Miyakogusa Predicted Gene
- Lj2g3v3340810.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3340810.3 Non Chatacterized Hit- tr|I1L974|I1L974_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17392 PE,79.7,0,folC:
bifunctional protein FolC,Folylpolyglutamate synthetase; seg,NULL;
MurD-like peptide ligases, ,CUFF.40127.3
(549 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g07590.1 817 0.0
Glyma14g31620.1 464 e-130
Glyma14g07100.1 124 4e-28
Glyma02g34760.1 121 2e-27
Glyma10g16410.1 120 4e-27
Glyma18g03820.1 120 5e-27
Glyma13g08780.1 113 6e-25
Glyma02g41870.1 99 1e-20
>Glyma10g07590.1
Length = 529
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/530 (78%), Positives = 447/530 (84%), Gaps = 13/530 (2%)
Query: 20 QMGSLRTMCSRQEDPEMKDLLDYIDSLKNYEKSGVPTGAGTDSDDGFDLRRMTRLMDHFG 79
++G +RT+ S E MKD LDY+DSLKNYEKSGVP GAGTDS DGFDL RM RLM+ FG
Sbjct: 13 RVGPIRTLSSHSE---MKDFLDYLDSLKNYEKSGVPKGAGTDSSDGFDLGRMRRLMERFG 69
Query: 80 NPHSKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVS 139
NPHSKFKAVHIAGTKGKGSTAAF+SNILR EGYSVGCYTSPHI TIRERILLG+SG PVS
Sbjct: 70 NPHSKFKAVHIAGTKGKGSTAAFVSNILRNEGYSVGCYTSPHILTIRERILLGKSGHPVS 129
Query: 140 AKLLNGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDA 199
AKLLN LF RIK D+DQA+K+ENGCISHFEVFT MAF+LFA+ENVDIAVIEAGLGGARDA
Sbjct: 130 AKLLNDLFRRIKPDIDQAMKEENGCISHFEVFTTMAFLLFADENVDIAVIEAGLGGARDA 189
Query: 200 TNIISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERII 259
TNIISSSGL A+VITTVGEEHLAALGGSLETIAMAKAGIIKQ PLVLGGPF+PHIERII
Sbjct: 190 TNIISSSGLVASVITTVGEEHLAALGGSLETIAMAKAGIIKQDRPLVLGGPFVPHIERII 249
Query: 260 QDKAITLDSPVVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXXXXQM 319
+DKA+ +DSPVVSA DTGN+C +KSFSI NGRPCQICDI IQ QM
Sbjct: 250 RDKAVAMDSPVVSAYDTGNKCTVKSFSIRNGRPCQICDILIQ-------SCKLHDVKLQM 302
Query: 320 PGDHQLQNAATATCVALCLRNLGWRISDESIRSGLEHTYLVGRSQFLTSEEAEVLGLAGI 379
GDHQLQNAATATCVAL LRNLGW ISDESIR GLE TYL+GRSQFLTSEEAEVLGL G
Sbjct: 303 LGDHQLQNAATATCVALVLRNLGWSISDESIRYGLEDTYLLGRSQFLTSEEAEVLGLTGS 362
Query: 380 TVLLDGAHTKESAKALINTIRMAFPKARFAFVVAMANDKDHVGFAREVLSGVHAETVLLT 439
TVLLDGAHTKESAKAL+NTIRMAFPKA+ FVVAMA+DKDHVGFARE+LSGVH ETVLLT
Sbjct: 363 TVLLDGAHTKESAKALMNTIRMAFPKAQLVFVVAMASDKDHVGFAREILSGVHVETVLLT 422
Query: 440 EANIAGDVTRTTPASSLRDSWIKASEELGIGICHXXXXXXXXXXXXXXQSVSSESNLGDD 499
EA IAG VTRTTPAS LRDSWIKAS+ELGIGI H Q V SESNLG D
