Miyakogusa Predicted Gene
- Lj3g3v0028550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0028550.1 Non Chatacterized Hit- tr|I1HYJ0|I1HYJ0_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,36.56,5e-19,zf-RanBP,Zinc finger, RanBP2-type; Zinc finger
domain,Zinc finger, RanBP2-type; Ran BP2/NZF zinc fin,CUFF.40209.1
(140 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g24770.1 214 2e-56
Glyma05g08440.1 199 6e-52
Glyma17g12580.1 195 2e-50
Glyma05g08430.1 191 1e-49
Glyma17g12570.1 162 1e-40
Glyma02g35480.1 150 5e-37
Glyma08g22470.1 125 1e-29
Glyma07g03620.1 122 9e-29
Glyma04g07270.1 105 1e-23
Glyma04g07270.3 105 1e-23
Glyma04g07270.2 105 1e-23
Glyma06g07350.2 102 9e-23
Glyma06g07350.1 102 9e-23
Glyma07g13870.1 65 3e-11
Glyma09g30770.1 60 8e-10
Glyma07g11510.1 57 9e-09
Glyma02g05500.1 53 1e-07
Glyma16g23920.1 52 2e-07
>Glyma06g24770.1
Length = 140
Score = 214 bits (545), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 113/140 (80%)
Query: 1 MSWSGGDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCG 60
MSWSGGDWMCGACQH+NFKKR+ CQSCAYPK+GGPDP TYRYN TETLAGDWYC+AMNCG
Sbjct: 1 MSWSGGDWMCGACQHINFKKRDACQSCAYPKFGGPDPTTYRYNSTETLAGDWYCTAMNCG 60
Query: 61 AHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHN 120
AHN+ASRS+C+RCG ++D DC++PPGWK+GDWIC RIGCGVHN
Sbjct: 61 AHNFASRSSCFRCGALKDGYSCRFGGNMDGSGGYGSDCNYPPGWKTGDWICTRIGCGVHN 120
Query: 121 YASRAECFKCKMPRDFGGED 140
YA+R ECFKCK PR+FG D
Sbjct: 121 YANRTECFKCKTPRNFGDAD 140
>Glyma05g08440.1
Length = 133
Score = 199 bits (507), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 110/140 (78%), Gaps = 7/140 (5%)
Query: 1 MSWSGGDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCG 60
MSWSGGDWMCG C+H+NFKKRE CQSC YPKYGGPDP+TYRYNRTE L GDW+C NCG
Sbjct: 1 MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALPGDWFC---NCG 57
Query: 61 AHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHN 120
AHNYA+RS+CYRCG+M+DD +FPPGWK+GDW+CPR GCGVHN
Sbjct: 58 AHNYANRSSCYRCGSMKDDYSSGYGNNSGGYGSD----TFPPGWKTGDWLCPRHGCGVHN 113
Query: 121 YASRAECFKCKMPRDFGGED 140
YASR EC+KCKMPRD+GG D
Sbjct: 114 YASRTECYKCKMPRDYGGAD 133
>Glyma17g12580.1
Length = 127
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 106/137 (77%), Gaps = 13/137 (9%)
Query: 1 MSWSGGDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCG 60
MSWSGGDWMCG C+H+NFKKRE CQSC YPKYGG DP+TYRYN+TE LAGDW+C NCG
Sbjct: 1 MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGHDPSTYRYNKTEALAGDWFC---NCG 57
Query: 61 AHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHN 120
AHNYASRS+CYRCG ++D +FPPGWK+GDW+CPRIGCGVHN
Sbjct: 58 AHNYASRSSCYRCGAIKDYYSSGEYGSD----------TFPPGWKNGDWLCPRIGCGVHN 107
Query: 121 YASRAECFKCKMPRDFG 137
YASR ECFKCK+PRD G
Sbjct: 108 YASRTECFKCKVPRDLG 124
>Glyma05g08430.1
Length = 133
Score = 191 bits (486), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 105/137 (76%), Gaps = 7/137 (5%)
