Miyakogusa Predicted Gene

Lj3g3v0012290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0012290.1 tr|D7LAA6|D7LAA6_ARALL ATMRP11 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_480238 PE=3
SV=1,59.7,0.000000000000009,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.40192.1
         (298 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g44750.1                                                       102   5e-22

>Glyma13g44750.1 
          Length = 1215

 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 52/67 (77%)

Query: 231 MNCGVVKQLDFEDLLPLPTDMGPSPCHEIILSCWRAQXXXXXXXXXXXRALCSAYGWPYL 290
           MN GV+KQLD EDLLPLPTD+GPS CH++ILSCW+AQ           RALCSAYGWPYL
Sbjct: 1   MNHGVIKQLDPEDLLPLPTDIGPSSCHDVILSCWQAQLSNNDSNPSLFRALCSAYGWPYL 60

Query: 291 RLGLLKV 297
            LGLLKV
Sbjct: 61  CLGLLKV 67