Miyakogusa Predicted Gene

Lj2g3v3319250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3319250.1 Non Chatacterized Hit- tr|G7K4T5|G7K4T5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,51.9,2e-18,
,gene.g44568.t1.1
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01460.1                                                       118   1e-27
Glyma02g47300.1                                                       115   7e-27
Glyma18g08160.1                                                       103   6e-23
Glyma15g35140.1                                                        52   2e-07

>Glyma14g01460.1 
          Length = 230

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 66/75 (88%)

Query: 16  LISSKSIKPFSQRLGETRLQSVQFMSSLVFLPQDVGVKLQRQVQSNRINYNARGTFKERF 75
           L+SS++IKPF+QR  ETRLQSV  +SSLVFLPQDVGVKLQRQV++NR+NYNARGTFK RF
Sbjct: 135 LVSSQTIKPFTQRPRETRLQSVNLISSLVFLPQDVGVKLQRQVENNRVNYNARGTFKVRF 194

Query: 76  YMDLVHLSYWLHSIC 90
            + LVHLSY L+S C
Sbjct: 195 NIGLVHLSYSLYSTC 209


>Glyma02g47300.1 
          Length = 230

 Score =  115 bits (289), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 66/77 (85%)

Query: 16  LISSKSIKPFSQRLGETRLQSVQFMSSLVFLPQDVGVKLQRQVQSNRINYNARGTFKERF 75
           L+SS++IKPF+QR  E RLQSV  +SSLVFLPQDVGVKLQRQV++NR+NYNARGTFK RF
Sbjct: 135 LVSSQTIKPFTQRPRENRLQSVNLISSLVFLPQDVGVKLQRQVENNRVNYNARGTFKVRF 194

Query: 76  YMDLVHLSYWLHSICYL 92
            + L+HLSY L+S C +
Sbjct: 195 NVGLIHLSYSLYSTCQI 211


>Glyma18g08160.1 
          Length = 258

 Score =  103 bits (256), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 61/77 (79%)

Query: 16  LISSKSIKPFSQRLGETRLQSVQFMSSLVFLPQDVGVKLQRQVQSNRINYNARGTFKERF 75
           +IS++SI+PF+QR  E+RL+S+ F+SSLVFLP+D+GV L+ QVQ NR+ YN RGTFK R 
Sbjct: 163 IISTQSIEPFTQRRRESRLESLHFISSLVFLPKDLGVNLKGQVQGNRVKYNVRGTFKVRV 222

Query: 76  YMDLVHLSYWLHSICYL 92
            M   HLSYWLHS C +
Sbjct: 223 SMGFFHLSYWLHSRCQI 239


>Glyma15g35140.1 
          Length = 88

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 28/35 (80%)

Query: 56 RQVQSNRINYNARGTFKERFYMDLVHLSYWLHSIC 90
          RQV++NR+ YNARGTFK RF   LVHLSY L+S C
Sbjct: 42 RQVENNRVIYNARGTFKVRFNNGLVHLSYSLYSTC 76