Query: 1 MSWSGGDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCG 60
MSW GGDWMCG C+H+NFKKRE CQSC YPKYGG DP+TYRYN+TE LAGDW+C NCG
Sbjct: 1 MSWYGGDWMCGVCEHINFKKRETCQSCRYPKYGGTDPSTYRYNKTEALAGDWFC---NCG 57
Query: 61 AHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHN 120
AHNYASRS+CYRCG ++D +FP GWK+GDW+CPRIGCGVHN
Sbjct: 58 AHNYASRSSCYRCGAIKDYYCSGYGTKSGEYGSY----TFPLGWKNGDWLCPRIGCGVHN 113
Query: 121 YASRAECFKCKMPRDFG 137
YASR ECFKCK+PRDFG
Sbjct: 114 YASRTECFKCKVPRDFG 130
>Glyma17g12570.1
Length = 209
Score = 162 bits (409), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 86/112 (76%), Gaps = 7/112 (6%)
Query: 1 MSWSGGDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCG 60
MSWSGGDWMCG C+H+NFKKRE CQSC YPKYGGPDP+TYRYNRTE LAGDW+C NCG
Sbjct: 1 MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALAGDWFC---NCG 57
Query: 61 AHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICP 112
AHN+ASRSNC+RCG+M+DD +FPPGWK+GDW+CP
Sbjct: 58 AHNFASRSNCFRCGSMKDDYSSGYGNNSGGYGSD----TFPPGWKTGDWLCP 105
>Glyma02g35480.1
Length = 111
Score = 150 bits (378), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 89/131 (67%), Gaps = 20/131 (15%)
Query: 1 MSWSGGDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCG 60
MSW GGDWMCG C+H+NFKKRE CQSC YPKYGG DP+TYRYN+TE LAGDW+C NCG
Sbjct: 1 MSWYGGDWMCGVCEHINFKKRETCQSCRYPKYGGTDPSTYRYNKTEALAGDWFC---NCG 57
Query: 61 AHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHN 120
AHNY SRS+CYRCG ++D C++ + +IGCGVHN
Sbjct: 58 AHNYVSRSSCYRCGAIKD-----------------YYCAYLRWRIRAMPVNTQIGCGVHN 100
Query: 121 YASRAECFKCK 131
YASR ECFKCK
Sbjct: 101 YASRTECFKCK 111
>Glyma08g22470.1
Length = 146
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 82/140 (58%), Gaps = 10/140 (7%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYG----------GPDPATYRYNRTETLAGDWYCS 55
GDW C +CQH+NF++R+ CQ C KYG G +++ ++ GDWYC+
Sbjct: 5 GDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVVDFGGFGGRGGSSFGLTGSDVRPGDWYCA 64
Query: 56 AMNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIG 115
A NCGAHN+ASRS+C++CG +DD S PGWKSGDWIC R G
Sbjct: 65 AANCGAHNFASRSSCFKCGAFKDDLAGGGYNSSDILRSRAFGGSGRPGWKSGDWICSRSG 124
Query: 116 CGVHNYASRAECFKCKMPRD 135
C HN+ASR ECFKC PRD
Sbjct: 125 CNEHNFASRMECFKCSAPRD 144
>Glyma07g03620.1
Length = 144
Score = 122 bits (307), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYG---------GPDPATYRYNRTETLAGDWYCSA 56
GDW C +CQH+NF++R+ CQ C KYG G +++ ++ GDWYC+A
Sbjct: 5 GDWNCRSCQHLNFQRRDSCQRCGDAKYGDRVDFGGFGGRGGSSFGLTGSDVRPGDWYCAA 64
Query: 57 MNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGC 116
NCGAHN+ASRS+C++CG +DD S PGWKSGDWIC R GC
Sbjct: 65 ANCGAHNFASRSSCFKCGAFKDDLAGSYNSSDILRSRAFGG-SGRPGWKSGDWICTRSGC 123
Query: 117 GVHNYASRAECFKCKMPRD 135
HN+ASR ECFKC PRD
Sbjct: 124 NEHNFASRMECFKCSAPRD 142
>Glyma04g07270.1
Length = 171
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRT------------ETLAGDWY 53