Sbjct: 423 EAAIAGGVTRTTPASLLRDSWIKASDELGIGIVH--DGMAEYSELLKEQPVGSESNLG-D 479
Query: 500 GKTMLVTESSLKGCLRTANKILTRRGDEKGVVVITGSLHIVSSVLASITG 549
GKT+L T LKGCLR+AN+IL+RRGDEK V+V TGSLHI +SVLAS+ G
Sbjct: 480 GKTVLATVPCLKGCLRSANQILSRRGDEKRVIVFTGSLHIAASVLASLAG 529
>Glyma14g31620.1
Length = 586
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/283 (80%), Positives = 250/283 (88%), Gaps = 4/283 (1%)
Query: 20 QMGSLRTMCSRQEDPEMKDLLDYIDSLKNYEKSGVPTGAGTDSDDGFDLRRMTRLMDHFG 79
++G +RT+ S E MKD LDY+DSLKNYEKSGVP GAGTDS DGFDL RM LM+ FG
Sbjct: 13 RVGPIRTLSSHSE---MKDFLDYLDSLKNYEKSGVPKGAGTDSSDGFDLGRMRCLMERFG 69
Query: 80 NPHSKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTS-PHIQTIRERILLGRSGDPV 138
NPHSKFKAVHIAGTKGK STAAF+SNILR EGYSVGCYTS PHI TIRERILLG+SG V
Sbjct: 70 NPHSKFKAVHIAGTKGKASTAAFVSNILRNEGYSVGCYTSSPHILTIRERILLGKSGHLV 129
Query: 139 SAKLLNGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARD 198
SAKLLN LF RIK D+DQA+K+ENGCISHFEVFT MAF+LFA+ENVD AVIEAGLGGARD
Sbjct: 130 SAKLLNDLFRRIKPDIDQAMKEENGCISHFEVFTTMAFLLFADENVDFAVIEAGLGGARD 189
Query: 199 ATNIISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERI 258
ATNIISSSGL A+VITTVGEEHLAALGGSLETIAMAKAGIIKQ PLVLGGPF+PHIERI
Sbjct: 190 ATNIISSSGLVASVITTVGEEHLAALGGSLETIAMAKAGIIKQDRPLVLGGPFVPHIERI 249
Query: 259 IQDKAITLDSPVVSACDTGNRCHIKSFSIHNGRPCQICDIEIQ 301
I+DKA+ ++SPVVSA DTGN+C +KSFSI NGRPCQICDI IQ
Sbjct: 250 IRDKAVAMNSPVVSAYDTGNKCTMKSFSILNGRPCQICDILIQ 292
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/229 (71%), Positives = 177/229 (77%), Gaps = 27/229 (11%)
Query: 321 GDHQLQNAATATCVALCLRNLGWRISDESIRSGLEHTYLVGRSQFLTSEEAEVLGLAGIT 380
GDHQLQNAATATCVAL LRNLGW ISD+SIR GLE TYL+GRSQFLTSEEAEVLGL G T
Sbjct: 385 GDHQLQNAATATCVALVLRNLGWSISDKSIRYGLEDTYLLGRSQFLTSEEAEVLGLTGST 444
Query: 381 VLLDGAHTKESAKALINTIRMAFPKARFAFVVAMANDKDHVGFAREVLSGVHAETVLLTE 440
VLLDGAHTKESAKAL+NTIRMAFPKA+ FVVAMA+DKDHVGFARE+LSGVH ETV+LTE
Sbjct: 445 VLLDGAHTKESAKALMNTIRMAFPKAQLVFVVAMASDKDHVGFAREILSGVHVETVVLTE 504
Query: 441 ANIAGDVTRTTPASSLRDSWIKASEELGIGICHXXXXXXXXXXXXXXQSVSSESNLGDDG 500
A IAG VTRTTPAS LRDSWIKAS ELGIGI H DG
Sbjct: 505 AAIAGGVTRTTPASLLRDSWIKASGELGIGIVH-------------------------DG 539
Query: 501 KTMLVTESSLKGCLRTANKILTRRGDEKGVVVITGSLHIVSSVLASITG 549
M + GCLRTAN+IL+RRGDEK V+V TGSLHI +SVLAS+ G
Sbjct: 540 --MAEYTIWVMGCLRTANQILSRRGDEKRVIVFTGSLHIAASVLASLAG 586
