Miyakogusa Predicted Gene

Lj3g3v0012340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0012340.1 CUFF.40186.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g00360.1                                                        94   3e-20

>Glyma02g00360.1 
          Length = 76

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 1/77 (1%)

Query: 1  MSSLGTSKGILEIAKFGVYVTVPIVLMYTFANYTNNYLHKFIGKKSYVEYXXXXXXXXXX 60
          MSSLGTSKGILEIAKFGVYVTVPI+LMYTFAN  +N L KF+G +SY+EY          
Sbjct: 1  MSSLGTSKGILEIAKFGVYVTVPIILMYTFANNPSN-LRKFMGHRSYIEYPPEAEKPPSP 59

Query: 61 XXXXXKARELAHKRNNS 77
                ARE+A KRN+S
Sbjct: 60 EELREMAREMARKRNSS 76