Miyakogusa Predicted Gene

Lj2g3v3339160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339160.1 Non Chatacterized Hit- tr|I1M679|I1M679_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27224
PE,85.33,0,NUP_C,Peptidase S59, nucleoporin; NUCLEOPORIN,NULL;
Nup96,Nuclear protein 96; Nucleoporin2,Peptidase,CUFF.40245.1
         (962 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g00880.1                                                      1684   0.0  
Glyma12g36350.1                                                       146   9e-35
Glyma13g33910.1                                                       139   1e-32
Glyma10g31520.1                                                        96   2e-19

>Glyma14g00880.1 
          Length = 989

 Score = 1684 bits (4360), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 798/935 (85%), Positives = 864/935 (92%), Gaps = 1/935 (0%)

Query: 28  MTGIEASLPVLLSPGYYTKPSLKELRARELVDPGYCSRVPDFTVGRFGYGFVRFLSETDV 87
           MT  EASLP+L S GYYTKPSLKEL ARELV+PGYCSRVPDFTVGRFGYG+VR+L+ETDV
Sbjct: 1   MTETEASLPILNSSGYYTKPSLKELVARELVEPGYCSRVPDFTVGRFGYGYVRYLNETDV 60

Query: 88  RGLGLDEIVEFHRHEVVVYGDENDKPEVGEGLNKAAEVVLVLDSGMLKSREWGEDVLVKK 147
           RGL +DEIV+FHRHE+VVY DENDKP VG+GLNKAAEVVLVLDS +LKS+E  EDV+V K
Sbjct: 61  RGLRIDEIVKFHRHEIVVYSDENDKPAVGQGLNKAAEVVLVLDSEILKSKEGKEDVMVSK 120

Query: 148 LKQIAERQGAKFVSFDAVTGEWKFMVQHFSRFGFGDDDEEDIVMNDAEIYDAEKESPIDT 207
           LKQI +RQ A+F+SFD VTGEWKF+V HFSRFGFGDDDEEDI M+DAE+YD EKESP +T
Sbjct: 121 LKQITKRQKAQFISFDLVTGEWKFLVGHFSRFGFGDDDEEDIAMDDAEVYDVEKESPSNT 180

Query: 208 DGLELSHSLPAHLRLDPVKMKEMRLLMFHDEEEDMEDSDQKSSSGKEYVRPLQRSAQEVT 267
           + LELSHSLP+HLRLDPVKM+EMRLLMF DEEE +ED   KSSSGK+YVRPLQ SAQ + 
Sbjct: 181 NELELSHSLPSHLRLDPVKMREMRLLMFPDEEE-VEDLSCKSSSGKQYVRPLQSSAQAIN 239

Query: 268 HRSTPPTVRKTPFPLLEYKRGNFDSDSPGAILMAQQHKGMPLRTVKAQGFKLDLKHETPV 327
           HRSTPP  RKTPFPLLEYK GNFDS+SPG ILM QQHKGMPLRT+K+QGFKLDLKHETPV
Sbjct: 240 HRSTPPVARKTPFPLLEYKHGNFDSNSPGGILMVQQHKGMPLRTIKSQGFKLDLKHETPV 299

Query: 328 SGNYAHNIVDAGLFMGKSFRVGWGPNGVLVHSGAPVGSGGSHTLLSSVINLEKVAFDNSV 387
           SGNYAHNIVDAGLFMGKSFRVGWGPNG+LVHSGAPVGS G+H LLSSV+NLEKVAFDN V
Sbjct: 300 SGNYAHNIVDAGLFMGKSFRVGWGPNGILVHSGAPVGSSGNHKLLSSVVNLEKVAFDNVV 359

Query: 388 RDENKKVSEELVDSALVSPLNFHKGINHVMKEVEIGHCKLTLQKLEADRTTLSEISHQYC 447
           RDENKKV+EEL+D ALVSPLNFHKGINHVMKEVEIG CKLTLQKLEA+R+TLSEISH YC
Sbjct: 360 RDENKKVTEELIDHALVSPLNFHKGINHVMKEVEIGPCKLTLQKLEANRSTLSEISHHYC 419