>Glyma14g07100.1
Length = 383
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 154/357 (43%), Gaps = 62/357 (17%)
Query: 64 DGFDLRRMTRLMDHFGNPHSKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQ 123
D F L M P + K +H+AGTKGKGST F +ILR G+ G +TSPH+
Sbjct: 21 DQFSLLYDYLKMLDLEEPIANMKIIHVAGTKGKGSTCTFTESILRNCGFRTGLFTSPHLI 80
Query: 124 TIRERILLGRSGDPVSAKLLNGL---FHRIKQDLDQAIKKENGCISHFEVFTAMAFILFA 180
IRER L + K L + R+K+ D I ++F +AF +FA
Sbjct: 81 DIRERFRLD-GMEICEEKFLAYFWWCYDRLKEKTDDNIPMP----TYFRFLALVAFKIFA 135
Query: 181 EENVDIAVIEAGLGGARDATNIISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIK 240
E VD+A++E GLGG DATN++ S + IT++G +H+ LG +L IA KAGI K
Sbjct: 136 AEQVDVAIMEVGLGGKYDATNVVQSPIVCG--ITSLGYDHMEILGNTLGEIAGEKAGIFK 193
Query: 241 QGCPLVLGGPFLPHIERIIQDKAITLDSP--VVSACDTGNRCHIKSFSIHNGRPCQICDI 298
P P ++++KA L+ P VV+ D + NG
Sbjct: 194 NRIP-AFTVPQPDEAMHVLEEKASLLNVPLQVVTPLDA---------KLLNG-------- 235
Query: 299 EIQIMXXXXXXXXXXXXXXQMPGDHQLQNAATATCVALC---LRNLGWRISD-------- 347
+ G+HQ NA A +ALC L+ G + D
Sbjct: 236 ----------------LRLGLEGEHQYLNAGLA--IALCFTWLKRTG-HVGDIYMEQTDT 276
Query: 348 --ESIRSGLEHTYLVGRSQFLTSEEAEVLGLAGITVLLDGAHTKESAKALINTIRMA 402
E GL L GR+Q + + + + LDGAH+ ES + +A
Sbjct: 277 LPEQFVKGLTSASLQGRAQIVPDQHIKSERSNELVFFLDGAHSPESMEVCARWFSLA 333
>Glyma02g34760.1
Length = 630
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 149/341 (43%), Gaps = 61/341 (17%)
Query: 83 SKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKL 142
+K +H+AGTKGKGST F ILR G+ G +TSPH+ +RER + G +S
Sbjct: 124 NKLNIIHVAGTKGKGSTCIFCEAILRECGFRTGVFTSPHLIDVRERFRI--DGIDISEDK 181
Query: 143 LNGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDATNI 202
F L++ ++ F T +AF +F E VD A+IE GLGG D+TN+
Sbjct: 182 FLQYFWDCWNRLEENTTEQLSMPPLFLFLTILAFKIFISEQVDAAIIEVGLGGKEDSTNV 241
Query: 203 ISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERIIQDK 262
I + IT++G +H LG +L IA KAGI K P P P +I ++
Sbjct: 242 IKEPTVCG--ITSLGMDHTEILGDTLGQIASHKAGIFKPKVP-AFTVPQPPEAMDVILER 298
Query: 263 AITLDSPVVSACDTGNRCHIKSFSIHNGRPC-QICDIEIQIMXXXXXXXXXXXXXXQMPG 321
A L P+ + C Q+ +E+ + G
Sbjct: 299 AKELMVPL---------------EVTEPFDCKQMKGLEL-----------------GLSG 326
Query: 322 DHQLQNAATATCVALCL--RNLGW--------RISDESIRSGLEHTYLVGRSQFL----- 366
DHQ NAA A ++ C R W + DE IR GL + GR+Q +
Sbjct: 327 DHQFYNAALAVSLSRCWLQRTGNWGKKYQKDSNLPDEFIR-GLSTAHFSGRAQIVYDSSP 385
