Miyakogusa Predicted Gene

Lj3g3v0075590.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0075590.3 Non Chatacterized Hit- tr|J3L103|J3L103_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G2,65.52,0.00000000000004,Pep_deformylase,Formylmethionine
deformylase; seg,NULL; PEPTIDE DEFORMYLASE,Formylmethionine
deformy,CUFF.40265.3
         (275 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22520.1                                                       320   2e-87
Glyma15g01240.1                                                       301   5e-82
Glyma10g27560.1                                                       151   9e-37
Glyma08g22520.2                                                       142   3e-34
Glyma07g03570.1                                                       112   4e-25
Glyma19g14000.1                                                        80   2e-15
Glyma19g29310.3                                                        80   2e-15
Glyma19g29310.2                                                        80   2e-15
Glyma19g14000.2                                                        80   2e-15

>Glyma08g22520.1 
          Length = 252

 Score =  320 bits (819), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 160/219 (73%), Positives = 174/219 (79%), Gaps = 20/219 (9%)

Query: 64  KAGWFSGL-------TLPKVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAP 116
           +AGWF GL        LP  VKAGDPVLH+PA++VDP+E+KSE+VQKIIDDMI+VMR AP
Sbjct: 47  RAGWFLGLGADSKKTNLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAP 106

Query: 117 GVGLAAPQIGLPFRIIVLEDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLLVIL 176
           GVGLAAPQIG+P RIIVLED KEY+ Y +K              E K QDRRPFDLLVIL
Sbjct: 107 GVGLAAPQIGIPLRIIVLEDTKEYISYVSK-------------EEAKTQDRRPFDLLVIL 153

Query: 177 NPKLEKKSNRTALFFEGCLSVSGYSAVVERYLDVEVTGFDRDGEPIKIKASGWQARILQH 236
           NPKLEKK  RTALFFEGCLSV G+ AVVER+LDVEVTG DR G PIKI ASGWQARILQH
Sbjct: 154 NPKLEKKGKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKIIASGWQARILQH 213

Query: 237 ECDHLDGTLYVDKMLPNTFRTSRNWDMPLAPGCPKLGPR 275
           ECDHLDGTLYVDKMLP TFRT  N D+PLA GCPKLGPR
Sbjct: 214 ECDHLDGTLYVDKMLPRTFRTVDNMDLPLAQGCPKLGPR 252


>Glyma15g01240.1 
          Length = 223

 Score =  301 bits (771), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 149/211 (70%), Positives = 165/211 (78%), Gaps = 14/211 (6%)

Query: 65  AGWFSGLTLPKVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAPGVGLAAPQ 124
           +GW +G  L K+VKAG+ VLH  A EV+  E+KSE+VQKIIDDM+RVMR APGVGLAAPQ
Sbjct: 27  SGWLAG-KLAKIVKAGEAVLHSRAEEVEAIEIKSERVQKIIDDMVRVMRKAPGVGLAAPQ 85

Query: 125 IGLPFRIIVLEDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLLVILNPKLEKKS 184
           IG+P RIIVLEDK +YM Y +               E+KAQDR PFDLLVILNPKL+  +
Sbjct: 86  IGIPLRIIVLEDKIQYMAYYSN-------------QELKAQDRTPFDLLVILNPKLKNTT 132

Query: 185 NRTALFFEGCLSVSGYSAVVERYLDVEVTGFDRDGEPIKIKASGWQARILQHECDHLDGT 244
            RTALFFEGCLSV GYSAVVERYLDVEV GFDR GEPIKI A+GWQARILQHECDHLDGT
Sbjct: 133 TRTALFFEGCLSVPGYSAVVERYLDVEVAGFDRYGEPIKINATGWQARILQHECDHLDGT 192

Query: 245 LYVDKMLPNTFRTSRNWDMPLAPGCPKLGPR 275
           LYVDKM+P TFR   N   PLA GCPKLGPR
Sbjct: 193 LYVDKMVPRTFRAPENSYKPLAHGCPKLGPR 223


>Glyma10g27560.1 
          Length = 127

 Score =  151 bits (381), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 81/132 (61%), Positives = 92/132 (69%), Gaps = 20/132 (15%)

Query: 64  KAGWFSGL-------TLPKVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAP 116
           +AGWF GL        LP  VK GDPVLH+PA++VDP E+K E+VQKIIDDMI+VMR A 
Sbjct: 8   RAGWFLGLGANNKKTNLPDTVKVGDPVLHEPAQDVDPIEIKLERVQKIIDDMIQVMRKAS 67

Query: 117 GVGLAAPQIGLPFRIIVLEDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLLVIL 176
           GVGLAAPQIG+P RIIVLED KEY+ Y +K              E K QDRRP DLLVIL
Sbjct: 68  GVGLAAPQIGIPLRIIVLEDTKEYISYVSK-------------EEAKTQDRRPADLLVIL 114

Query: 177 NPKLEKKSNRTA 188
           NPKL+KK  R A
Sbjct: 115 NPKLDKKGKRIA 126


>Glyma08g22520.2 
          Length = 153

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 85/117 (72%), Gaps = 20/117 (17%)