Query: 448 DVIERQLSVPGLSSSARLGLTHQVMTWELIRVLFADRRPKSPVESLGADNEEDMMQDTKE 507
           D+IERQLSVPGLSS+ RLGLTHQVMTWELIRVLF+DR  K  VESLGADNEEDMMQD KE
Sbjct: 420 DLIERQLSVPGLSSTTRLGLTHQVMTWELIRVLFSDREQKGQVESLGADNEEDMMQDIKE 479

Query: 508 VSQDVDQEALPLMRRAEFSYWLRESVSYHVQNQISSLNDSHYLEHIFLLLTGRQLDEAVQ 567
           + QDVD+EALPLMRRAEFSYWLRESVSYHVQNQISSLNDS YL+HIF+LLTGRQLDEAVQ
Sbjct: 480 ICQDVDREALPLMRRAEFSYWLRESVSYHVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQ 539

Query: 568 LAVSKGDVRLACLLSQAGGSTVNRSDIARQLDVWRNKGLDFSFIEKDRLRLYELLSGNVH 627
           LAVSKGDVRLACLLSQAGGSTVNRSDIARQLD+WRNKGLDFSFIEKDRLRLYELL+GN+H
Sbjct: 540 LAVSKGDVRLACLLSQAGGSTVNRSDIARQLDIWRNKGLDFSFIEKDRLRLYELLAGNIH 599

Query: 628 DALHDIKIDWRRFLGLLTWYKLPPDTSLSITFQTYKHFLDEGAAPYPVPLFIDEGTPEEA 687
           DALHD+KIDWRRFLGLL WYKLPP+TSL I FQTYKHF+DEG APYPVPLFIDEGT EE 
Sbjct: 600 DALHDVKIDWRRFLGLLMWYKLPPNTSLPIAFQTYKHFVDEGTAPYPVPLFIDEGTSEEV 659

Query: 688 VSWKADKHFDISFYLMLLHASEEKEFSSLKAMFSAFSSTPDPLDYHMIWHQREVLEAVGV 747
           +SW  D HFDISFYLMLLHA+EE +FS LKAMFSAFSSTPDPLDYHMIWHQR VLEAVGV
Sbjct: 660 ISWNTDNHFDISFYLMLLHANEETKFSFLKAMFSAFSSTPDPLDYHMIWHQRAVLEAVGV 719

Query: 748 ISSNDLHILDMGFVSQLLCLGKCHWAIYVVLHLPLREDYPYLHVNLIREILFQYCETWSS 807
           I+SNDLHILDM FVSQLLC+GKCHWA+YVVLHLPLREDYPYLHVNLIREILFQYCETWSS
Sbjct: 720 INSNDLHILDMSFVSQLLCVGKCHWALYVVLHLPLREDYPYLHVNLIREILFQYCETWSS 779

Query: 808 DESQYRFIEDLGIPTEWMHEALAIYHNYNGNLSEALEQFLQCANWQKAHTIFITSVAHKL 867
           DESQ +FIEDLGIPT+WMHEALAIY+NYNG+ S+AL+QFLQCANWQKAH IFITSVAH+L
Sbjct: 780 DESQQQFIEDLGIPTDWMHEALAIYYNYNGDHSKALDQFLQCANWQKAHAIFITSVAHRL 839

Query: 868 FLEDKHTEIWRIATYMEDHKSEIENWELGAGIYISFYLMRNSLQGDADAMTEMDSLQSKN 927
           FL+ KH EIWRIAT MEDHKSEIENWELGAGIYISFYLMRNSLQ D +AMTE+DSL+SKN
Sbjct: 840 FLQAKHAEIWRIATSMEDHKSEIENWELGAGIYISFYLMRNSLQDDTNAMTELDSLESKN 899