GDW C C H+NF++RE CQ C P+ GG + + GDWY
Sbjct: 17 GDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRPGDWY 76
Query: 54 CSAMNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXX---XXDCSFPPGWKSGDWI 110
C+ NCGAHN+ASRS+C++CG ++D S PGWKSGDWI
Sbjct: 77 CTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKSGDWI 136
Query: 111 CPRIGCGVHNYASRAECFKCKMPRD 135
C R GC HN+A+R EC++C PRD
Sbjct: 137 CTRSGCNEHNFANRMECYRCNAPRD 161
>Glyma04g07270.3
Length = 159
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRT------------ETLAGDWY 53
GDW C C H+NF++RE CQ C P+ GG + + GDWY
Sbjct: 5 GDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRPGDWY 64
Query: 54 CSAMNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXX---XXDCSFPPGWKSGDWI 110
C+ NCGAHN+ASRS+C++CG ++D S PGWKSGDWI
Sbjct: 65 CTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKSGDWI 124
Query: 111 CPRIGCGVHNYASRAECFKCKMPRD 135
C R GC HN+A+R EC++C PRD
Sbjct: 125 CTRSGCNEHNFANRMECYRCNAPRD 149
>Glyma04g07270.2
Length = 159
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRT------------ETLAGDWY 53
GDW C C H+NF++RE CQ C P+ GG + + GDWY
Sbjct: 5 GDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRPGDWY 64
Query: 54 CSAMNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXX---XXDCSFPPGWKSGDWI 110
C+ NCGAHN+ASRS+C++CG ++D S PGWKSGDWI
Sbjct: 65 CTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKSGDWI 124
Query: 111 CPRIGCGVHNYASRAECFKCKMPRD 135
C R GC HN+A+R EC++C PRD
Sbjct: 125 CTRSGCNEHNFANRMECYRCNAPRD 149
>Glyma06g07350.2
Length = 163
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRT------------ETLAGDWY 53
GDW C C H+NF++RE CQ C P+ GG D + GDWY
Sbjct: 5 GDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRPGDWY 64
Query: 54 CSAMNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFP-------PGWKS 106
C+ NCGAHN+ASRS+C++CG ++D PGWKS
Sbjct: 65 CTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDVDMPRMRPFGFGGSGGGGSSARPGWKS 124
Query: 107 GDWICPRIGCGVHNYASRAECFKCKMPRD 135
GDWIC R GC HN+A+R EC++C PRD
Sbjct: 125 GDWICTRSGCNEHNFANRMECYRCNAPRD 153
>Glyma06g07350.1
Length = 163
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRT------------ETLAGDWY 53
GDW C C H+NF++RE CQ C P+ GG D + GDWY
Sbjct: 5 GDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRPGDWY 64
Query: 54 CSAMNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFP-------PGWKS 106
C+ NCGAHN+ASRS+C++CG ++D PGWKS
Sbjct: 65 CTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDVDMPRMRPFGFGGSGGGGSSARPGWKS 124
Query: 107 GDWICPRIGCGVHNYASRAECFKCKMPRD 135
GDWIC R GC HN+A+R EC++C PRD
Sbjct: 125 GDWICTRSGCNEHNFANRMECYRCNAPRD 153
>Glyma07g13870.1
Length = 75
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 24/81 (29%)
Query: 32 YGGPDPATYRYNRTETLAGDWYCSAMNCGAHNYASRSNCYRCGTMRDDXXXXXXXXXXXX 91
YGGPDP+ YRYN+T+ LAG+W+C N GAHNYA R G+ +
