Miyakogusa Predicted Gene

Lj3g3v0002180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0002180.1 Non Chatacterized Hit- tr|K4BLR8|K4BLR8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,44.19,0.00000000000003,ZF_RING_2,Zinc finger, RING-type;
seg,NULL; no description,Zinc finger, RING/FYVE/PHD-type,CUFF.40174.1
         (726 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g44860.1                                                       298   2e-80
Glyma01g06060.1                                                        52   3e-06
Glyma02g12150.1                                                        51   4e-06

>Glyma13g44860.1 
          Length = 698

 Score =  298 bits (763), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/385 (47%), Positives = 224/385 (58%), Gaps = 33/385 (8%)

Query: 1   MTKTSEEFWLNLMNSDSANHDDA-------TATTXXXXXXXXXXXXXNMNETSSLFYSQE 53
           M K SEE  L+LMN+DSANHD           T              N++ETS   Y+ E
Sbjct: 8   MAKRSEELGLSLMNTDSANHDRIPGGCHPNDTTAPLPLVSPSPFPHWNLHETSQ-HYNNE 66

Query: 54  QHGGSSMTAVSSQFGGSQNSQMDPSCLYEGQEHVSLPC--------PVGYMGWPYQYSRH 105
             G +SM   SSQF   QN QMD +  +  +EH  LPC        P GY+GWPYQY RH
Sbjct: 67  PAGVNSMID-SSQFRSYQNFQMDHNYSHRAEEHNFLPCRPDSRFPCPEGYIGWPYQYDRH 125

Query: 106 GDLPISDDVTNVNFNLNSSVKPDSDGKCVTPMDSLATRLQMGTPSGTAMSSNIGQ--LNT 163
            +L I  +V N +FNLN+  KPD+ G CVTP+   A+RLQM  P+GTAMS+NIGQ  L+ 
Sbjct: 126 NNLAIPSNVRNASFNLNNFEKPDNGGMCVTPIYGSASRLQMVNPTGTAMSANIGQPSLDM 185

Query: 164 NLGMSLFNQNQGGAGPLLNAGKLDERLSTAGSGS-NKETRSNAIMPRVNVSTNSQRAHLL 222
           N GM+L N NQG   PLL  GK DER  T GSGS NKE++S+A+ P+ NV+ NS+RA L 
Sbjct: 186 NSGMALCNPNQGCVEPLLTIGKHDERYMTMGSGSNNKESKSSAVTPKFNVTGNSERAFLP 245

Query: 223 PINTLHNQPGNR-ILSPGLDMNSAYSGFQNDSGVISDLAQMSGQEVMFDSRPGIQSG--- 278
           PIN+ HN  G+R  L+PG DMN  +S FQNDSG ISDLA     E +FDS PG++ G   
Sbjct: 246 PINSYHNHLGSRSSLNPGFDMNDTFSAFQNDSGFISDLAPSGNHEALFDSIPGLRLGPSY 305

Query: 279 --LWPAAADQNHHFRQVNRDSGLGGVKDRDPR-------HGFERXXXXXXXXXXXXXXXX 329
              WPAA +QN +  Q NRD GL GVKD           +G ER                
Sbjct: 306 AFQWPAAGEQNRYLGQFNRDLGLAGVKDTSMEFTDVGLTNGLERCMDLNSLPIVGSQTMP 365

Query: 330 CDSRQRSVNRQLVPSSIGVVTNQLP 354
            +SRQ   NRQLVPSS GVVT+ LP
Sbjct: 366 FESRQSWANRQLVPSSSGVVTDNLP 390



 Score =  270 bits (691), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 162/284 (57%), Positives = 177/284 (62%), Gaps = 12/284 (4%)

Query: 454 RGIRGQDPSGNHGQSQVDGSIQQSNPPLGRHYAPDQGMVIGKGNMTAQVSRQSTIPSLKR 513
           R  RGQD S N GQSQ  GSIQQSN  L      D G+  G G MTAQVSR S + SLKR
Sbjct: 416 RSTRGQDLSSNPGQSQAGGSIQQSNSLLRPQSTSDVGIQSGMGYMTAQVSRPSNMSSLKR 475

Query: 514 PASQPLSSTVQEQRRKTRPTQTSIHPPNPPWTRLPPSAPNTPQAIAPLVYAPLSLTPHAT 573
            ASQPLSSTVQ Q RKT PTQ  IHP  P W RL PS PNT +A++PL+    SLT  A 
Sbjct: 476 AASQPLSSTVQNQHRKTLPTQF-IHPSIPNWNRLAPSVPNTSRAMSPLIRPAQSLTAQAP 534

Query: 574 -QSFVPPSLPT---KSAXXXXXXXXXXXXXXXXXX-----DQRISPSRPLSHPAPPLLNQ 624
             S VPPS PT   KS                        D+RIS     S    P  NQ
Sbjct: 535 PHSVVPPSFPTTWTKSVLQAPNTTRAIHPKMHTATFLAPNDKRISSFHHPSSHTSPRTNQ 594

Query: 625 --QQLIAQSLARQRLMNQIIQSTPATAHNYIKYKDQTPEPLGYKCMLCKRDLSYVPEGPI 682
              Q++AQ+LA QRL   II S P  A NYIK+KDQT EP GYKC+LCKRDLSY PEGPI
Sbjct: 595 SNHQMLAQALAHQRLKAPIIPSAPRIASNYIKFKDQTAEPSGYKCLLCKRDLSYAPEGPI 654

Query: 683 SQPPTPPAAAVLSCGHTFHQHCLEKMTPDGQSKDPPCIPCALGE 726
           SQPP PPA AVL CGHTFH +CLE++TPD QSK PPCIPCAL E
Sbjct: 655 SQPPVPPATAVLPCGHTFHDYCLERITPDDQSKYPPCIPCALLE 698


>Glyma01g06060.1 
          Length = 346

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 664 GYKCMLCKRDLSY---VPEGPISQPPTPPAAAVLSCGHTFHQHCLEKMTPDGQSKDPPCI 720
           G+KC LC+R LS         I +    P   VL C H FH  CLE+ TP  +  DPPC 
Sbjct: 210 GFKCGLCERFLSQRSPWSSRRIVRSGDMPTIGVLPCCHAFHAECLEQATPKTRKSDPPCP 269

Query: 721 PCA 723
            C 
Sbjct: 270 VCV 272


>Glyma02g12150.1 
          Length = 414

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 664 GYKCMLCKRDL---SYVPEGPISQPPTPPAAAVLSCGHTFHQHCLEKMTPDGQSKDPPCI 720
           G++C LC+R L   S      I +    P   VL C H FH  CLE+ TP  Q  DPPC 
Sbjct: 236 GFRCGLCERFLTQRSPWSSRRIVRSGDMPTIGVLPCCHAFHAECLEQTTPKTQKSDPPCP 295

Query: 721 PCA 723
            C 
Sbjct: 296 VCV 298