Miyakogusa Predicted Gene

Lj3g3v0014450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0014450.1 CUFF.40204.1
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g12790.1                                                       108   1e-24
Glyma10g04220.1                                                        99   2e-21
Glyma20g26360.1                                                        98   2e-21
Glyma10g40940.1                                                        89   1e-18

>Glyma12g12790.1 
          Length = 155

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 23  QFYSKVKDTVXXXXXXXXXXXXXXXXXXXXXXX--XAYNLSSILESLPELKASQKSDCED 80
           QFYSKVKD V                          AYNLSS+LESLPE+KAS+K  C +
Sbjct: 19  QFYSKVKDAVTSLSAQKSITKKKKKSKQQRRQKKLKAYNLSSLLESLPEVKASKKPGCAN 78

Query: 81  DFKLNCKSRKKLLLNEGQRLSAVLKDDFFQADPLSVIHQHLQNTQPIVE 129
           D KL CKSR+ L+L E  R+SAVL D  FQADPLS IHQ++QN QP+VE
Sbjct: 79  DSKLTCKSRQMLVLTERDRISAVLNDPNFQADPLSAIHQYIQNKQPVVE 127


>Glyma10g04220.1 
          Length = 106

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/73 (64%), Positives = 59/73 (80%)

Query: 57  AYNLSSILESLPELKASQKSDCEDDFKLNCKSRKKLLLNEGQRLSAVLKDDFFQADPLSV 116
           AYNLSS+LESLPE+KAS+K   E+D KL CKSR+ L+L+E  R+SAVL D  FQADPLS 
Sbjct: 16  AYNLSSLLESLPEVKASKKPGYENDSKLKCKSRQMLVLSERDRISAVLDDPTFQADPLSA 75

Query: 117 IHQHLQNTQPIVE 129
            H+++QN QP+VE
Sbjct: 76  THEYVQNKQPVVE 88


>Glyma20g26360.1 
          Length = 156

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 23  QFYSKVKDTVXXXXXXXXXXXXXXXXXXXXXXXX--AYNLSSILESLPELKASQKSDCED 80
           QFYSKVKD V                          AYNLSS+LESLPE+K+S+K  CE+
Sbjct: 19  QFYSKVKDAVTSLSTQKSITKKKKKSKQQRRQNKLKAYNLSSLLESLPEVKSSKKPVCEN 78

Query: 81  DFKLNCKSRKKLLLNEGQRLSAVLKDDFFQADPLSVIHQHLQNTQPIVE 129
           D KL CKSR+ L+L E  R+SAVL D  F+ADPLS IHQ++Q+ Q +VE
Sbjct: 79  DGKLKCKSRQILVLTERDRISAVLNDPNFRADPLSAIHQYIQSKQLVVE 127


>Glyma10g40940.1 
          Length = 69

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 53/65 (81%)

Query: 57  AYNLSSILESLPELKASQKSDCEDDFKLNCKSRKKLLLNEGQRLSAVLKDDFFQADPLSV 116
           AYNLSS+LESLPE+KAS+K  CE+D KL CKSR+ L+L E  ++SAVL D  FQADPLS 
Sbjct: 5   AYNLSSLLESLPEVKASKKPGCENDSKLKCKSRQMLVLTERDQISAVLNDPNFQADPLSA 64

Query: 117 IHQHL 121
           IHQ++
Sbjct: 65  IHQYI 69