Sbjct: 2 YGGPDPSIYRYNKTKALAGNWFC---NYGAHNYA------RYGSNSGEYGSY-------- 44
Query: 92 XXXXXDCSFPPGWKSGDWICP 112
+FPPGWK+GDW+CP
Sbjct: 45 -------TFPPGWKNGDWLCP 58
>Glyma09g30770.1
Length = 458
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 49/128 (38%), Gaps = 32/128 (25%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCGAHNYA 65
GDW C C +NF + +C C K GP N E GDW C CG NYA
Sbjct: 311 GDWTCPECNFLNFARNTRCLKC---KTAGPT-KEANTNEVERKKGDWTCP--QCGFMNYA 364
Query: 66 SRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHNYASRA 125
+ C RC R P GDW CP GCG N+ S+
Sbjct: 365 RNTKCLRCPETR------------------------PKKHPGDWNCP--GCGFMNFGSKM 398
Query: 126 ECFKCKMP 133
+C C+ P
Sbjct: 399 KCLHCQEP 406
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 24/129 (18%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCGAHNYA 65
GDWMC C +NF + QC +C ++ +P+T + GDW C C N+A
Sbjct: 272 GDWMCPKCNFMNFSRNTQCLNCNEDRHKDINPSTVQMK-----PGDWTCP--ECNFLNFA 324
Query: 66 SRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHNYASRA 125
+ C +C T K GDW CP+ CG NYA
Sbjct: 325 RNTRCLKCKTAGPTKEANTNEVER---------------KKGDWTCPQ--CGFMNYARNT 367
Query: 126 ECFKCKMPR 134
+C +C R
Sbjct: 368 KCLRCPETR 376
>Glyma07g11510.1
Length = 190
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 49/128 (38%), Gaps = 32/128 (25%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSAMNCGAHNYA 65
GDW C C ++NF + C C K GP E GDW C CG NYA
Sbjct: 43 GDWTCPECNYLNFARNRLCLEC---KIEGPAKEANTI-EVERKKGDWTCPQ--CGFMNYA 96
Query: 66 SRSNCYRCGTMRDDXXXXXXXXXXXXXXXXXDCSFPPGWKSGDWICPRIGCGVHNYASRA 125
+ C RC R P GDW CP GCG N+AS+
Sbjct: 97 RNTKCLRCPETR------------------------PKKHPGDWNCP--GCGFMNFASKM 130
Query: 126 ECFKCKMP 133
+C C+ P
Sbjct: 131 KCLHCQEP 138
>Glyma02g05500.1
Length = 336
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 25/147 (17%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSA-------MN 58
GDW+C C + N+ RE+C+ C PK PA + ++ A MN
Sbjct: 62 GDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMTGASFPPYSHYFSRAPGGPEQKMN 121
Query: 59 CGAHNYASRSNCYRCGTM----RDDXXXXXXXXX-----------XXXXXXXXDCSFPPG 103
G ++ S + R D + S P G
Sbjct: 122 IGLLGNSAPSQSLHFNSNWPVPRADKYGVQPLSIWLPSRNYGSGHPHENSTNHNLSVPKG 181
Query: 104 WKSGDWICPRIGCGVHNYASRAECFKC 130
W++GDWIC CG HNY+SR++C KC
Sbjct: 182 WRNGDWIC---NCGFHNYSSRSQCKKC 205
>Glyma16g23920.1
Length = 334
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 6 GDWMCGACQHVNFKKREQCQSCAYPKYGGPDPATYRYNRTETLAGDWYCSA-------MN 58
GDW+C C + N+ RE+C+ C PK PA + ++ A MN
Sbjct: 60 GDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMTGASFPTYSHYFSRAPGVPEQKMN 119
Query: 59 CGAHNYASRSNCYRCGTM-----RDDXXXXXX----------XXXXXXXXXXXDCSFPPG 103
G + S + D + S P G
Sbjct: 120 IGLLGNGAPSQSLHLNSNWPVPGADKYGVQPLSIWLPGGNYGTVHHHENSTNQNLSVPKG 179
Query: 104 WKSGDWICPRIGCGVHNYASRAECFKC 130
W++GDWIC CG HNY+SR++C KC
Sbjct: 180 WRNGDWIC---NCGFHNYSSRSQCKKC 203