Query: 64  KAGWFSGL-------TLPKVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAP 116
           +AGWF GL        LP  VKAGDPVLH+PA++VDP+E+KSE+VQKIIDDMI+VMR AP
Sbjct: 47  RAGWFLGLGADSKKTNLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAP 106

Query: 117 GVGLAAPQIGLPFRIIVLEDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLL 173
           GVGLAAPQIG+P RIIVLED KEY+ Y +K              E K QDRRPFDLL
Sbjct: 107 GVGLAAPQIGIPLRIIVLEDTKEYISYVSK-------------EEAKTQDRRPFDLL 150


>Glyma07g03570.1 
          Length = 59

 Score =  112 bits (280), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/59 (83%), Positives = 53/59 (89%)

Query: 197 VSGYSAVVERYLDVEVTGFDRDGEPIKIKASGWQARILQHECDHLDGTLYVDKMLPNTF 255
           V G+ AVVER+LD+EVTG DR GEPIKI ASGWQARILQHECDHLDGTLYVDKM+P TF
Sbjct: 1   VDGFRAVVERHLDIEVTGLDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPKTF 59


>Glyma19g14000.1 
          Length = 267

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 30/176 (17%)

Query: 75  KVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAPGVGLAAPQIGLPFRIIVL 134
           K+V+  DP L    + +   +   + ++K++ +M  VM    G+GL+APQ+G+  +++V 
Sbjct: 76  KIVEYPDPRLRARNKRIVAFD---DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVF 132

Query: 135 EDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLLVILNPKLEKKSNRTALFFEGC 194
                 +G   +GE                        +V++NP++ + S +  LF EGC
Sbjct: 133 NP----VGEHGEGE-----------------------EIVLVNPRVSQYSKKLTLFNEGC 165

Query: 195 LSVSGYSAVVERYLDVEVTGFDRDGEPIKIKASGWQARILQHECDHLDGTLYVDKM 250
           LS  G +A V+R   V++   D +G    +  S   ARI QHE DHL G L+ ++M
Sbjct: 166 LSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPARIFQHEFDHLQGILFFERM 221


>Glyma19g29310.3 
          Length = 267

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 30/176 (17%)

Query: 75  KVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAPGVGLAAPQIGLPFRIIVL 134
           K+V+  DP L    + +   +   + ++K++ +M  VM    G+GL+APQ+G+  +++V 
Sbjct: 76  KIVEYPDPRLRARNKRIVAFD---DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVF 132

Query: 135 EDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLLVILNPKLEKKSNRTALFFEGC 194
               E      +GE   +EI                   V++NP++ + S +  LF EGC
Sbjct: 133 NPVGE------RGE--GEEI-------------------VLVNPRVSQYSKKLTLFNEGC 165

Query: 195 LSVSGYSAVVERYLDVEVTGFDRDGEPIKIKASGWQARILQHECDHLDGTLYVDKM 250
           LS  G +A V+R   V++   D +G    +  S   ARI QHE DHL G L+ ++M
Sbjct: 166 LSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPARIFQHEFDHLQGILFFERM 221


>Glyma19g29310.2 
          Length = 267

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 30/176 (17%)

Query: 75  KVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAPGVGLAAPQIGLPFRIIVL 134
           K+V+  DP L    + +   +   + ++K++ +M  VM    G+GL+APQ+G+  +++V 
Sbjct: 76  KIVEYPDPRLRARNKRIVAFD---DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVF 132

Query: 135 EDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLLVILNPKLEKKSNRTALFFEGC 194
               E      +GE   +EI                   V++NP++ + S +  LF EGC
Sbjct: 133 NPVGE------RGE--GEEI-------------------VLVNPRVSQYSKKLTLFNEGC 165

Query: 195 LSVSGYSAVVERYLDVEVTGFDRDGEPIKIKASGWQARILQHECDHLDGTLYVDKM 250
           LS  G +A V+R   V++   D +G    +  S   ARI QHE DHL G L+ ++M
Sbjct: 166 LSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPARIFQHEFDHLQGILFFERM 221


>Glyma19g14000.2 
          Length = 236

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 30/176 (17%)

Query: 75  KVVKAGDPVLHQPAREVDPSEMKSEKVQKIIDDMIRVMRNAPGVGLAAPQIGLPFRIIVL 134
           K+V+  DP L    + +   +   + ++K++ +M  VM    G+GL+APQ+G+  +++V 
Sbjct: 76  KIVEYPDPRLRARNKRIVAFD---DSLKKLVHEMFDVMYKTDGIGLSAPQLGINVQLMVF 132

Query: 135 EDKKEYMGYDTKGEIKPQEIKAQVEAEIKAQDRRPFDLLVILNPKLEKKSNRTALFFEGC 194
                 +G   +GE            EI           V++NP++ + S +  LF EGC
Sbjct: 133 NP----VGEHGEGE------------EI-----------VLVNPRVSQYSKKLTLFNEGC 165

Query: 195 LSVSGYSAVVERYLDVEVTGFDRDGEPIKIKASGWQARILQHECDHLDGTLYVDKM 250
           LS  G +A V+R   V++   D +G    +  S   ARI QHE DHL G L+ ++M
Sbjct: 166 LSFPGINADVKRPESVKIDARDINGTRFSVNLSDLPARIFQHEFDHLQGILFFERM 221