Miyakogusa Predicted Gene
- Lj3g3v0002100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0002100.1 tr|A9TGW3|A9TGW3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_145447,46.9,4e-19,no description,Heat shock protein
DnaJ, N-terminal; DnaJ,Heat shock protein DnaJ, N-terminal;
DNAJ_2,CUFF.40168.1
(139 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g02480.1 192 8e-50
Glyma08g23540.1 142 1e-34
Glyma15g04040.2 65 3e-11
Glyma15g04040.1 61 3e-10
Glyma13g41360.1 60 5e-10
Glyma07g18550.1 54 5e-08
Glyma18g43430.1 54 6e-08
Glyma07g11690.2 52 1e-07
Glyma07g11690.1 52 2e-07
Glyma06g07710.1 51 4e-07
Glyma08g22800.1 51 4e-07
Glyma15g00950.1 50 5e-07
Glyma08g19230.1 49 1e-06
Glyma14g35680.1 49 1e-06
Glyma05g24740.1 49 1e-06
Glyma03g07770.1 49 2e-06
Glyma02g01730.1 49 2e-06
Glyma08g14290.1 49 2e-06
Glyma14g35680.2 48 3e-06
Glyma0070s00210.1 48 3e-06
>Glyma07g02480.1
Length = 156
Score = 192 bits (488), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/150 (66%), Positives = 116/150 (77%), Gaps = 12/150 (8%)
Query: 1 MAAAAAGVIGG--YSLSWMQFKGRERNHNRV-----MICCSSSLMDSYKTLRVQPGASQT 53
MAAA AGV+GG S SWM+FKG+ER ++ SSS+MD YKTLR+Q GAS++
Sbjct: 1 MAAATAGVVGGNGSSASWMRFKGKERKQTKMNKSRISCSYSSSVMDPYKTLRIQRGASES 60
Query: 54 EVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVVMANLRGESNTSLMYE----AGID 109
EV+KAFR LALQYHPDVC+GS CGVQFH INEAYD VMANLRGESN + YE AGID
Sbjct: 61 EVRKAFRQLALQYHPDVCRGSNCGVQFHEINEAYDTVMANLRGESNATESYEAYYDAGID 120
Query: 110 EAIKGVNDQDLEDLWEEWMGWEGAGIRDYS 139
E ++G+ND D D+WEEWMGWEGAGIRDYS
Sbjct: 121 EPLRGMNDPDW-DMWEEWMGWEGAGIRDYS 149
>Glyma08g23540.1
Length = 142
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 96/138 (69%), Gaps = 25/138 (18%)
Query: 15 SWMQFKG-RERN---HNRVMICCSSS----LMDSYKTLRVQPGASQTEVKKAFRHLALQY 66
SWM+FKG +ER N+ I CS S ++D YKTLR++ GAS++E Y
Sbjct: 10 SWMRFKGGKERKLTKMNKSRINCSYSSSSSVIDPYKTLRIKRGASESE-----------Y 58
Query: 67 HPDVCQGSKCGVQFHHINEAYDVVMANLRGESNTSLMYEA-----GIDEAIKGVNDQDLE 121
HPDVC+GS CGVQFH INEAYDVVM+ LRGESN + YEA GIDE ++G+ND D
Sbjct: 59 HPDVCRGSNCGVQFHEINEAYDVVMSKLRGESNEAESYEAYYDAGGIDEPLRGMNDPDW- 117
Query: 122 DLWEEWMGWEGAGIRDYS 139
D+WEEWMGWEGAGIRDYS
Sbjct: 118 DMWEEWMGWEGAGIRDYS 135
>Glyma15g04040.2
Length = 269
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 25 NHNRVMICCSSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHIN 84
N NR M+ + Y L V P AS E+KKA+R LAL+YHPDV + K +F I
Sbjct: 61 NRNRTMVVRARRSESPYDVLGVSPSASVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIK 120
Query: 85 EAYDVVMANLRGESNTSLMYEAG----------------IDEAIKGVNDQDLEDLWEEWM 128
AY+ ++ S++ Y++G +E G+ D +DL EE+
Sbjct: 121 HAYNTLL-----NSSSRKKYDSGSRGYDFSQGSRSRNVQTEEEFYGLEDF-FKDLQEEFK 174
Query: 129 GWEG 132
WE
Sbjct: 175 NWEA 178
>Glyma15g04040.1
Length = 286
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 25 NHNRVMICCSSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHIN 84