Query: 367 TSEEAEVLGL---AGITVLLDGAHTKES----AKALINTIR 400
S+ +E+L + LDGAH+ ES AK N ++
Sbjct: 386 NSDCSEILSKNCGGELIFYLDGAHSPESMETCAKWFSNAVK 426
>Glyma10g16410.1
Length = 547
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 153/363 (42%), Gaps = 61/363 (16%)
Query: 83 SKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKL 142
++ +H+AGTKGKGST F ILR G+ G +TSPH+ +RER + G +S
Sbjct: 40 NRLNIIHVAGTKGKGSTCIFCEAILRECGFRTGVFTSPHLIDVRERFRI--DGIDISEGK 97
Query: 143 LNGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDATNI 202
F L++ ++ F T +AF +F E VD A+IE GLGG D+TN+
Sbjct: 98 FLQYFWDCWNRLEENTTEQLSMPPLFLFLTILAFKIFISEQVDAAIIEVGLGGKEDSTNV 157
Query: 203 ISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERIIQDK 262
I + IT++G +H LG ++ IA KAGI K P P P +I ++
Sbjct: 158 IKEPTVCG--ITSLGMDHTEILGDTIGQIASHKAGIFKPKVP-AFTVPQPPEAMDVILER 214
Query: 263 AITLDSPVVSACDTGNRCHIKSFSIHNGRPC-QICDIEIQIMXXXXXXXXXXXXXXQMPG 321
A L P+ + C QI +E+ + G
Sbjct: 215 AKELMVPL---------------EVTEPFDCKQIKGLEL-----------------GLSG 242
Query: 322 DHQLQNAATATCVALCL--RNLGW--------RISDESIRSGLEHTYLVGRSQ-----FL 366
DHQ NAA A ++ C R W + E IR GL Y GR+Q +
Sbjct: 243 DHQFYNAALAVSLSRCWLQRTGNWGEKYQNDSNLPHEFIR-GLSTAYFSGRAQIVYDSYP 301
Query: 367 TSEEAEVLGL---AGITVLLDGAHTKES----AKALINTIRMAFPKARFAFVVAMANDKD 419
S+ +E+ + LDGAH+ ES AK N +R +F V A +
Sbjct: 302 NSDGSEIFSKNYGGELIFYLDGAHSPESMEACAKWFSNAVRRYEILPHLSFKVENAEESS 361
Query: 420 HVG 422
G
Sbjct: 362 ENG 364
>Glyma18g03820.1
Length = 475
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 164/374 (43%), Gaps = 68/374 (18%)
Query: 83 SKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAK- 141
S K +H+AGTKGKGST F +ILR G+ G +TSPH+ IRER L G +S +
Sbjct: 60 SNMKIIHVAGTKGKGSTCTFTESILRNCGFRTGLFTSPHLIDIRERFRL--DGVEISEEK 117
Query: 142 ---LLNGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARD 198
+ R+K++ D + + F +AF +FA E VD++++E GLGG D
Sbjct: 118 FLVYFWWCYDRLKENTDDNVPMP----TFFHFLALLAFKIFAAEQVDVSIMEVGLGGKYD 173
Query: 199 ATNIISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERI 258
ATN++ + + IT++G +H+ LG +L IA KAGI K P P +
Sbjct: 174 ATNVVPTPIVCG--ITSLGYDHMEILGNTLGEIAGEKAGIFKHRIP-AFTVPQPDEAMHV 230
Query: 259 IQDKAITLDSP--VVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXXX 316
+++KA L P VV+ D + NG
Sbjct: 231 LREKASQLKVPLQVVTPLDA---------KLLNG------------------------SR 257