Query: 928 AACQSFVSQLNESLAVWGVRLPVDARVVYSKMGGE 962
           AACQ FVSQLNESLAVWG RLPVDARVVYS+M GE
Sbjct: 900 AACQDFVSQLNESLAVWGCRLPVDARVVYSRMAGE 934


>Glyma12g36350.1 
          Length = 1055

 Score =  146 bits (369), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 10/187 (5%)

Query: 13   VLHSCKKRRVSECCVM----TGIEASLPVLLSPGYYTKPSLKELRARELVDPGYCSRVPD 68
            V  + +  R  E  ++      +EA +P L    YYT P + EL A+E  +PG+CS V D
Sbjct: 865  VYKTLRGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKD 924

Query: 69   FTVGRFGYGFVRFLSETDVRGLGLDEIVEFHRHEVVVYGDENDKPEVGEGLNKAAEVVLV 128
            F VGR GYG +RFL ETD+RGL L+ +++F+  EV+VY D++ KP VG+GLNK AEV L+
Sbjct: 925  FVVGRQGYGSIRFLGETDIRGLDLESLIQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLL 984

Query: 129  LDSGMLK--SREWGEDVLVKKLKQIAER----QGAKFVSFDAVTGEWKFMVQHFSRFGFG 182
                  K    ++ E   ++K K++ +R    QGA+FVS+D   GEWK  V HFS +   
Sbjct: 985  NIKCFDKKTGHQYTEGPKIEKYKEMLKRKTEDQGAEFVSYDPTKGEWKIRVSHFSIYKLV 1044

Query: 183  DDDEEDI 189
            +D+   I
Sbjct: 1045 EDENSRI 1051


>Glyma13g33910.1 
          Length = 1038

 Score =  139 bits (350), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 104/177 (58%), Gaps = 14/177 (7%)

Query: 13   VLHSCKKRRVSECCVM----TGIEASLPVLLSPGYYTKPSLKELRARELVDPGYCSRVPD 68
            V  +    R  E  ++      +EA +P L    YYT P + EL A+E  +PG+CS V D
Sbjct: 848  VYKTLSGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKD 907

Query: 69   FTVGRFGYGFVRFLSETDVRGLGLDEIVEFHRHEVVVYGDENDKPEVGEGLNKAAEVVLV 128
            F VGR GYG +RFL ETDVR L L+ +++F+  EV+VY D+  KP VG+GLNK AEV L+
Sbjct: 908  FVVGRQGYGSIRFLGETDVRRLDLESLIQFNNREVIVYMDDLKKPPVGQGLNKPAEVTLL 967

Query: 129  ----LDSGMLKSREWGEDVLVKK----LKQIAERQGAKFVSFDAVTGEWKFMVQHFS 177
                 D       ++ E   ++K    LK+ AE QGA+F+S+D   GEWK  V HFS
Sbjct: 968  NIKCFD--KKTGHQYTEGPKIEKYKEMLKRKAEDQGAEFLSYDPTKGEWKIRVSHFS 1022


>Glyma10g31520.1 
          Length = 722

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 5/113 (4%)

Query: 32  EASLPVLLSPGYYTKPSLKELRARELVDPGYCSRVPDFTVGRFGYGFVRFLSETDVRGLG 91
           E  +P L    Y T P + E  A+E  +PG+C  V DF +GR GYG +RFL ETDVRG  
Sbjct: 589 EVLMPKLRRSDYCTLPRMPEPVAKERAEPGFCCHVEDFMLGRQGYGSIRFLGETDVRGQA 648

Query: 92  LDEIVEFHRHEVVVYGDENDKPEVGEGLNKAAEVVLVLDSGMLK-----SREW 139
           L+ +V+F+   V+ Y D + KP VG+GLNK AE  +       +     SREW
Sbjct: 649 LESLVQFNTRGVIAYMDNSTKPPVGQGLNKLAETSVFRRGQRSRNTRRCSREW 701