N NR M+ + Y L V P AS E+KKA+R LAL+YHPDV + K +F I
Sbjct: 61 NRNRTMVVRARRSESPYDVLGVSPSASVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIK 120
Query: 85 EAYDVVM 91
AY+ ++
Sbjct: 121 HAYNTLL 127
>Glyma13g41360.1
Length = 280
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 25 NHNRVMICCSSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHIN 84
N NR M+ + Y+ L V P A+ ++KKA+R LAL+YHPDV + K +F I
Sbjct: 72 NRNRTMVVRARRSESPYEVLGVSPSATVDQIKKAYRKLALKYHPDVNKEDKAQEKFMRIK 131
Query: 85 EAYDVVMANLRGESNTSLMYEAG----------------IDEAIKGVNDQDLEDLWEEWM 128
AY+ ++ S + Y++G +E G+ D +DL +E+
Sbjct: 132 HAYNTLL-----NSRSRKKYDSGSRGYDFSQGSRTRNIQAEEEFYGLED-FFKDLQQEFR 185
Query: 129 GWEG 132
WE
Sbjct: 186 NWEA 189
>Glyma07g18550.1
Length = 580
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVV 90
+D YK L V ASQ E++KAF L+LQYHPD + +F IN AY+++
Sbjct: 30 IDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKSKGAQEKFSQINNAYEIL 82
>Glyma18g43430.1
Length = 577
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVV 90
+D YK L V ASQ E++KAF L+LQYHPD + +F IN AY+++
Sbjct: 30 IDPYKVLGVDKNASQREIQKAFHRLSLQYHPDKNKAKGAQEKFSQINNAYELL 82
>Glyma07g11690.2
Length = 369
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 24 RNHNRVMICCSSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHI 83
RN +R + + + D Y TL V P A+ E+K ++R LA +YHPD+ + +F I
Sbjct: 52 RNRSRAAVVRAKAGTDYYSTLNVGPNATLQEIKASYRKLARKYHPDMNKSPGAEDKFKEI 111
Query: 84 NEAYDVVMANLR-------GESNTSLMYEAGIDEAIKGVNDQDLEDLW 124
+ AY+V+ + + GES L + G GV+ DL D +
Sbjct: 112 SAAYEVLSDDEKRSLYDRFGES--GLQGDNGGSTGAPGVDPFDLFDTF 157
>Glyma07g11690.1
Length = 525
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 24 RNHNRVMICCSSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHI 83
RN +R + + + D Y TL V P A+ E+K ++R LA +YHPD+ + +F I
Sbjct: 52 RNRSRAAVVRAKAGTDYYSTLNVGPNATLQEIKASYRKLARKYHPDMNKSPGAEDKFKEI 111
Query: 84 NEAYDVV 90
+ AY+V+
Sbjct: 112 SAAYEVL 118
>Glyma06g07710.1
Length = 329
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK--CGVQFHHINEAYDV------ 89
+D Y L V A++ ++KKA+R LA+++HPD +K F I+EAY+
Sbjct: 3 LDYYNVLNVNRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKEISEAYEARNVLSD 62
Query: 90 ----VMANLRGESNTSLMYEAGIDEAIKGVNDQDLEDLWEEWMGWEGAGI 135
V+ + GE G + A G N ++ ED++ E+ G G
Sbjct: 63 PQKRVVYDQDGEEGLKDRPPPGNESASSGFNPRNAEDIFAEFFGSSPFGF 112
>Glyma08g22800.1
Length = 472
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 34 SSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVVMAN 93
+S+ D Y TL V AS E+K ++R LA QYHPDV + +F I+ AY+V+
Sbjct: 16 ASASGDYYGTLGVSKSASAREIKASYRRLARQYHPDVNKEPGATEKFKQISTAYEVL--- 72
Query: 94 LRGESNTSLMY----EAGIDEAIKGVN---DQDLEDLWEEWMGWEGAG 134
+ MY EAG+ + G + + DL+E + G G
Sbjct: 73 --SDDKKRAMYDQYGEAGVKSTVGGASAAYTTNPLDLFETFFGSRMGG 118
