELESILSIHKLSRLGHHVDALREVAK 774
           LIHSGNEILE Y YYPD S QER  V EQQ VLR+LESILSIHKL RLGH+VDALREVAK
Sbjct: 687 LIHSGNEILETYTYYPDASLQEREHVLEQQTVLRQLESILSIHKLVRLGHYVDALREVAK 746

Query: 775 LPFLPLDPRGPDVAIDVFENLSPHVQACIPDLLKVALTCLDYVTDSDGSLRALRAKIASF 834
           LPF+PLDPRGPD+A+DV ENLSPHVQACIPDLLK ALTCLD VTDSDGSLRALRAKIASF
Sbjct: 747 LPFIPLDPRGPDIAVDVLENLSPHVQACIPDLLKAALTCLDNVTDSDGSLRALRAKIASF 806

Query: 835 IANNLKRNWPRDLYERVAQRL 855
           IANNLKRNWPRDLYE VAQRL
Sbjct: 807 IANNLKRNWPRDLYESVAQRL 827


>Glyma07g16220.1 
          Length = 190

 Score =  137 bits (346), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 82/156 (52%), Positives = 96/156 (61%), Gaps = 36/156 (23%)

Query: 93  FPVEATSVEEYLQQVHEMAMVSAVQEAQKDNLRSFNDYMMKVLEEDWHKEKRDFLQSLNR 152
           FPVEATS+EEYLQ VHEM MVS VQEAQK                  H E          
Sbjct: 1   FPVEATSIEEYLQHVHEMTMVSTVQEAQKG-----------------HNE---------- 33

Query: 153 ISTLPRTNMVTNSNGGTRQGQIVSVAS------NVPSMEVVPFTTRPIAEKKASVYAEVV 206
              L +TN+V N+N GT  GQI S++S       + SME+VP T  PI EKK SV AE+V
Sbjct: 34  ---LSKTNIVGNNNVGTLLGQIASMSSTSSVSFGISSMEIVPLTGIPIVEKKTSVDAEIV 90

Query: 207 KNLNRARQSGLPFKPAAAFKGAYESLNIDASGGKSV 242
           KNLN+AR+SGLPFK AA  K AYE+L I+ASGGKS+
Sbjct: 91  KNLNKARESGLPFKLAAVVKDAYENLGINASGGKSM 126


>Glyma15g38710.1 
          Length = 72

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/86 (56%), Positives = 50/86 (58%), Gaps = 29/86 (33%)

Query: 297 AALGGGVGNLQRIRAFLRIRLRDYGALDFDAGDARRQPPVDTTWQQIYFCLRSGYYDEAR 356
           AALG GVGNLQRIRAFL IRLRDYG LDFDAG+ARR P VDTTWQQ              
Sbjct: 1   AALGVGVGNLQRIRAFLWIRLRDYGVLDFDAGNARRLPLVDTTWQQ-------------- 46

Query: 357 NVALSSRASHQFAPLLTEWINTGGMV 382
                          L EWIN GGMV
Sbjct: 47  ---------------LAEWINKGGMV 57