Query: 317 XQMPGDHQLQNAATATCVALC--------------LRNLGWRISDESIRSGLEHTYLVGR 362
+ G+HQ NA A +ALC L+++ + ++ I+ GL L GR
Sbjct: 258 LALGGEHQYINAGLA--IALCSTWLKMNGHLEDSYLKHMQHTLPEKFIK-GLTTASLQGR 314
Query: 363 SQFLTSEEAEVLGLAGITVLLDGAHTKESAKALINTIRMAFPKARFAFVVAMANDKDHVG 422
+Q + + + LDGAH+ ES +A +A + D+
Sbjct: 315 AQIVPDQFINDEIPNELVFFLDGAHSPESMEACARWFSLAIKDQD---QILFHQKLDNSN 371
Query: 423 FAREVLSGVHAETV 436
F+ +V+ + ETV
Sbjct: 372 FSNQVVKMHNGETV 385
>Glyma13g08780.1
Length = 185
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 76/126 (60%), Gaps = 23/126 (18%)
Query: 348 ESIRSGLEHTYLVGRSQFLTSEEAEVLGLAGITVLLDGAHTKESAKALINTIRMAFPKAR 407
++ S L HTYL+GR QFLTSEEAEVL L G TVLLDGAHTK+SA+ L+NTIRMAFP+A+
Sbjct: 39 DTASSFLHHTYLLGRIQFLTSEEAEVLELTGATVLLDGAHTKDSAQDLMNTIRMAFPEAQ 98
Query: 408 FAFVVAMANDKDHVGFAREVLSGVHAETVLLTEANIAGDVTRTTPASSLRDSWIKASEEL 467
FVVAMA T + + P+ DSWIKAS+EL
Sbjct: 99 LVFVVAMA-----------------------TYSTSGERIGLNMPSHLFGDSWIKASDEL 135
Query: 468 GIGICH 473
IGI H
Sbjct: 136 HIGIVH 141
>Glyma02g41870.1
Length = 504
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 143/363 (39%), Gaps = 91/363 (25%)
Query: 64 DGFDLRRMTRLMDHFGNPHSKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQ 123
D F L M P + K +H+AGTKGKGST F +ILR G+ G +TSPH+
Sbjct: 21 DQFSLLYDYLKMLELEEPIANMKVIHVAGTKGKGSTCTFTESILRNCGFRTGLFTSPHLI 80
Query: 124 TIRERILLGRSGDPVSAKLLNGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEEN 183
IRER L +G E F A + +
Sbjct: 81 DIRERFRL------------------------------DGMEICEEKFLAYFWWCYDRLK 110
Query: 184 VDIAVIEAGLGGARDATNI--ISSSGLAAAV-------ITTVGEEHLAALGGSLETIAMA 234
VD+A++E GLGG DATN+ + ++ L V IT++G +H+ LG +L IA
Sbjct: 111 VDVAIMEVGLGGKYDATNVEQVHAAVLIFQVQAPIVCGITSLGYDHMEILGNTLGEIAGE 170
Query: 235 KAGIIKQGCPLVLGGPFLPHIERIIQDKAITLDSP--VVSACDTGNRCHIKSFSIHNGRP 292
KAGI K P P ++++KA L+ P V++ D + NG
Sbjct: 171 KAGIFKNRIP-AFTVPQPDEAMHVLEEKASQLNVPLQVLTPLDA---------KLLNG-- 218
Query: 293 CQICDIEIQIMXXXXXXXXXXXXXXQMPGDHQLQNAATATCVALC---LRNLGWRISD-- 347
+ G+HQ NA A +ALC L+ G + D
Sbjct: 219 ----------------------LRLGLEGEHQYLNAGLA--IALCFTWLKRTG-HVGDIN 253
Query: 348 --------ESIRSGLEHTYLVGRSQFLTSEEAEVLGLAGITVLLDGAHTKESAKALINTI 399
E GL L GR+Q + + + + LDGAH+ ES +
Sbjct: 254 LEQTDTLPEQFIKGLTSASLQGRAQIVPDQHIKSERSNELVFFLDGAHSPESMEVCARWF 313
Query: 400 RMA 402
+A
Sbjct: 314 SLA 316