>Glyma15g00950.1
Length = 493
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 35 SSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVVMANL 94
+S D Y TL V A+ E+K A+R LA QYHPDV + +F I+ AY+ V+++
Sbjct: 63 ASSSDYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYE-VLSDD 121
Query: 95 RGESNTSLMYEAGIDEAIKG 114
+ + EAG+ A+ G
Sbjct: 122 KKRALYDQYGEAGVKSAVGG 141
>Glyma08g19230.1
Length = 171
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 41 YKTLRVQPGASQTE-VKKAFRHLALQYHPDVCQ----GSKCGVQFHHINEAYDVVM-ANL 94
YK L + P ++ T+ +KKA+R +AL+YHPDVCQ + F +N AY + L
Sbjct: 54 YKVLSLSPKSATTDDIKKAYRSMALRYHPDVCQDCSKKEESTRMFVQLNAAYQTLSNPRL 113
Query: 95 RGESNTSLMYEAGIDEAIKGVNDQDLEDLWEEWMG 129
R E + L G+ GV D+ +W+ +
Sbjct: 114 RAEYDCEL----GLRSEKIGVGDETWRYIWQNQLA 144
>Glyma14g35680.1
Length = 469
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 34 SSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGV-QFHHINEAYDVV 90
SS+ D Y+TL V ASQ E+KKAF LA +YHPD + + +F I EAY+ +
Sbjct: 78 SSADRDYYRTLGVPENASQDEIKKAFHSLAKKYHPDANKNNPSAKRKFQDIREAYETL 135
>Glyma05g24740.1
Length = 188
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 41 YKTLRVQPG-ASQTEVKKAFRHLALQYHPDVCQGSKCGVQ----FHHINEAYDVV 90
YK L V PG A+ E+K+A+R +ALQYHPDVC + F +N AY+ +
Sbjct: 54 YKILSVSPGSATMDEIKRAYRSMALQYHPDVCHDPSMKEESTRMFVQLNAAYETL 108
>Glyma03g07770.1
Length = 337
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK--CGVQFHHINEAYDVV 90
+D YK L+V AS ++KKA+R LA+++HPD +K +F I+EAYDV+
Sbjct: 3 VDYYKLLQVDRNASDEDLKKAYRKLAMKWHPDKNPNNKRDAEAKFKQISEAYDVL 57
>Glyma02g01730.1
Length = 346
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 41 YKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK-CGVQFHHINEAYDVV 90
Y L + GAS+ ++K+A+R LAL+YHPD G++ +F IN AY+V+
Sbjct: 28 YDVLEIPKGASEEQIKRAYRKLALKYHPDKNPGNQEANKRFAEINNAYEVL 78
>Glyma08g14290.1
Length = 437
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 39 DSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGVQFHHINEAYDVVMANLRGES 98
D Y L V AS++E+K A+R LA YHPDV + +F I+ AY+ V+++ S
Sbjct: 82 DYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYE-VLSDDEKRS 140
Query: 99 NTSLMYEAGIDEAIKGVND-QDLEDLWE---EWMGWEGAGIR 136
EAG+ + G+ D + DL+E E M GAG R
Sbjct: 141 IYDRFGEAGLKGSAMGMGDFSNPFDLFESLFEGMN-RGAGSR 181
>Glyma14g35680.2
Length = 408
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 34 SSSLMDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSKCGV-QFHHINEAYDVV 90
SS+ D Y+TL V ASQ E+KKAF LA +YHPD + + +F I EAY+ +
Sbjct: 78 SSADRDYYRTLGVPENASQDEIKKAFHSLAKKYHPDANKNNPSAKRKFQDIREAYETL 135
>Glyma0070s00210.1
Length = 248
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 38 MDSYKTLRVQPGASQTEVKKAFRHLALQYHPDVCQGSK--CGVQFHHINEAYDVV 90
+D YK L+V AS ++KKA+R LA+++HPD +K +F I+EAYDV+
Sbjct: 3 VDYYKLLQVDRNASDEDLKKAYRKLAMKWHPDKNPNNKRDAEAKFKQISEAYDVL 57