Miyakogusa Predicted Gene

Lj2g3v3339370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339370.1 Non Chatacterized Hit- tr|Q6RF54|Q6RF54_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,60.34,0.00000000008,seg,NULL,gene.g44681.t1.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g47760.1                                                       233   5e-62
Glyma14g00860.1                                                       219   9e-58
Glyma02g47760.2                                                       197   2e-51

>Glyma02g47760.1 
          Length = 163

 Score =  233 bits (594), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 115/155 (74%), Positives = 126/155 (81%), Gaps = 3/155 (1%)

Query: 1   MVSGRDQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSPSQVLVYDFQP 60
           MV GRD+VYVAAMPLRA KGPPQLLMSAAY+LN+WD QHFMVIIKP SS SQVLV+DFQP
Sbjct: 10  MVRGRDEVYVAAMPLRATKGPPQLLMSAAYSLNLWDFQHFMVIIKP-SSLSQVLVFDFQP 68

Query: 61  IDPEDIYVALAVLSGRAVPGAXXXXXXXXXXXXXCWLVGY--ANSNAVEIASEYNKIWET 118
            DPEDIYVALA L GRAVPG              CWLVGY  A ++A+EIA E+NK WET
Sbjct: 69  KDPEDIYVALAALYGRAVPGTVLVRQLKKLPRNKCWLVGYSKAEADAMEIAREFNKEWET 128

Query: 119 NLRIGLNDCRNYTNGLVRQLTGESDVLKRLRNLGS 153
           NLRIGL+DCR+YTN LVRQLTGE DVLKRLRN+GS
Sbjct: 129 NLRIGLHDCRDYTNSLVRQLTGEKDVLKRLRNVGS 163


>Glyma14g00860.1 
          Length = 156

 Score =  219 bits (558), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 111/155 (71%), Positives = 122/155 (78%), Gaps = 10/155 (6%)

Query: 1   MVSGRDQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSPSQVLVYDFQP 60
           M+ GRD+VY AAMPLRA K PPQLLMSAAY+LN WD QHFMVIIKP SSPSQVL +DFQP
Sbjct: 10  MIRGRDEVYAAAMPLRATKRPPQLLMSAAYSLNFWDFQHFMVIIKP-SSPSQVLGFDFQP 68

Query: 61  IDPEDIYVALAVLSGRAVPGAXXXXXXXXXXXXXCWLVGY--ANSNAVEIASEYNKIWET 118
            DPEDIYVALA L+GRAVPG              CWLVGY  A ++AVEIA E+NK WET
Sbjct: 69  KDPEDIYVALAALNGRAVPGTVLPRNK-------CWLVGYSKAEADAVEIAREFNKEWET 121

Query: 119 NLRIGLNDCRNYTNGLVRQLTGESDVLKRLRNLGS 153
           NLRIGL+DC +YTN LV QLTGE DVLKRLRN+GS
Sbjct: 122 NLRIGLHDCHDYTNTLVWQLTGEKDVLKRLRNIGS 156


>Glyma02g47760.2 
          Length = 162

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/151 (66%), Positives = 114/151 (75%), Gaps = 5/151 (3%)

Query: 1   MVSGRDQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSPSQVLVYDFQP 60
           MV GRD+VYVAAMPLRA KGPPQLLMSAAY+LN+WD QHFMVIIKP SS SQVLV+DFQP
Sbjct: 10  MVRGRDEVYVAAMPLRATKGPPQLLMSAAYSLNLWDFQHFMVIIKP-SSLSQVLVFDFQP 68

Query: 61  IDPEDIYVALAVLSGRAVPGAXXXXXXXXXXXXXCWLVGY--ANSNAVEIASEYNKIWET 118
            DPEDIYVALA L GRAVPG              CWLVGY  A ++A+EIA E+NK WET
Sbjct: 69  KDPEDIYVALAALYGRAVPGTVLVRQLKKLPRNKCWLVGYSKAEADAMEIAREFNKEWET 128

Query: 119 NLRIGLNDCRNYTNG--LVRQLTGESDVLKR 147
           NLRIGL+DCR+YTN   L + L   S  ++R
Sbjct: 129 NLRIGLHDCRDYTNSKNLFQTLCCLSPFMER 159